Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 5.2e-142 507.7 250 100.0
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 4.0e-134 481.5 250 93.2
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 2.2e-132 475.7 250 91.6
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 3.8e-129 464.9 250 92.0
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 5.0e-129 464.5 250 89.2
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 6.5e-129 464.2 250 90.0
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 3.8e-121 438.3 251 85.3
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 5.6e-120 434.5 250 84.0
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 7.3e-120 434.1 245 84.9
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 6.1e-119 431.0 245 84.1
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 3.0e-118 428.7 250 84.0
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 3.2e-115 418.7 251 82.9
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 8.6e-113 410.6 245 79.2
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 3.4e-109 398.7 245 77.1
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 1.6e-106 389.8 250 74.8
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 3.5e-106 388.7 246 75.2
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 6.0e-106 387.9 196 93.9
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 7.8e-106 387.5 250 74.0
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 5.6e-104 381.3 250 71.2
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 1.2e-103 380.2 248 72.2
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 1.2e-103 380.2 248 71.4
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 3.6e-103 378.6 250 73.6
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 4.7e-103 378.3 247 72.9
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 8.1e-103 377.5 250 73.2
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 1.1e-102 377.1 250 72.0
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 2.3e-102 375.9 250 71.6
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.3e-102 375.9 250 71.6
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 5.2e-102 374.8 250 72.0
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 1.2e-101 373.6 248 72.6
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 2.0e-101 372.9 245 71.8
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 3.4e-101 372.1 250 71.6
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 2.9e-100 369.0 245 71.0
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 3.7e-100 368.6 250 71.2
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 4.9e-100 368.2 246 68.3
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 6.4e-100 367.9 250 70.4
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 2.3e-97 359.4 247 68.8
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 3.9e-97 358.6 247 70.0
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 1.1e-96 357.1 245 67.8
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.5e-96 356.7 246 68.3
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 1.5e-96 356.7 247 68.4
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 2.5e-96 355.9 246 69.9
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 1.2e-95 353.6 246 69.5
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.1e-95 352.8 246 69.1
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 8.1e-95 350.9 251 68.1
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 1.8e-94 349.7 283 61.8
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 1.2e-93 347.1 239 67.8
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 2.0e-93 346.3 274 62.8
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 3.4e-93 345.5 246 66.3
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 4.4e-93 345.1 244 68.4
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 7.6e-93 344.4 242 68.2
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 7.6e-93 344.4 248 67.3
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 2.9e-92 342.4 243 67.1
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 2.9e-92 342.4 250 68.0
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 3.8e-92 342.0 245 67.8
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 4.9e-92 341.7 242 66.9
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 1.1e-91 340.5 243 66.7
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 1.1e-91 340.5 240 65.8
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 3.2e-91 339.0 249 67.1
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 3.2e-91 339.0 246 64.2
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 3.2e-91 339.0 249 68.3
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 7.1e-91 337.8 245 66.5
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 7.1e-91 337.8 200 80.0
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 1.6e-90 336.7 249 66.7
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 3.5e-90 335.5 243 67.9
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 3.5e-90 335.5 243 66.7
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 4.6e-90 335.1 250 65.6
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 4.6e-90 335.1 245 66.9
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 1.0e-89 334.0 250 65.6
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 2.3e-89 332.8 243 65.8
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 3.0e-89 332.4 243 66.7
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.1e-89 331.6 250 66.4
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 2.5e-88 329.3 206 76.2
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 3.3e-88 328.9 250 65.6
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.6e-87 326.6 243 65.8
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 3.6e-87 325.5 216 70.4
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 1.1e-86 323.9 221 70.1
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 1.4e-86 323.6 242 65.7
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 1.4e-86 323.6 242 65.7
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 1.8e-86 323.2 243 64.6
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.8e-86 323.2 243 65.0
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 4.0e-86 322.0 243 64.6
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 4.0e-86 322.0 206 73.8
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 4.0e-86 322.0 243 65.4
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 5.2e-86 321.6 248 63.7
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 6.9e-86 321.2 245 63.7
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.5e-85 320.1 250 63.2
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 5.8e-85 318.2 205 75.1
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 2.4e-83 312.8 246 63.4
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 6.0e-82 308.1 216 68.5
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 1.3e-79 300.4 258 59.3
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 1.8e-78 296.6 245 60.4
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 1.7e-76 290.0 182 75.3
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 4.9e-76 288.5 216 64.8
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 1.4e-75 287.0 216 63.4
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.9e-75 286.6 275 56.4
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 9.3e-75 284.3 192 68.8
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 2.7e-74 282.7 217 64.5
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 2.7e-74 282.7 217 64.5
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 1.0e-73 280.8 217 64.5
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 3.9e-73 278.9 217 64.1
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 3.9e-73 278.9 203 65.5
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 5.1e-73 278.5 244 58.2
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 9.6e-72 274.2 232 60.8
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 2.4e-70 269.6 194 68.0
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 5.3e-70 268.5 245 54.3
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 9.0e-70 267.7 244 62.7
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 1.2e-69 267.3 243 56.0
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 5.8e-69 265.0 246 52.0
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 4.9e-68 261.9 248 55.2
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 2.4e-67 259.6 183 64.5
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.1e-66 256.5 243 50.6
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.0e-65 254.2 245 51.0
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 7.4e-64 248.1 144 82.6
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.6e-63 246.9 220 57.7
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.8e-62 243.4 165 69.7
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 3.4e-61 239.2 242 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.7e-60 236.9 200 54.0
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 3.8e-60 235.7 243 47.7
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 6.5e-60 235.0 198 60.6
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 6.5e-60 235.0 196 59.7
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 3.3e-56 222.6 179 63.7
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 4.3e-56 222.2 222 49.1
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 3.7e-55 219.2 163 63.2
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-53 213.0 218 49.5
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 7.6e-53 211.5 214 49.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 8.5e-52 208.0 172 59.9
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 1.4e-51 207.2 227 51.1
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 7.2e-51 204.9 180 58.3
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 8.7e-49 198.0 137 69.3
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 2.5e-48 196.4 194 52.1
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 5.7e-48 195.3 193 49.7
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 2.4e-46 189.9 237 48.1
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 4.2e-43 179.1 114 75.4
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 4.6e-42 175.6 192 50.5
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 6.7e-41 171.8 110 78.2
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 3.1e-38 162.9 105 72.4
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 3.1e-38 162.9 219 40.6
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 2.9e-36 156.4 110 64.5
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 2.7e-34 149.8 108 63.9
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 4.7e-34 149.1 103 67.0
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 4.7e-34 149.1 225 43.1
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 3.1e-30 136.3 161 49.1
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 5.3e-22 109.0 99 55.6
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 4.5e-21 105.9 163 36.8
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 5.2e-17 92.4 67 65.7
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 3.4e-16 89.7 65 60.0
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.2e-15 87.0 72 56.9
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 6.5e-12 75.5 72 52.8
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.6e-10 69.7 61 54.1
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-09 67.8 81 43.2
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 4.0e-09 66.2 376 21.8
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.8e-07 60.1 80 38.8


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