Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 3.9e-196 688.0 351 100.0
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 2.8e-162 575.5 360 82.8
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 1.4e-156 556.6 353 81.9
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 6.3e-154 547.7 359 80.5
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 4.2e-150 535.0 351 79.2
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 2.0e-147 526.2 439 67.4
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 1.6e-144 516.5 480 61.0
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 2.0e-144 516.2 443 66.1
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 2.3e-143 512.7 323 82.7
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 1.1e-142 510.4 359 77.7
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 2.0e-139 499.6 418 65.8
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 2.0e-139 499.6 352 74.7
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 3.3e-118 429.1 350 64.6
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 4.3e-118 428.7 351 64.4
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.7e-114 416.8 492 52.0
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 3.2e-113 412.5 351 63.8
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 5.4e-113 411.8 351 62.4
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.0e-111 407.5 348 62.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 1.0e-111 407.5 324 66.7
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 8.6e-111 404.4 350 61.4
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 2.5e-110 402.9 352 60.8
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 3.3e-110 402.5 347 60.8
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.2e-109 400.6 452 53.1
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 4.0e-108 395.6 357 60.5
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 5.2e-108 395.2 397 56.9
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 8.9e-108 394.4 342 63.2
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 9.9e-107 391.0 473 49.7
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 1.7e-106 390.2 330 64.2
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.7e-106 390.2 353 60.3
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.9e-105 386.7 454 51.8
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.6e-104 383.6 351 60.7
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 4.6e-104 382.1 353 59.2
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 3.9e-103 379.0 393 55.0
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.5e-102 377.1 468 50.0
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.9e-102 376.7 375 55.7
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 3.3e-102 375.9 391 54.2
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 7.3e-102 374.8 336 60.7
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.3e-101 374.0 323 61.9
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.8e-101 372.9 347 58.8
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 3.6e-101 372.5 483 48.2
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.1e-100 370.9 489 46.8
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 1.2e-99 367.5 380 54.5
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 2.0e-99 366.7 345 58.0
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 5.8e-99 365.2 308 65.6
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 1.3e-98 364.0 355 57.7
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 4.9e-98 362.1 459 49.2
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.1e-97 360.9 438 50.2
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 1.2e-96 357.5 499 45.1
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 2.1e-96 356.7 352 55.7
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 4.6e-96 355.5 446 48.9
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 7.8e-96 354.8 374 55.1
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 3.0e-95 352.8 500 44.4
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 3.9e-95 352.4 491 44.8
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 6.6e-95 351.7 483 44.9
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.7e-95 351.3 491 44.8
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 8.7e-95 351.3 525 44.0
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 8.7e-95 351.3 360 55.6
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.1e-94 350.9 458 47.6
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.9e-94 350.1 528 42.6
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.9e-94 350.1 458 47.6
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.5e-94 349.7 501 43.9
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.6e-93 347.1 449 47.7
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.8e-93 346.3 492 44.1
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 4.8e-93 345.5 500 43.0
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 1.8e-92 343.6 440 47.5
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 3.1e-92 342.8 438 48.9
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.2e-91 340.9 405 49.6
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.2e-91 340.9 511 42.3
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.5e-91 340.5 415 48.9
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 4.5e-91 339.0 432 48.4
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 9.9e-91 337.8 347 55.0
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 2.2e-90 336.7 471 45.9
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 1.1e-89 334.3 279 62.4
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.3e-87 326.6 425 47.8
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.5e-86 323.9 335 56.1
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.9e-86 323.6 383 50.1
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.9e-86 323.6 383 50.1
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 3.3e-86 322.8 356 51.1
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.1e-84 317.8 484 43.6
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.8e-84 317.0 410 47.8
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.8e-84 317.0 423 46.6
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 1.8e-84 317.0 281 61.2
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 5.3e-84 315.5 496 43.8
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 6.9e-84 315.1 407 46.9
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 1.2e-83 314.3 456 43.9
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 2.0e-83 313.5 438 43.2
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.0e-83 313.5 409 47.9
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.4e-83 312.8 478 42.7
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.7e-82 310.5 284 59.2
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 6.5e-82 308.5 430 45.8
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 4.2e-81 305.8 443 44.7
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 5.5e-81 305.4 308 55.5
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 2.7e-80 303.1 361 51.2
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 3.5e-80 302.8 409 46.0
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 2.1e-77 293.5 430 43.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-76 290.4 327 51.4
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.8e-76 290.4 413 45.5
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 2.6e-75 286.6 455 42.4
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.3e-74 284.3 441 44.0
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 1.7e-74 283.9 458 41.9
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.9e-73 280.4 453 41.5
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.6e-72 277.3 454 41.4
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.7e-72 276.6 453 42.6
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 6.1e-72 275.4 420 42.9
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.3e-71 274.2 383 44.1
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 8.7e-71 271.6 350 48.6
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 6.3e-69 265.4 493 36.1
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 2.4e-68 263.5 583 35.0
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.1e-68 263.1 498 36.9
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.1e-68 263.1 498 36.9
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 5.3e-68 262.3 456 39.9
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 1.2e-67 261.2 372 45.4
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 3.2e-65 253.1 315 48.9
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.6e-64 250.8 588 34.0
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.0e-63 246.5 487 38.2
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 2.2e-61 240.4 363 43.8
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 2.9e-58 229.9 378 41.8
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 3.6e-56 223.0 319 44.5
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 4.4e-54 216.1 142 74.6
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.1e-52 209.9 149 71.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 4.5e-51 206.1 367 40.9
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.7e-48 196.8 317 43.5
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.1e-46 191.4 146 69.2
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 4.4e-46 189.5 210 53.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 1.0e-39 168.3 449 32.7
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 7.2e-33 145.6 113 65.5
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 2.4e-28 130.6 118 59.3
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 2.5e-25 120.6 348 29.9
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.8e-23 114.4 74 73.0
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 5.2e-23 112.8 76 69.7
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 7.3e-17 92.4 100 51.0
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 3.4e-14 83.6 86 48.8
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 1.3e-13 81.6 86 44.2


User provided reference genes

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