Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06366_v3 Cicer arietinum L. HOM05D000458 ORTHO05D006027 1.1e-132 476.9 284 100.0
Ca_06365_v3 Cicer arietinum L. HOM05D000458 ORTHO05D006027 1.2e-113 413.7 259 98.5
Ca_04994_v3 Cicer arietinum L. HOM05D000458 ORTHO05D006027 2.2e-112 409.5 259 98.1
Medtr5g045190 Medicago truncatula HOM05D000458 ORTHO05D006027 4.0e-82 308.9 262 78.6
Lj2g0022401 Lotus japonicus HOM05D000458 ORTHO05D006027 2.6e-73 279.6 265 64.2
TPR.G23717 Trifolium pratense HOM05D000458 ORTHO05D006027 8.9e-66 254.6 259 72.2
arahy.Tifrunner.gnm1.ann1.PB2NQ7 Arachis hypogaea HOM05D000458 ORTHO05D006027 3.8e-64 249.2 265 66.4
Lalb_Chr04g0255591 Lupinus albus HOM05D000458 ORTHO05D006027 3.8e-64 249.2 257 62.6
arahy.Tifrunner.gnm1.ann1.ALPQ20 Arachis hypogaea HOM05D000458 ORTHO05D006027 2.1e-62 243.4 267 65.2
Glyma.01G061500 Glycine max HOM05D000458 ORTHO05D006027 2.7e-62 243.0 267 63.7
Psat2g132400 Pisum sativum HOM05D000458 ORTHO05D006027 6.0e-62 241.9 259 57.1
Glyma.02G119700 Glycine max HOM05D000458 ORTHO05D006027 8.7e-61 238.0 270 69.6
Phvul.003G041000 Phaseolus vulgaris HOM05D000458 ORTHO05D006027 6.9e-58 228.4 266 66.9
MELO3C014978.2 Cucumis melo HOM05D000458 ORTHO05D006027 2.3e-45 186.8 273 54.2
MD13G1060400 Malus domestica HOM05D000458 ORTHO05D006027 6.7e-45 185.3 263 51.3
MD16G1059600 Malus domestica HOM05D000458 ORTHO05D006027 4.8e-43 179.1 263 50.2
CsaV3_5G015170 Cucumis sativus L. HOM05D000458 ORTHO05D006027 5.3e-42 175.6 276 51.1
Prupe.1G289000 Prunus persica HOM05D000458 ORTHO05D006027 9.0e-42 174.9 269 53.9
ClCG07G007070 Citrullus lanatus HOM05D000458 ORTHO05D006027 1.3e-40 171.0 271 48.0
ClCG11G011620 Citrullus lanatus HOM05D000458 ORTHO05D006027 1.7e-40 170.6 270 47.8
Manes.05G112600 Manihot esculenta HOM05D000458 ORTHO05D006027 3.8e-40 169.5 264 51.1
Sed0001565 Sechium edule HOM05D000458 ORTHO05D006027 6.5e-40 168.7 273 48.4
Actinidia12919 Actinidia chinensis HOM05D000458 ORTHO05D006027 3.9e-37 159.5 268 47.4
Dinv34058 Davidia involucrata HOM05D000458 ORTHO05D006027 6.7e-37 158.7 272 51.1
Dinv16741 Davidia involucrata HOM05D000458 ORTHO05D006027 1.1e-34 151.4 193 54.9
Nn3g17488 Nelumbo nucifera HOM05D000458 ORTHO05D006027 4.1e-34 149.4 275 45.8
Actinidia28648 Actinidia chinensis HOM05D000458 ORTHO05D006027 9.0e-34 148.3 271 47.6
TWI75G1410 Tripterygium wilfordii HOM05D000458 ORTHO05D006027 1.5e-33 147.5 279 41.9
CiPaw.05G124100 Carya illinoinensis HOM05D000458 ORTHO05D006027 1.7e-32 144.1 172 55.8
Hma1.2p1_0566F.1_g179880 Hydrangea macrophylla HOM05D000458 ORTHO05D006027 3.8e-32 142.9 194 51.5
FAN17G2936 Fragaria x ananassa HOM05D000458 ORTHO05D006027 6.5e-32 142.1 263 44.5
Gohir.A12G160300 Gossypium hirsutum HOM05D000458 ORTHO05D006027 1.9e-31 140.6 260 45.0
Gohir.D12G163700 Gossypium hirsutum HOM05D000458 ORTHO05D006027 1.9e-31 140.6 258 45.7
PGR119G1610 Punica granatum HOM05D000458 ORTHO05D006027 4.2e-31 139.4 264 45.8
Gorai.008G176300 Gossypium raimondii HOM05D000458 ORTHO05D006027 5.5e-31 139.0 258 44.6
Haze_11893 Corylus avellana HOM05D000458 ORTHO05D006027 1.2e-30 137.9 168 57.7
Eucgr.G02433 Eucalyptus grandis HOM05D000458 ORTHO05D006027 6.1e-30 135.6 280 45.4
Lj6A777T46 Lonicera japonica HOM05D000458 ORTHO05D006027 1.8e-29 134.0 196 50.0
Aa31sc367G80 Aethionema arabicum HOM05D000458 ORTHO05D006027 2.3e-29 133.7 298 47.7
AL2G28310 Arabidopsis lyrata HOM05D000458 ORTHO05D006027 3.0e-29 133.3 273 48.0
THA.LOC104801732 Tarenaya hassleriana HOM05D000458 ORTHO05D006027 3.9e-29 132.9 262 44.7
Cpa.g.sc1.142 Carica papaya HOM05D000458 ORTHO05D006027 5.1e-29 132.5 277 46.6
Sabra10G0119400 Salix brachista HOM05D003222 ORTHO05D006027 1.1e-28 131.3 272 42.3
AT1G69220 Arabidopsis thaliana HOM05D000458 ORTHO05D006027 1.5e-28 131.0 274 48.2
Lsat_1_v5_gn_8_46480 Lactuca sativa HOM05D000458 ORTHO05D006027 1.9e-28 130.6 270 43.0
GSVIVG01012233001 Vitis vinifera HOM05D000458 ORTHO05D006027 5.7e-28 129.0 254 42.1
Carub.0002s1581 Capsella rubella HOM05D000458 ORTHO05D006027 9.7e-28 128.3 275 48.7
RcHm_v2.0_Chr4g0438031 Rosa chinensis HOM05D000458 ORTHO05D006027 1.3e-27 127.9 260 43.8
CARHR062100 Cardamine hirsuta HOM05D000458 ORTHO05D006027 2.8e-27 126.7 275 49.5
Sp5g24270 Schrenkiella parvula HOM05D000458 ORTHO05D006027 4.8e-27 125.9 265 48.7
COL.COLO4_27862 Corchorus olitorius HOM05D000458 ORTHO05D006027 1.8e-26 124.0 267 47.2
Duzib248G0993 Durio zibethinus HOM05D000458 ORTHO05D006027 1.8e-26 124.0 264 48.1
THA.LOC104822005 Tarenaya hassleriana HOM05D000458 ORTHO05D006027 1.2e-25 121.3 260 38.1
Thhalv10018124m.g Eutrema salsugineum HOM05D000458 ORTHO05D006027 1.0e-24 118.2 269 48.7
HanXRQChr12g0363161 Helianthus annuus HOM05D000458 ORTHO05D006027 1.0e-24 118.2 265 47.2
Hma1.2p1_0566F.1_g179890 Hydrangea macrophylla HOM05D000458 ORTHO05D006027 1.3e-24 117.9 164 49.4
FAN12G2330 Fragaria x ananassa HOM05D000458 ORTHO05D006027 2.2e-24 117.1 255 46.7
FvH4_4g29800 Fragaria vesca HOM05D000458 ORTHO05D006027 2.9e-24 116.7 256 46.5
QL03p073857 Quercus lobata HOM05D000458 ORTHO05D006027 8.5e-24 115.2 272 46.3
A02p15720 Brassica napus HOM05D000458 ORTHO05D006027 5.5e-23 112.5 264 48.9
BraA02t06633Z Brassica rapa HOM05D000458 ORTHO05D006027 5.5e-23 112.5 264 48.9
AUR62007903 Chenopodium quinoa HOM05D000458 ORTHO05D006027 1.6e-22 110.9 226 38.5
FAN22G1313 Fragaria x ananassa HOM05D000458 ORTHO05D006027 2.1e-22 110.5 251 40.2
Gohir.D02G130100 Gossypium hirsutum HOM05D000458 ORTHO05D006027 2.1e-22 110.5 263 33.5
vmacro20926 Vaccinium macrocarpon HOM05D000458 ORTHO05D006027 2.7e-22 110.2 205 43.4
Gohir.A03G104900 Gossypium hirsutum HOM05D000458 ORTHO05D006027 4.6e-22 109.4 263 41.1
Rhsim09G0126200 Rhododendron simsii HOM05D003222 ORTHO05D006027 7.9e-22 108.6 261 39.8
Solyc05g012130.4 Solanum lycopersicum HOM05D000458 ORTHO05D006027 7.9e-22 108.6 256 44.5
Sopen05g006920 Solanum pennellii HOM05D000458 ORTHO05D006027 7.9e-22 108.6 256 44.5
Gorai.005G146100 Gossypium raimondii HOM05D000458 ORTHO05D006027 1.0e-21 108.2 263 36.9
Potri.010G157400 Populus trichocarpa HOM05D000458 ORTHO05D006027 1.0e-21 108.2 265 38.5
Ah.03g138830 Amaranthus hybridus HOM05D000458 ORTHO05D006027 9.7e-20 101.7 316 33.5
Atru.chr11.1613 Acer truncatum HOM05D000458 ORTHO05D006027 1.3e-19 101.3 255 41.2
ECA233G3497 Erigeron canadensis HOM05D000458 ORTHO05D006027 1.3e-19 101.3 263 39.9
Nitab4.5_0000231g0080 Nicotiana tabacum HOM05D000458 ORTHO05D006027 1.8e-18 97.4 237 40.5
SGA_v2.0_scaffold36G14468 Striga asiatica HOM05D000458 ORTHO05D006027 6.9e-18 95.5 284 35.6
Peaxi162Scf00175g00431 Petunia axillaris HOM05D000458 ORTHO05D006027 9.1e-18 95.1 111 53.2
Hund25167 Selenicereus undatus HOM05D000458 ORTHO05D006027 1.5e-17 94.4 274 33.6
ATR0712G038 Amborella trichopoda HOM05D000458 ORTHO05D006027 2.0e-17 94.0 247 34.4
Oeu055097.3 Olea europaea HOM05D000458 ORTHO05D006027 4.5e-17 92.8 192 40.1
Ciclev10030733m.g Citrus clementina HOM05D000458 ORTHO05D006027 5.0e-16 89.4 187 40.6
EL10Ac6g15014 Beta vulgaris HOM05D000458 ORTHO05D006027 6.5e-16 89.0 247 38.9
TAR629G2633 Trochodendron aralioides HOM05D000458 ORTHO05D006027 3.2e-15 86.7 69 66.7
Oeu028264.3 Olea europaea HOM05D000458 ORTHO05D006027 9.4e-15 85.1 218 38.1
CAN.G707.17 Capsicum annuum HOM05D000458 ORTHO05D006027 1.2e-14 84.7 106 51.9
Sc04g0007520 Simmondsia chinensis HOM05D000458 ORTHO05D006027 1.0e-13 81.6 174 40.8
C06p40690 Brassica napus HOM05D000458 ORTHO05D006027 2.3e-13 80.5 253 34.0
BolC6t39363H Brassica oleracea HOM05D000458 ORTHO05D006027 6.7e-13 79.0 257 36.6
Thecc.02G328300 Theobroma cacao HOM05D000458 ORTHO05D006027 1.1e-12 78.2 106 47.2
PSO478G4292 Papaver somniferum HOM05D000458 ORTHO05D006027 2.6e-12 77.0 259 36.7
MSTRG.7737 Avicennia marina HOM05D000458 ORTHO05D006027 4.4e-12 76.3 295 33.9
AUR62003086 Chenopodium quinoa HOM05D000458 ORTHO05D006027 4.4e-12 76.3 73 57.5
CDE10G0108 Ceratophyllum demersum HOM05D000458 ORTHO05D006027 5.7e-12 75.9 256 31.6
HPP92_019203 Vanilla planifolia HOM05D000458 ORTHO05D006027 1.3e-11 74.7 257 33.5
vmacro10434 Vaccinium macrocarpon HOM05D000458 ORTHO05D006027 1.7e-11 74.3 191 37.7
Aqoxy3G03651 Aquilegia oxysepala HOM05D000458 ORTHO05D006027 2.8e-11 73.6 281 35.6
Nitab4.5_0007734g0050 Nicotiana tabacum HOM05D000458 ORTHO05D006027 2.8e-11 73.6 207 40.1
PSO017G2361 Papaver somniferum HOM05D000458 ORTHO05D006027 2.8e-11 73.6 264 34.5
SHI29150 Sapria himalayana HOM05D000458 ORTHO05D006027 6.3e-11 72.4 188 34.0
unitig_8.g3452 Utricularia gibba HOM05D000458 ORTHO05D006027 1.1e-10 71.6 98 46.9
A07p35550 Brassica napus HOM05D000458 ORTHO05D006027 1.6e-09 67.8 266 32.7
BraA07t31143Z Brassica rapa HOM05D000458 ORTHO05D006027 1.6e-09 67.8 266 32.7
Actinidia16156 Actinidia chinensis HOM05D000458 ORTHO05D006027 2.0e-09 67.4 180 42.2
SEGI_34787 Sequoiadendron giganteum HOM05D000458 ORTHO05D006027 3.5e-09 66.6 256 27.3
Os03g0755000 Oryza sativa ssp. japonica HOM05D000458 ORTHO05D006027 2.2e-08 63.9 239 31.4
C02p26170 Brassica napus HOM05D000458 ORTHO05D006027 5.0e-08 62.8 105 41.0
BolC2t08683H Brassica oleracea HOM05D000458 ORTHO05D006027 5.0e-08 62.8 105 41.0
Cfa008866 Carpinus fangiana HOM05D000458 ORTHO05D006027 6.1e-06 55.8 60 58.3


User provided reference genes

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