Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.1e-31 139.4 73 100.0
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 2.5e-28 128.3 71 90.1
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.0e-26 122.9 71 85.9
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.8e-26 122.1 67 91.0
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 2.3e-26 121.7 69 88.4
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 2.0e-25 118.6 66 87.9
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.4e-25 117.9 72 84.7
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 4.4e-25 117.5 69 85.5
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 7.5e-25 116.7 63 90.5
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 7.5e-25 116.7 66 86.4
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 7.5e-25 116.7 66 89.4
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 9.8e-25 116.3 71 83.1
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 9.8e-25 116.3 62 90.3
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 9.8e-25 116.3 70 87.1
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.3e-24 115.9 69 84.1
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.3e-24 115.9 69 84.1
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.3e-24 115.9 69 84.1
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.3e-24 115.9 69 84.1
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.7e-24 115.5 66 87.9
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 2.2e-24 115.2 69 84.1
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 2.2e-24 115.2 76 80.3
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.2e-24 115.2 71 80.3
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 2.8e-24 114.8 68 82.4
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.8e-24 114.8 62 90.3
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 6.3e-24 113.6 66 84.8
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 6.3e-24 113.6 66 84.8
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 6.3e-24 113.6 67 85.1
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 6.3e-24 113.6 58 93.1
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 6.3e-24 113.6 65 86.2
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 8.3e-24 113.2 70 81.4
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 8.3e-24 113.2 58 93.1
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-23 112.8 63 85.7
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.1e-23 112.8 72 80.6
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.4e-23 112.5 67 83.6
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 1.8e-23 112.1 65 83.1
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.8e-23 112.1 67 82.1
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.8e-23 112.1 57 93.0
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 2.4e-23 111.7 61 88.5
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.4e-23 111.7 68 80.9
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 3.1e-23 111.3 70 80.0
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 4.1e-23 110.9 76 81.6
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 4.1e-23 110.9 70 80.0
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 4.1e-23 110.9 70 80.0
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 4.1e-23 110.9 64 87.5
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 4.1e-23 110.9 66 84.8
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 5.4e-23 110.5 67 83.6
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 1.2e-22 109.4 61 88.5
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.6e-22 109.0 68 80.9
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 2.0e-22 108.6 72 80.6
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 2.0e-22 108.6 64 82.8
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.5e-22 107.8 68 79.4
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 4.5e-22 107.5 62 85.5
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 5.9e-22 107.1 70 80.0
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 5.9e-22 107.1 55 89.1
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 5.9e-22 107.1 70 78.6
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 7.7e-22 106.7 58 86.2
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 1.0e-21 106.3 55 90.9
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.3e-21 105.9 68 82.4
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.3e-21 105.9 57 87.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.7e-21 105.5 61 88.5
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.3e-21 105.1 70 78.6
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 2.9e-21 104.8 57 89.5
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 5.0e-21 104.0 67 79.1
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 8.6e-21 103.2 69 78.3
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 1.1e-20 102.8 52 92.3
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 1.1e-20 102.8 60 83.3
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 1.1e-20 102.8 63 81.0
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.5e-20 102.4 74 73.0
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 1.5e-20 102.4 72 75.0
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.9e-20 102.1 70 75.7
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.9e-20 102.1 96 60.4
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 2.5e-20 101.7 61 82.0
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 2.5e-20 101.7 60 83.3
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 3.3e-20 101.3 72 73.6
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 3.3e-20 101.3 66 77.3
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 3.3e-20 101.3 66 77.3
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 3.3e-20 101.3 66 77.3
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 3.3e-20 101.3 66 77.3
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 5.5e-20 100.5 72 73.6
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 9.5e-20 99.8 70 77.1
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 9.5e-20 99.8 70 71.4
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 9.5e-20 99.8 70 71.4
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 9.5e-20 99.8 70 71.4
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 1.2e-19 99.4 68 73.5
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.2e-19 99.4 72 72.2
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 1.6e-19 99.0 54 90.7
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 2.3e-18 95.1 71 70.4
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 3.0e-18 94.7 50 90.0
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 5.2e-18 94.0 44 100.0
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 6.8e-18 93.6 62 71.0
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 1.2e-17 92.8 66 74.2
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.2e-17 92.8 62 71.0
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 1.5e-17 92.4 68 69.1
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 2.0e-17 92.0 65 72.3
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.6e-17 91.7 44 97.7
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 3.4e-17 91.3 64 65.6
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 4.4e-17 90.9 69 69.6
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 7.5e-17 90.1 62 79.0
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 7.5e-17 90.1 62 79.0
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 9.8e-17 89.7 99 52.5
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 2.2e-16 88.6 44 93.2
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.2e-16 88.6 42 97.6
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 3.7e-16 87.8 44 90.9
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 6.3e-16 87.0 45 88.9
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.1e-15 86.3 61 72.1
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 1.3e-13 79.3 52 78.8
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.9e-13 77.8 47 78.7
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.1e-12 76.3 37 97.3
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-12 76.3 47 76.6
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.2e-10 67.4 46 67.4
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 6.8e-10 67.0 30 96.7
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.8e-09 63.9 34 85.3
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 5.8e-09 63.9 34 85.3
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 7.5e-09 63.5 64 60.9
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 1.6e-06 55.8 56 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 2.0e-06 55.5 55 52.7


User provided reference genes

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