Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06565_v3 Cicer arietinum L. HOM05D006554 ORTHO05D008778 2.3e-102 375.6 191 100.0
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 1.4e-70 270.0 171 80.7
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 3.4e-69 265.4 173 79.2
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 6.0e-66 254.6 173 78.6
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 8.4e-52 207.6 174 64.4
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 7.1e-51 204.5 174 64.4
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 4.5e-45 185.3 166 60.2
VMungo1383G3169 Vigna mungo HOM05D006554 ORTHO05D008778 1.9e-43 179.9 164 59.8
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 6.7e-41 171.4 148 58.8
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 4.3e-40 168.7 175 58.9
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 1.8e-38 163.3 181 54.1
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 3.8e-28 129.0 158 46.8
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 5.0e-28 128.6 189 40.7
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 1.9e-27 126.7 158 44.3
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 7.2e-27 124.8 194 39.2
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 9.4e-27 124.4 158 43.0
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 4.7e-26 122.1 177 41.2
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.4e-25 120.6 202 41.1
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 1.4e-25 120.6 149 44.3
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 6.7e-25 118.2 175 42.3
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 1.1e-24 117.5 151 43.7
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 2.0e-24 116.7 182 41.8
Atru.chr6.2450 Acer truncatum HOM05D006554 ORTHO05D008778 9.7e-24 114.4 159 42.8
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-23 113.6 155 41.3
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 2.2e-23 113.2 191 40.3
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 3.7e-23 112.5 182 40.1
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 1.1e-22 110.9 199 40.7
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.8e-22 110.2 155 41.9
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 2.4e-22 109.8 176 39.8
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 4.1e-22 109.0 155 41.3
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.6e-21 106.3 125 44.0
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 4.5e-21 105.5 162 41.4
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 7.7e-21 104.8 125 43.2
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 1.0e-20 104.4 157 42.7
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 3.8e-20 102.4 165 38.2
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 8.5e-20 101.3 158 41.1
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 8.5e-20 101.3 157 43.3
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 1.5e-19 100.5 192 38.0
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 1.9e-19 100.1 191 39.3
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 2.5e-19 99.8 155 41.9
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 4.2e-19 99.0 166 38.0
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 5.5e-19 98.6 106 46.2
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 5.5e-19 98.6 106 46.2
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 1.2e-18 97.4 153 41.2
Lj7A603G61 Lonicera japonica HOM05D006554 ORTHO05D008778 2.1e-18 96.7 169 38.5
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 3.6e-18 95.9 166 37.3
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 3.6e-18 95.9 175 37.7
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 6.1e-18 95.1 141 41.1
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 1.0e-17 94.4 122 43.4
COL.COLO4_29198 Corchorus olitorius HOM05D006554 ORTHO05D008778 6.7e-17 91.7 155 38.7
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 1.5e-16 90.5 156 41.7
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 4.4e-16 89.0 173 39.3
Sc03g0007220 Simmondsia chinensis HOM05D006554 ORTHO05D008778 4.4e-16 89.0 188 34.6
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 7.5e-16 88.2 161 41.0
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 7.5e-16 88.2 161 41.0
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 9.7e-16 87.8 185 34.6
DCAR_002966 Daucus carota HOM05D006554 ORTHO05D008778 2.8e-15 86.3 164 34.8
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.7e-15 85.9 182 36.8
CDE09G1186 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 1.4e-14 84.0 140 33.6
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 2.4e-14 83.2 140 38.6
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 5.3e-14 82.0 122 44.3
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 9.1e-14 81.3 154 37.7
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 3.5e-13 79.3 185 33.0
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 3.5e-13 79.3 154 37.7
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 2.2e-12 76.6 153 38.6
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 2.2e-12 76.6 152 37.5
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 1.1e-11 74.3 173 32.4
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 1.1e-11 74.3 147 33.3
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 3.2e-11 72.8 129 31.0
Gohir.D10G116100 Gossypium hirsutum HOM05D006554 ORTHO05D008778 1.2e-10 70.9 108 41.7
Gorai.011G128000 Gossypium raimondii HOM05D006554 ORTHO05D008778 2.1e-10 70.1 108 41.7
Cpa.g.sc130.62 Carica papaya HOM05D006554 ORTHO05D008778 2.7e-10 69.7 103 40.8
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 6.1e-10 68.6 167 31.7
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 4.0e-09 65.9 143 32.2
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 6.8e-09 65.1 135 32.6
Gorai.001G185000 Gossypium raimondii HOM05D004314 ORTHO05D018179 1.2e-08 64.3 93 41.9
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 1.2e-08 64.3 195 29.7
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 2.0e-08 63.5 124 29.8
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 3.4e-08 62.8 136 35.3
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 1.3e-07 60.8 86 46.5
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 3.1e-06 56.2 145 31.0


User provided reference genes

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