Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06605_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 3.9e-177 624.8 336 100.0
Ca_06861_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.1e-175 619.0 336 99.4
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.1e-128 463.8 290 85.9
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 2.3e-60 236.9 297 58.2
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 7.6e-48 195.3 291 49.1
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 3.9e-44 183.0 292 49.0
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 3.3e-43 179.9 293 48.5
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 1.4e-41 174.5 291 46.7
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 2.2e-39 167.2 281 46.3
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 5.5e-38 162.5 292 44.9
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 2.3e-36 157.1 289 42.9
Medtr8g079870 Medicago truncatula HOM05D006144 ORTHO05D006357 3.9e-36 156.4 96 81.2
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.9e-30 137.5 280 41.4
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 1.6e-29 134.4 264 43.6
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.4e-28 131.3 287 39.4
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 3.0e-28 130.2 295 43.1
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 5.1e-28 129.4 301 38.9
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 7.4e-27 125.6 273 41.0
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.7e-26 124.4 330 37.3
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.2e-26 124.0 274 40.9
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.8e-26 123.6 273 39.9
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 3.7e-26 123.2 300 41.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 4.8e-26 122.9 303 38.9
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.4e-25 120.6 274 39.1
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 4.1e-25 119.8 321 36.8
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 6.9e-25 119.0 274 43.1
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 9.1e-25 118.6 296 41.6
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.6e-24 117.1 307 37.8
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.7e-23 114.4 264 38.6
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 1.1e-22 111.7 276 39.9
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.1e-22 111.7 277 39.4
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.9e-22 110.9 300 35.3
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.9e-22 110.9 309 36.2
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 9.4e-22 108.6 293 36.2
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 4.7e-21 106.3 300 35.0
Ca_04844_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000002 6.1e-21 105.9 55 94.5
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 6.1e-21 105.9 289 38.8
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 7.9e-21 105.5 275 34.9
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.4e-20 104.8 275 34.9
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.0e-20 103.6 55 92.7
Ca_27196_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 3.0e-20 103.6 55 92.7
Ca_04058_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 5.1e-20 102.8 55 92.7
Ca_19543_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 5.1e-20 102.8 55 92.7
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 8.8e-20 102.1 53 94.3
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 3.3e-19 100.1 310 36.5
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 3.3e-19 100.1 291 35.1
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 4.4e-19 99.8 316 32.9
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.7e-19 99.4 310 36.1
Ca_12020_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 7.4e-19 99.0 50 96.0
Ca_19865_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 7.4e-19 99.0 52 94.2
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 2.8e-18 97.1 295 34.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 2.8e-18 97.1 273 35.2
Ca_27655_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 3.7e-18 96.7 55 87.3
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 4.8e-18 96.3 287 35.9
Ca_28022_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 8.2e-18 95.5 55 87.3
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 8.2e-18 95.5 305 32.8
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 1.4e-17 94.7 287 34.8
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 1.8e-17 94.4 290 35.5
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.8e-17 94.4 293 36.9
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 3.1e-17 93.6 263 35.4
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 5.3e-17 92.8 282 35.1
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 2.0e-16 90.9 310 35.2
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 3.5e-16 90.1 299 33.8
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 3.5e-16 90.1 310 35.2
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 5.0e-15 86.3 314 33.1
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 6.5e-15 85.9 289 33.9
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.5e-14 84.0 289 32.9
Ca_02596_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.2e-14 83.6 54 75.9
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 4.2e-14 83.2 51 74.5
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 2.7e-13 80.5 312 35.6
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 6.1e-13 79.3 275 34.2
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 1.4e-12 78.2 276 33.0
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.0e-12 77.0 274 33.6
Ca_06604_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 5.2e-12 76.3 36 100.0
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 1.1e-11 75.1 312 33.0
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.1e-11 75.1 152 38.2
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 1.7e-10 71.2 242 33.9
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 2.2e-10 70.9 289 27.0
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 3.7e-10 70.1 269 32.7
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 6.3e-10 69.3 276 33.3
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 6.3e-10 69.3 299 36.5
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 1.4e-09 68.2 261 29.1
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.8e-09 67.8 258 34.5
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 4.1e-09 66.6 156 30.1
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 5.3e-09 66.2 108 39.8
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.6e-08 64.7 313 32.9
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 2.0e-08 64.3 317 35.0
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 2.0e-08 64.3 238 30.3
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.5e-08 63.2 273 31.5
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 5.9e-08 62.8 80 45.0
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.3e-07 61.6 248 31.5
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 6.5e-07 59.3 312 31.7
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 6.5e-07 59.3 296 33.1
Sp2g29830 Schrenkiella parvula HOM05D012861 ORTHO05D006357 8.5e-07 58.9 99 42.4
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 1.1e-06 58.5 262 32.8
Thhalv10004001m.g Eutrema salsugineum HOM05D012861 ORTHO05D006357 1.9e-06 57.8 101 40.6
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 2.5e-06 57.4 271 28.8
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 2.5e-06 57.4 301 28.6
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 2.5e-06 57.4 296 30.7
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 5.5e-06 56.2 235 33.6
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 7.2e-06 55.8 260 29.2


User provided reference genes

Program Settings