Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06819_v3 Cicer arietinum L. HOM05D005710 ORTHO05D004657 1.1e-125 453.4 240 100.0
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 6.4e-81 304.7 244 73.0
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 9.2e-72 274.2 245 66.9
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 4.6e-71 271.9 249 67.1
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 3.9e-62 242.3 268 59.7
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 1.4e-59 233.8 264 57.2
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 7.6e-58 228.0 261 59.8
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 5.4e-56 221.9 261 59.0
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 8.1e-52 208.0 243 56.0
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 5.1e-46 188.7 276 48.6
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 1.4e-43 180.6 277 46.9
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 2.6e-42 176.4 262 50.0
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.5e-26 124.0 270 36.7
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 5.5e-24 115.5 262 35.9
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 6.1e-23 112.1 265 36.2
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.3e-22 110.9 258 38.4
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 5.1e-22 109.0 260 38.5
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.5e-21 107.5 253 36.8
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 7.4e-21 105.1 262 36.6
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 9.7e-21 104.8 263 35.7
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 1.7e-20 104.0 271 34.7
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 8.2e-20 101.7 261 37.2
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.1e-19 101.3 271 33.6
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 1.1e-19 101.3 246 35.8
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 1.4e-19 100.9 284 33.8
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 1.8e-19 100.5 271 36.9
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 5.3e-19 99.0 257 34.6
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 3.4e-18 96.3 268 35.4
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 5.9e-18 95.5 259 35.5
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 5.9e-18 95.5 266 35.3
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 1.0e-17 94.7 263 34.6
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 3.8e-17 92.8 256 35.9
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 3.8e-17 92.8 271 35.4
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.9e-16 90.5 249 32.9
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 4.2e-16 89.4 268 34.7
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 4.2e-16 89.4 250 32.8
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 1.6e-15 87.4 263 31.2
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.7e-15 85.9 283 29.7
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 6.1e-15 85.5 238 37.8
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 1.0e-14 84.7 270 32.6
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.4e-14 84.3 252 33.3
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.8e-14 84.0 251 31.5
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 3.0e-14 83.2 267 34.8
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 8.8e-14 81.6 250 31.2
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 5.7e-13 79.0 252 31.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 5.7e-13 79.0 199 36.7
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.7e-12 77.4 202 36.1
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 3.7e-12 76.3 267 30.7
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 4.1e-11 72.8 254 30.3
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 4.1e-11 72.8 269 34.6
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 1.5e-10 70.9 255 31.0
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.5e-10 70.9 206 32.5
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 2.6e-10 70.1 256 28.9
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 1.0e-09 68.2 217 32.7
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 1.0e-09 68.2 168 33.9
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.0e-09 68.2 255 31.0
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 1.7e-09 67.4 249 34.9
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 1.9e-08 63.9 276 30.1
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 2.5e-08 63.5 268 30.2
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 5.5e-08 62.4 256 27.3
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.6e-07 60.8 126 40.5
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.1e-07 60.5 243 31.3
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.1e-07 60.5 243 31.3
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 4.7e-07 59.3 260 27.7
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 8.0e-07 58.5 182 35.2
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 2.3e-06 57.0 196 30.6
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 3.9e-06 56.2 277 29.2


User provided reference genes

Program Settings