Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06797_v3 Cicer arietinum L. HOM05D000596 ORTHO05D013721 2.6e-70 268.5 125 100.0
Medtr7g011663 Medicago truncatula HOM05D000596 ORTHO05D002115 4.2e-60 234.6 128 88.3
Psat3g199080 Pisum sativum HOM05D000596 ORTHO05D002115 1.8e-55 219.2 126 78.6
Medtr7g011770 Medicago truncatula HOM05D000596 ORTHO05D002115 1.3e-53 213.0 127 82.7
Lj1g0023177 Lotus japonicus HOM05D000596 ORTHO05D002115 1.2e-49 199.9 126 75.4
Glyma.19G157000 Glycine max HOM05D000596 ORTHO05D002115 1.5e-49 199.5 129 71.3
Phvul.001G152100 Phaseolus vulgaris HOM05D000596 ORTHO05D002115 7.5e-49 197.2 125 72.0
Lalb_Chr20g0107801 Lupinus albus HOM05D000596 ORTHO05D002115 9.7e-49 196.8 129 75.2
VMungo1383G0895 Vigna mungo HOM05D000596 ORTHO05D002115 4.1e-47 191.4 125 72.0
Glyma.03G154700 Glycine max HOM05D000596 ORTHO05D002115 9.1e-47 190.3 129 69.8
TPR.G25566 Trifolium pratense HOM05D000596 ORTHO05D013721 1.7e-45 186.0 106 84.9
arahy.Tifrunner.gnm1.ann1.PN0N9Z Arachis hypogaea HOM05D000596 ORTHO05D002115 1.5e-44 183.0 130 70.0
arahy.Tifrunner.gnm1.ann1.YAY0HW Arachis hypogaea HOM05D000596 ORTHO05D002115 2.5e-44 182.2 132 68.2
Lj1g0018989 Lotus japonicus HOM05D000596 ORTHO05D002115 1.6e-43 179.5 125 71.2
Phvul.001G151900 Phaseolus vulgaris HOM05D000596 ORTHO05D002115 1.0e-26 123.6 128 48.4
VMungo1383G1529 Vigna mungo HOM05D000596 ORTHO05D002115 2.3e-26 122.5 128 48.4
Lalb_Chr20g0107791 Lupinus albus HOM05D000596 ORTHO05D002115 3.0e-26 122.1 129 51.9
Potri.005G210300 Populus trichocarpa HOM05D000596 ORTHO05D002115 3.0e-26 122.1 133 47.4
Potri.002G052100 Populus trichocarpa HOM05D000596 ORTHO05D002115 1.2e-25 120.2 130 46.2
QL12p021436 Quercus lobata HOM05D000596 ORTHO05D002115 1.2e-25 120.2 130 50.8
Sabra05G0160400 Salix brachista HOM05D000596 ORTHO05D002115 1.2e-25 120.2 154 42.9
Cpa.g.sc52.43 Carica papaya HOM05D000596 ORTHO05D002115 5.8e-25 117.9 130 45.4
Manes.01G207300 Manihot esculenta HOM05D000596 ORTHO05D002115 1.7e-24 116.3 126 44.4
Dinv34762 Davidia involucrata HOM05D000596 ORTHO05D002115 2.2e-24 115.9 129 43.4
Manes.05G077200 Manihot esculenta HOM05D000596 ORTHO05D002115 6.4e-24 114.4 126 46.0
arahy.Tifrunner.gnm1.ann1.HNK79X Arachis hypogaea HOM05D000596 ORTHO05D002115 2.4e-23 112.5 123 45.5
Glyma.03G154400 Glycine max HOM05D000596 ORTHO05D002115 2.4e-23 112.5 129 45.0
Duzib133G0476 Durio zibethinus HOM05D000596 ORTHO05D002115 4.1e-23 111.7 122 45.1
arahy.Tifrunner.gnm1.ann1.85ZU22 Arachis hypogaea HOM05D000596 ORTHO05D002115 5.4e-23 111.3 123 45.5
arahy.Tifrunner.gnm1.ann1.KA44CE Arachis hypogaea HOM05D000596 ORTHO05D002115 1.2e-22 110.2 115 47.8
Gorai.004G079500 Gossypium raimondii HOM05D000596 ORTHO05D002115 1.2e-22 110.2 126 44.4
Gohir.D08G075200 Gossypium hirsutum HOM05D000596 ORTHO05D002115 2.0e-22 109.4 125 43.2
Dinv32926 Davidia involucrata HOM05D000596 ORTHO05D002115 6.0e-22 107.8 116 45.7
CiPaw.07G091000 Carya illinoinensis HOM05D000596 ORTHO05D002115 7.8e-22 107.5 132 45.5
HanXRQChr10g0282621 Helianthus annuus HOM05D000596 ORTHO05D002115 7.8e-22 107.5 123 41.5
arahy.Tifrunner.gnm1.ann1.L13Y3X Arachis hypogaea HOM05D000596 ORTHO05D002115 3.0e-21 105.5 127 44.1
Medtr7g094970 Medicago truncatula HOM05D000596 ORTHO05D002115 3.0e-21 105.5 125 45.6
Ciclev10018875m.g Citrus clementina HOM05D000596 ORTHO05D002115 3.9e-21 105.1 129 45.7
Gohir.A08G066500 Gossypium hirsutum HOM05D000596 ORTHO05D002115 3.9e-21 105.1 126 42.9
Thecc.01G277500 Theobroma cacao HOM05D000596 ORTHO05D002115 3.9e-21 105.1 130 42.3
ECA247G2295 Erigeron canadensis HOM05D000596 ORTHO05D002115 6.6e-21 104.4 123 42.3
Gohir.D11G128500 Gossypium hirsutum HOM05D000596 ORTHO05D002115 8.6e-21 104.0 126 44.4
Duzib211G0501 Durio zibethinus HOM05D000596 ORTHO05D002115 1.1e-20 103.6 126 43.7
Lsat_1_v5_gn_9_3541 Lactuca sativa HOM05D000596 ORTHO05D002115 1.1e-20 103.6 121 41.3
Sed0019179 Sechium edule HOM05D000596 ORTHO05D002115 1.1e-20 103.6 126 43.7
Duzib138G1316 Durio zibethinus HOM05D000596 ORTHO05D002115 1.5e-20 103.2 127 42.5
Gorai.007G137400 Gossypium raimondii HOM05D000596 ORTHO05D002115 1.5e-20 103.2 126 44.4
arahy.Tifrunner.gnm1.ann1.C5WNZ8 Arachis hypogaea HOM05D000596 ORTHO05D002115 1.9e-20 102.8 115 46.1
TPR.G9922 Trifolium pratense HOM05D000596 ORTHO05D002115 3.3e-20 102.1 129 44.2
COL.COLO4_09082 Corchorus olitorius HOM05D000596 ORTHO05D002115 4.3e-20 101.7 129 41.1
Sabra02G0042200 Salix brachista HOM05D000596 ORTHO05D002115 4.3e-20 101.7 161 36.6
CsaV3_6G037230 Cucumis sativus L. HOM05D000596 ORTHO05D002115 5.6e-20 101.3 124 44.4
Atru.chr5.1453 Acer truncatum HOM05D000596 ORTHO05D002115 7.3e-20 100.9 128 44.5
ClCG07G000310 Citrullus lanatus HOM05D000596 ORTHO05D002115 7.3e-20 100.9 126 43.7
HanXRQChr03g0061811 Helianthus annuus HOM05D000596 ORTHO05D002115 9.5e-20 100.5 123 39.8
FAN15G2683 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.2e-19 100.1 129 40.3
Migut.D00306 Erythranthe guttata HOM05D000596 ORTHO05D002115 1.6e-19 99.8 127 42.5
Gohir.A11G123300 Gossypium hirsutum HOM05D000596 ORTHO05D002115 1.6e-19 99.8 126 43.7
MD03G1263500 Malus domestica HOM05D000596 ORTHO05D002115 1.6e-19 99.8 117 41.0
TWI59G1243 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 1.6e-19 99.8 136 44.1
Cfa006150 Carpinus fangiana HOM05D000596 ORTHO05D002115 2.1e-19 99.4 117 44.4
TWI59G0068 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 2.1e-19 99.4 137 43.1
CANSAT25G3448 Cannabis sativa HOM05D000596 ORTHO05D002115 2.8e-19 99.0 126 42.1
TWI59G1004 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 2.8e-19 99.0 137 43.1
vmacro14646 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 2.8e-19 99.0 123 42.3
Oeu001634.1 Olea europaea HOM05D000596 ORTHO05D002115 4.7e-19 98.2 122 45.1
Actinidia24898 Actinidia chinensis HOM05D000596 ORTHO05D002115 6.2e-19 97.8 127 43.3
Haze_04698 Corylus avellana HOM05D000596 ORTHO05D002115 6.2e-19 97.8 120 43.3
ECA232G1031 Erigeron canadensis HOM05D000596 ORTHO05D002115 8.0e-19 97.4 125 40.8
CSS0018744 Camellia sinensis var. sinensis HOM05D000596 ORTHO05D002115 1.8e-18 96.3 121 39.7
MD11G1284300 Malus domestica HOM05D000596 ORTHO05D002115 1.8e-18 96.3 116 40.5
Prupe.8G239900 Prunus persica HOM05D000596 ORTHO05D002115 5.2e-18 94.7 124 37.9
GSVIVG01001153001 Vitis vinifera HOM05D000596 ORTHO05D002115 6.8e-18 94.4 125 41.6
FAN24G2252 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.2e-17 93.6 120 40.0
HanXRQChr15g0466721 Helianthus annuus HOM05D000596 ORTHO05D002115 1.5e-17 93.2 119 40.3
AUR62044071 Chenopodium quinoa HOM05D000596 ORTHO05D002115 2.0e-17 92.8 135 37.0
Psat0s4437g0080 Pisum sativum HOM05D000596 ORTHO05D002115 3.4e-17 92.0 125 39.2
GSVIVG01001155001 Vitis vinifera HOM05D000596 ORTHO05D002115 3.4e-17 92.0 125 41.6
Nitab4.5_0006403g0020 Nicotiana tabacum HOM05D000596 ORTHO05D002115 4.4e-17 91.7 124 40.3
Rhsim01G0274300 Rhododendron simsii HOM05D000596 ORTHO05D002115 4.4e-17 91.7 131 39.7
ECA248G3892 Erigeron canadensis HOM05D000596 ORTHO05D002115 7.5e-17 90.9 121 37.2
TWI13G0001 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 9.8e-17 90.5 132 40.9
Migut.N02049 Erythranthe guttata HOM05D000596 ORTHO05D002115 1.3e-16 90.1 126 39.7
TWI38G0375 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 1.3e-16 90.1 126 41.3
TWI38G1945 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 1.3e-16 90.1 126 41.3
Lj1A612G7 Lonicera japonica HOM05D000596 ORTHO05D002115 2.9e-16 89.0 128 39.8
RcHm_v2.0_Chr6g0290871 Rosa chinensis HOM05D000596 ORTHO05D002115 2.9e-16 89.0 125 36.8
DCAR_019490 Daucus carota HOM05D000596 ORTHO05D002115 3.7e-16 88.6 159 34.6
Migut.N02048 Erythranthe guttata HOM05D000596 ORTHO05D002115 3.7e-16 88.6 126 38.1
TAR362G0849 Trochodendron aralioides HOM05D000596 ORTHO05D002115 3.7e-16 88.6 131 39.7
Migut.N02050 Erythranthe guttata HOM05D000596 ORTHO05D002115 4.9e-16 88.2 129 36.4
HanXRQChr17g0563931 Helianthus annuus HOM05D000596 ORTHO05D013721 4.9e-16 88.2 117 37.6
TWI74G0138 Tripterygium wilfordii HOM05D000596 ORTHO05D002115 4.9e-16 88.2 132 40.2
CAN.G1549.6 Capsicum annuum HOM05D000596 ORTHO05D002115 6.4e-16 87.8 139 35.3
HanXRQChr01g0013791 Helianthus annuus HOM05D000596 ORTHO05D002115 8.3e-16 87.4 122 40.2
MD11G1208700 Malus domestica HOM05D000596 ORTHO05D002115 1.1e-15 87.0 116 38.8
Oeu038260.1 Olea europaea HOM05D000596 ORTHO05D002115 1.1e-15 87.0 120 41.7
FvH4_3g14111 Fragaria vesca HOM05D000596 ORTHO05D002115 1.4e-15 86.7 124 41.1
FAN15G1185 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.4e-15 86.7 122 42.6
TAR365G1007 Trochodendron aralioides HOM05D000596 ORTHO05D002115 1.9e-15 86.3 127 43.3
TAR636G1765 Trochodendron aralioides HOM05D000596 ORTHO05D002115 1.9e-15 86.3 124 42.7
FAN25G2829 Fragaria x ananassa HOM05D000596 ORTHO05D002115 3.2e-15 85.5 122 41.8
Peaxi162Scf00783g00226 Petunia axillaris HOM05D000596 ORTHO05D002115 3.2e-15 85.5 132 34.8
SalBow6G6105 Salvia bowleyana HOM05D000596 ORTHO05D002115 3.2e-15 85.5 118 35.6
Oeu008757.1 Olea europaea HOM05D000596 ORTHO05D002115 4.1e-15 85.1 129 39.5
MSTRG.12561 Avicennia marina HOM05D000596 ORTHO05D002115 5.4e-15 84.7 120 39.2
vmacro16912 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 5.4e-15 84.7 118 40.7
AUR62040183 Chenopodium quinoa HOM05D000596 ORTHO05D002115 7.0e-15 84.3 135 35.6
FvH4_2g23420 Fragaria vesca HOM05D000596 ORTHO05D002115 7.0e-15 84.3 103 43.7
FAN20G2085 Fragaria x ananassa HOM05D000596 ORTHO05D002115 9.2e-15 84.0 129 40.3
vmacro14917 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 9.2e-15 84.0 107 41.1
FAN15G2104 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.2e-14 83.6 129 40.3
Hma1.2p1_1739F.1_g300010 Hydrangea macrophylla HOM05D000596 ORTHO05D002115 1.2e-14 83.6 88 43.2
FAN15G1090 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.6e-14 83.2 101 43.6
Lj1A616G6 Lonicera japonica HOM05D000596 ORTHO05D002115 1.6e-14 83.2 129 38.0
Oeu021903.1 Olea europaea HOM05D000596 ORTHO05D002115 2.7e-14 82.4 129 38.8
Cc01_g19400 Coffea canephora HOM05D000596 ORTHO05D002115 4.6e-14 81.6 133 34.6
FvH4_2g22720 Fragaria vesca HOM05D000596 ORTHO05D002115 4.6e-14 81.6 120 38.3
FAN27G1990 Fragaria x ananassa HOM05D000596 ORTHO05D002115 4.6e-14 81.6 129 39.5
MELO3C014392.2 Cucumis melo HOM05D000596 ORTHO05D002115 6.0e-14 81.3 104 43.3
FAN24G1867 Fragaria x ananassa HOM05D000596 ORTHO05D002115 6.0e-14 81.3 129 39.5
Hund20413 Selenicereus undatus HOM05D000596 ORTHO05D002115 6.0e-14 81.3 122 36.1
Rhsim13G0025800 Rhododendron simsii HOM05D000596 ORTHO05D002115 7.8e-14 80.9 118 40.7
FvH4_2g23400 Fragaria vesca HOM05D000596 ORTHO05D002115 1.0e-13 80.5 122 41.0
FAN24G1705 Fragaria x ananassa HOM05D000596 ORTHO05D002115 1.0e-13 80.5 122 41.0
Nitab4.5_0000122g0120 Nicotiana tabacum HOM05D000596 ORTHO05D002115 1.3e-13 80.1 128 37.5
Ca_08601_v3 Cicer arietinum L. HOM05D000596 ORTHO05D002115 3.9e-13 78.6 81 54.3
Ca_08603_v3 Cicer arietinum L. HOM05D000596 ORTHO05D013721 3.9e-13 78.6 81 54.3
Nn4g26282 Nelumbo nucifera HOM05D000596 ORTHO05D002115 3.9e-13 78.6 130 35.4
vmacro02579 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 3.9e-13 78.6 116 40.5
vmacro02580 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 3.9e-13 78.6 116 40.5
FvH4_2g23440 Fragaria vesca HOM05D000596 ORTHO05D002115 5.1e-13 78.2 129 38.8
Peaxi162Scf00045g00824 Petunia axillaris HOM05D000596 ORTHO05D002115 5.1e-13 78.2 125 35.2
FAN27G0621 Fragaria x ananassa HOM05D000596 ORTHO05D025538 6.6e-13 77.8 99 46.5
HanXRQChr02g0044031 Helianthus annuus HOM05D000596 ORTHO05D013721 8.6e-13 77.4 100 42.0
EL10Ac7g16724 Beta vulgaris HOM05D000596 ORTHO05D002115 1.1e-12 77.0 127 34.6
MBI04_g40952_MAGBIO Magnolia biondii HOM05D000596 ORTHO05D002115 1.5e-12 76.6 108 42.6
RcHm_v2.0_Chr6g0290941 Rosa chinensis HOM05D000596 ORTHO05D002115 1.5e-12 76.6 122 36.9
PGSC0003DMG400020053 Solanum tuberosum HOM05D000596 ORTHO05D002115 1.9e-12 76.3 136 33.1
Sopen06g035610 Solanum pennellii HOM05D000596 ORTHO05D002115 9.5e-12 73.9 127 33.1
Solyc06g084240.2 Solanum lycopersicum HOM05D000596 ORTHO05D002115 1.2e-11 73.6 127 33.1
Cc08_g07530 Coffea canephora HOM05D000596 ORTHO05D002115 1.6e-11 73.2 118 34.7
Nitab4.5_0010312g0010 Nicotiana tabacum HOM05D000596 ORTHO05D002115 2.1e-11 72.8 128 32.8
Aqoxy5G00487 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 2.8e-11 72.4 79 43.0
Nitab4.5_0001011g0010 Nicotiana tabacum HOM05D000596 ORTHO05D002115 2.8e-11 72.4 111 38.7
Aqoxy7G01313 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 3.6e-11 72.0 121 37.2
FAN27G1300 Fragaria x ananassa HOM05D000596 ORTHO05D002115 3.6e-11 72.0 97 42.3
PGR119G1085 Punica granatum HOM05D000596 ORTHO05D002115 4.7e-11 71.6 80 42.5
PGSC0003DMG400001948 Solanum tuberosum HOM05D000596 ORTHO05D002115 6.2e-11 71.2 121 33.9
Ah.08g211190 Amaranthus hybridus HOM05D000596 ORTHO05D002115 8.1e-11 70.9 129 32.6
Aqoxy1G03940 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 8.1e-11 70.9 120 37.5
PGSC0003DMG400012879 Solanum tuberosum HOM05D000596 ORTHO05D013721 1.1e-10 70.5 115 34.8
Aqoxy7G01108 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 2.3e-10 69.3 121 35.5
Aqoxy6G01820 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 3.1e-10 68.9 129 35.7
vmacro02578 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 4.0e-10 68.6 162 27.8
Nitab4.5_0008567g0030 Nicotiana tabacum HOM05D000596 ORTHO05D002115 1.2e-09 67.0 113 37.2
Solyc08g005710.3 Solanum lycopersicum HOM05D000596 ORTHO05D002115 1.2e-09 67.0 125 35.2
CAN.G1078.5 Capsicum annuum HOM05D000596 ORTHO05D002115 2.0e-09 66.2 126 38.1
Actinidia21117 Actinidia chinensis HOM05D000596 ORTHO05D002115 2.6e-09 65.9 63 44.4
Peaxi162Scf00045g00916 Petunia axillaris HOM05D000596 ORTHO05D002115 2.6e-09 65.9 112 33.0
arahy.Tifrunner.gnm1.ann1.RMA2DS Arachis hypogaea HOM05D000596 ORTHO05D013721 5.8e-09 64.7 72 47.2
Nitab4.5_0002069g0030 Nicotiana tabacum HOM05D000596 ORTHO05D002115 5.8e-09 64.7 129 34.9
Sc24g0002780 Simmondsia chinensis HOM05D000596 ORTHO05D002115 7.5e-09 64.3 125 29.6
CAN.G514.9 Capsicum annuum HOM05D000596 ORTHO05D002115 9.9e-09 63.9 116 32.8
SGA_v2.0_scaffold1G00487 Striga asiatica HOM05D000596 ORTHO05D002115 1.3e-08 63.5 133 34.6
Aqoxy1G03725 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 1.7e-08 63.2 104 36.5
Cc00_g16820 Coffea canephora HOM05D000596 ORTHO05D013721 2.2e-08 62.8 84 42.9
Aqoxy4G03258 Aquilegia oxysepala HOM05D000596 ORTHO05D013721 6.4e-08 61.2 119 36.1
Cc08_g07480 Coffea canephora HOM05D000596 ORTHO05D002115 1.1e-07 60.5 118 36.4
Medtr8g073530 Medicago truncatula HOM05D000596 ORTHO05D002115 1.1e-07 60.5 66 45.5
Oeu008755.1 Olea europaea HOM05D000596 ORTHO05D002115 1.1e-07 60.5 125 34.4
Peaxi162Scf00014g00234 Petunia axillaris HOM05D000596 ORTHO05D002115 1.1e-07 60.5 123 34.1
Cc00_g17280 Coffea canephora HOM05D000596 ORTHO05D002115 2.4e-07 59.3 117 35.0
ATR0332G028 Amborella trichopoda HOM05D000596 ORTHO05D002115 3.2e-07 58.9 83 37.3
SalBow4G3258 Salvia bowleyana HOM05D000596 ORTHO05D002115 5.4e-07 58.2 104 34.6
Aqoxy7G01387 Aquilegia oxysepala HOM05D000596 ORTHO05D002115 1.6e-06 56.6 123 30.9
SalBow4G2538 Salvia bowleyana HOM05D000596 ORTHO05D002115 3.5e-06 55.5 114 35.1
vmacro14647 Vaccinium macrocarpon HOM05D000596 ORTHO05D002115 4.6e-06 55.1 51 43.1


User provided reference genes

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