Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06483_v3 Cicer arietinum L. HOM05D005849 ORTHO05D004704 7.8e-95 350.5 185 100.0
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 2.1e-31 139.8 191 53.9
LjContig00081g0015024 Lotus japonicus HOM05D005849 ORTHO05D004704 7.0e-27 124.8 214 47.2
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 1.2e-26 124.0 212 46.2
Psat2g002880 Pisum sativum HOM05D005849 ORTHO05D004704 5.9e-26 121.7 187 49.2
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 5.0e-25 118.6 203 45.8
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 1.0e-22 110.9 199 43.2
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 6.7e-22 108.2 209 40.7
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 8.8e-22 107.8 200 46.5
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 5.7e-21 105.1 207 42.0
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 7.5e-21 104.8 207 42.5
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 1.7e-20 103.6 205 41.0
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 8.2e-20 101.3 197 45.2
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 1.8e-19 100.1 222 38.3
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 4.1e-19 99.0 199 41.2
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 4.1e-19 99.0 203 39.4
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 9.1e-19 97.8 207 42.0
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 9.1e-19 97.8 161 47.2
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 2.7e-18 96.3 187 42.8
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 7.7e-18 94.7 129 49.6
Sed0027972 Sechium edule HOM05D005849 ORTHO05D004704 7.7e-18 94.7 142 48.6
CsaV3_6G009640 Cucumis sativus L. HOM05D005849 ORTHO05D004704 1.0e-17 94.4 129 49.6
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 1.0e-17 94.4 201 39.3
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 3.8e-17 92.4 154 46.1
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 3.8e-17 92.4 122 51.6
MELO3C025957.2 Cucumis melo HOM05D005849 ORTHO05D004704 6.5e-17 91.7 131 46.6
AUR62015005 Chenopodium quinoa HOM05D005849 ORTHO05D004704 8.5e-17 91.3 171 43.9
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 8.5e-17 91.3 132 47.0
RcHm_v2.0_Chr2g0155981 Rosa chinensis HOM05D005849 ORTHO05D004704 8.5e-17 91.3 204 40.7
Sed0012118 Sechium edule HOM05D005849 ORTHO05D004704 8.5e-17 91.3 133 48.9
AUR62029117 Chenopodium quinoa HOM05D005849 ORTHO05D004704 4.2e-16 89.0 171 43.3
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 7.2e-16 88.2 201 38.3
EL10Ac9g22679 Beta vulgaris HOM05D005849 ORTHO05D004704 9.4e-16 87.8 168 45.8
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 1.6e-15 87.0 141 45.4
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.1e-15 86.7 206 37.9
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.6e-15 85.9 201 37.8
Ah.01g002540 Amaranthus hybridus HOM05D005849 ORTHO05D004704 6.1e-15 85.1 119 48.7
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 6.1e-15 85.1 185 40.5
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 1.0e-14 84.3 168 39.9
TWI18G0644 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 1.0e-14 84.3 167 40.1
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.0e-14 84.3 113 50.4
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.8e-14 83.6 204 39.2
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 1.8e-14 83.6 141 44.7
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 2.3e-14 83.2 168 39.9
CiPaw.04G197000 Carya illinoinensis HOM05D005849 ORTHO05D004704 3.0e-14 82.8 195 41.5
DCAR_019680 Daucus carota HOM05D005849 ORTHO05D004704 4.0e-14 82.4 161 39.8
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 4.0e-14 82.4 127 46.5
Lalb_Chr10g0107651 Lupinus albus HOM05D005849 ORTHO05D004704 5.2e-14 82.0 196 41.3
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 6.8e-14 81.6 213 32.4
VMungo0540G2501 Vigna mungo HOM05D005849 ORTHO05D004704 1.2e-13 80.9 84 57.1
Sc20g0004000 Simmondsia chinensis HOM05D005849 ORTHO05D004704 2.0e-13 80.1 112 50.0
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 2.6e-13 79.7 211 35.1
FvH4_6g40610 Fragaria vesca HOM05D005849 ORTHO05D004704 2.6e-13 79.7 202 38.1
FAN14G3262 Fragaria x ananassa HOM05D005849 ORTHO05D004704 2.6e-13 79.7 202 38.1
FAN05G2424 Fragaria x ananassa HOM05D005849 ORTHO05D004704 3.4e-13 79.3 205 37.6
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 3.4e-13 79.3 169 39.1
DCAR_012893 Daucus carota HOM05D005849 ORTHO05D004704 4.4e-13 79.0 127 44.9
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 5.7e-13 78.6 200 37.5
Actinidia07866 Actinidia chinensis HOM05D005849 ORTHO05D004704 9.8e-13 77.8 153 42.5
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 9.8e-13 77.8 201 37.3
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 1.3e-12 77.4 226 35.0
FAN02G2959 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.7e-12 77.0 202 38.1
Ciclev10018021m.g Citrus clementina HOM05D005849 ORTHO05D004704 2.2e-12 76.6 141 46.8
FAN09G2506 Fragaria x ananassa HOM05D005849 ORTHO05D004704 2.2e-12 76.6 202 37.6
Lsat_1_v5_gn_9_103781 Lactuca sativa HOM05D005849 ORTHO05D004704 2.2e-12 76.6 149 43.6
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 2.8e-12 76.3 227 33.9
Solyc07g045450.1 Solanum lycopersicum HOM05D005849 ORTHO05D004704 4.8e-12 75.5 130 43.8
Sopen07g023990 Solanum pennellii HOM05D005849 ORTHO05D004704 4.8e-12 75.5 130 43.8
ClCG02G009210 Citrullus lanatus HOM05D005849 ORTHO05D004704 6.3e-12 75.1 125 43.2
Medtr3g082780 Medicago truncatula HOM05D005849 ORTHO05D004704 6.3e-12 75.1 116 43.1
ECA240G3450 Erigeron canadensis HOM05D005849 ORTHO05D004704 8.3e-12 74.7 120 48.3
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 1.1e-11 74.3 206 36.9
Sp3g23270 Schrenkiella parvula HOM05D009495 ORTHO05D004704 1.1e-11 74.3 81 54.3
AL3G42130 Arabidopsis lyrata HOM05D009495 ORTHO05D004704 1.4e-11 73.9 81 54.3
Glyma.20G062100 Glycine max HOM05D005849 ORTHO05D004704 1.4e-11 73.9 222 32.4
AT2G04480 Arabidopsis thaliana HOM05D009495 ORTHO05D004704 1.8e-11 73.6 81 53.1
arahy.Tifrunner.gnm1.ann1.8Y07GA Arachis hypogaea HOM05D005849 ORTHO05D004704 7.0e-11 71.6 121 47.9
Sp7g06260 Schrenkiella parvula HOM05D009495 ORTHO05D004704 9.1e-11 71.2 79 55.7
arahy.Tifrunner.gnm1.ann1.S46AGL Arachis hypogaea HOM05D005849 ORTHO05D004704 1.6e-10 70.5 122 46.7
BcaC06g35871 Brassica carinata HOM05D009495 ORTHO05D004704 1.6e-10 70.5 80 51.2
C07p10220 Brassica napus HOM05D009495 ORTHO05D004704 1.6e-10 70.5 80 51.2
BolC7t41473H Brassica oleracea HOM05D009495 ORTHO05D004704 1.6e-10 70.5 80 51.2
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 1.6e-10 70.5 202 31.7
BraA07t28463Z Brassica rapa HOM05D009495 ORTHO05D004704 2.0e-10 70.1 80 50.0
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.7e-10 69.7 155 36.8
Thhalv10002998m.g Eutrema salsugineum HOM05D009495 ORTHO05D004704 3.5e-10 69.3 77 54.5
CARHR102390 Cardamine hirsuta HOM05D009495 ORTHO05D004704 4.5e-10 68.9 81 50.6
A07p06700 Brassica napus HOM05D009495 ORTHO05D004704 5.9e-10 68.6 80 50.0
BcaB06g26787 Brassica carinata HOM05D009495 ORTHO05D004704 7.7e-10 68.2 78 50.0
Lj1P796T11 Lonicera japonica HOM05D005849 ORTHO05D004704 7.7e-10 68.2 111 51.4
THA.LOC104808845 Tarenaya hassleriana HOM05D005849 ORTHO05D004704 2.3e-09 66.6 96 46.9
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 2.9e-09 66.2 124 41.9
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 5.0e-09 65.5 217 32.7
Oeu064351.1 Olea europaea HOM05D005849 ORTHO05D004704 5.0e-09 65.5 130 43.1
A04p10030 Brassica napus HOM05D009495 ORTHO05D004704 1.1e-08 64.3 77 53.2
BraA04t16665Z Brassica rapa HOM05D009495 ORTHO05D004704 1.1e-08 64.3 77 53.2
Phvul.007G121090 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 1.1e-08 64.3 191 35.1
Nn1g04368 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.5e-08 63.9 125 40.0
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 1.9e-08 63.5 204 33.8
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.9e-08 63.5 198 32.8
MBI16_g22138_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 2.5e-08 63.2 204 32.4
BcaB02g08048 Brassica carinata HOM05D009495 ORTHO05D004704 4.2e-08 62.4 78 55.1
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 4.2e-08 62.4 214 30.4
BcaC04g21895 Brassica carinata HOM05D009495 ORTHO05D004704 5.5e-08 62.0 77 51.9
C09p26070 Brassica napus HOM05D009495 ORTHO05D004704 5.5e-08 62.0 77 51.9
BolC9t55510H Brassica oleracea HOM05D009495 ORTHO05D004704 5.5e-08 62.0 77 51.9
Carub.0003s2613 Capsella rubella HOM05D009495 ORTHO05D004704 5.5e-08 62.0 126 36.5
BcaC02g09504 Brassica carinata HOM05D009495 ORTHO05D004704 7.2e-08 61.6 77 51.9
C04p43510 Brassica napus HOM05D009495 ORTHO05D004704 7.2e-08 61.6 77 51.9
CARHR216740 Cardamine hirsuta HOM05D009495 ORTHO05D004704 7.2e-08 61.6 79 50.6
AL7G44750 Arabidopsis lyrata HOM05D009495 ORTHO05D004704 9.5e-08 61.2 85 49.4
A09p20650 Brassica napus HOM05D009495 ORTHO05D004704 9.5e-08 61.2 77 51.9
BraA09t37669Z Brassica rapa HOM05D009495 ORTHO05D004704 9.5e-08 61.2 77 51.9
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.2e-07 60.8 171 33.9
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 1.2e-07 60.8 193 31.1
THA.LOC104815364 Tarenaya hassleriana HOM05D005849 ORTHO05D004704 1.2e-07 60.8 81 49.4
Dinv21298 Davidia involucrata HOM05D005849 ORTHO05D004704 1.6e-07 60.5 130 40.8
Thhalv10005712m.g Eutrema salsugineum HOM05D009495 ORTHO05D004704 1.6e-07 60.5 77 51.9
AT5G35870 Arabidopsis thaliana HOM05D009495 ORTHO05D004704 2.1e-07 60.1 83 48.2
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 2.8e-07 59.7 184 32.1
Nitab4.5_0000006g0660 Nicotiana tabacum HOM05D005849 ORTHO05D004704 2.8e-07 59.7 220 32.3
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 3.6e-07 59.3 84 40.5
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 3.6e-07 59.3 165 31.5
Actinidia35203 Actinidia chinensis HOM05D005849 ORTHO05D004704 4.7e-07 58.9 107 41.1
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 4.7e-07 58.9 178 32.6
MSTRG.12249 Avicennia marina HOM05D005849 ORTHO05D004704 8.0e-07 58.2 162 33.3
Aa31sc203G20 Aethionema arabicum HOM05D009495 ORTHO05D004704 1.0e-06 57.8 112 39.3
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 1.4e-06 57.4 104 39.4
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.8e-06 57.0 170 32.9
Peaxi162Scf00802g00130 Petunia axillaris HOM05D005849 ORTHO05D004704 1.8e-06 57.0 82 43.9
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 3.0e-06 56.2 214 31.3
Carub.0007s3167 Capsella rubella HOM05D009495 ORTHO05D004704 4.0e-06 55.8 121 38.8
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 4.0e-06 55.8 89 42.7
ATR0827G126 Amborella trichopoda HOM05D005849 ORTHO05D004704 8.8e-06 54.7 123 37.4
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 8.8e-06 54.7 77 42.9


User provided reference genes

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