Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 5.8e-43 177.2 90 100.0
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 6.0e-40 167.2 90 93.3
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.0e-39 166.4 90 93.3
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 6.6e-39 163.7 90 91.1
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.1e-38 162.9 90 91.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 4.3e-38 161.0 88 89.8
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 8.0e-37 156.8 90 84.4
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.1e-36 156.4 88 86.4
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.2e-35 152.9 86 83.7
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.6e-35 151.8 86 84.9
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 7.5e-35 150.2 87 80.5
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 2.9e-34 148.3 90 76.7
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 75.6
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 6.4e-34 147.1 86 80.2
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 6.4e-34 147.1 86 77.9
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 6.4e-34 147.1 90 76.7
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 8.3e-34 146.7 90 75.6
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 74.4
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.1e-33 146.4 86 77.9
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.1e-33 146.4 86 77.9
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 74.4
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 90 75.6
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 1.4e-33 146.0 90 75.6
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 74.4
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 73.3
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.2e-33 144.8 84 84.5
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 4.1e-33 144.4 86 74.4
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 75.6
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 86 77.9
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 74.4
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 74.4
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 71.1
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 71.1
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 74.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 68.9
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 74.4
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 73.3
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 73.3
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.6e-32 142.5 86 76.7
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 74.4
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 2.7e-32 141.7 88 73.9
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 72.2
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 73.3
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 4.6e-32 141.0 90 72.2
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 6.0e-32 140.6 86 79.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 71.1
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 71.1
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 71.1
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 7.8e-32 140.2 86 72.1
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.0e-31 139.8 89 73.0
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 71.1
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.0e-31 139.8 86 75.6
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 68.9
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 86 75.6
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 70.0
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.7e-31 139.0 88 75.0
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 71.1
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 73.3
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 70.0
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 71.1
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 71.1
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 75.6
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 5.1e-31 137.5 84 73.8
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 70.0
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 70.0
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.1e-30 136.3 99 66.7
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.1e-30 136.3 87 71.3
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 67.8
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 68.9
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 72.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 67.8
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 72.1
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 68.9
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.2e-29 132.9 90 64.4
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.6e-29 132.5 70 95.7
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 72.7
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 65.6
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 66.7
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.8e-29 131.7 86 72.1
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 3.6e-29 131.3 91 70.3
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 3.6e-29 131.3 91 70.3
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 63.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.2e-29 130.6 86 67.4
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 6.2e-29 130.6 88 67.0
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 8.1e-29 130.2 90 64.4
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.1e-28 129.8 91 70.3
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.8e-28 129.0 97 64.9
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 5.2e-28 127.5 90 65.6
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 6.8e-28 127.1 90 61.1
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 6.8e-28 127.1 88 65.9
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 6.8e-28 127.1 120 55.0
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 1.5e-27 125.9 72 81.9
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.0e-27 125.6 70 87.1
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 2.0e-27 125.6 94 67.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.0e-27 125.6 90 61.1
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.0e-27 125.6 86 67.4
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.6e-27 125.2 70 85.7
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 5.8e-27 124.0 84 69.0
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 5.8e-27 124.0 97 63.9
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 7.5e-27 123.6 88 68.2
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 6.4e-26 120.6 90 63.3
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 9.2e-25 116.7 69 78.3
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 9.2e-25 116.7 66 86.4
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.0e-23 113.2 70 72.9
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.5e-22 109.4 72 72.2
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 3.3e-22 108.2 63 77.8
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 4.7e-21 104.4 68 72.1
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 4.7e-21 104.4 69 66.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 8.1e-21 103.6 71 69.0
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.8e-20 102.4 57 82.5
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 2.4e-20 102.1 68 66.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 2.6e-19 98.6 90 55.6
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 4.4e-19 97.8 59 74.6
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 3.8e-18 94.7 77 63.6
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 6.4e-18 94.0 71 67.6
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.9e-14 82.4 62 67.7
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 3.6e-13 78.2 53 73.6
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.8e-12 75.9 93 43.0
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 3.1e-12 75.1 90 48.9
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 8.7e-07 57.0 47 53.2
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 1.9e-06 55.8 41 70.7
arahy.Tifrunner.gnm1.ann1.3U8U6D Arachis hypogaea HOM05D054567 ORTHO05D007600 7.3e-06 53.9 33 75.8


User provided reference genes

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