Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06361_v3 Cicer arietinum L. HOM05D001360 ORTHO05D001231 1.7e-88 329.3 171 100.0
Ah.16g102780 Amaranthus hybridus HOM05D001360 ORTHO05D001231 1.0e-11 74.3 160 31.9
PGR142G4181 Punica granatum HOM05D001360 ORTHO05D001231 8.4e-11 71.2 159 34.0
Medtr3g069580 Medicago truncatula HOM05D001360 ORTHO05D001231 1.9e-10 70.1 169 33.7
CiPaw.01G293400 Carya illinoinensis HOM05D001360 ORTHO05D001231 2.1e-09 66.6 165 31.5
Ca_17129_v3 Cicer arietinum L. HOM05D001360 ORTHO05D001231 2.1e-09 66.6 169 32.0
CANSAT56G4295 Cannabis sativa HOM05D001360 ORTHO05D001231 2.7e-09 66.2 164 29.9
THA.LOC104826865 Tarenaya hassleriana HOM05D001360 ORTHO05D001231 3.5e-09 65.9 168 31.5
FAN01G2180 Fragaria x ananassa HOM05D000346 ORTHO05D000326 7.9e-09 64.7 162 34.0
Phvul.001G238400 Phaseolus vulgaris HOM05D001360 ORTHO05D001231 1.0e-08 64.3 174 30.5
Hund16037 Selenicereus undatus HOM05D001360 ORTHO05D001672 1.3e-08 63.9 131 30.5
PGSC0003DMG400027138 Solanum tuberosum HOM05D001360 ORTHO05D001231 1.8e-08 63.5 161 32.3
VMungo1383G2175 Vigna mungo HOM05D001360 ORTHO05D001231 1.8e-08 63.5 174 29.3
FAN10G1779 Fragaria x ananassa HOM05D000346 ORTHO05D000326 2.3e-08 63.2 162 33.3
arahy.Tifrunner.gnm1.ann1.H8QPA0 Arachis hypogaea HOM05D000346 ORTHO05D000326 3.0e-08 62.8 175 30.3
Glyma.18G032200 Glycine max HOM05D001360 ORTHO05D001231 3.0e-08 62.8 177 28.8
Sopen05g031510 Solanum pennellii HOM05D001360 ORTHO05D001231 3.0e-08 62.8 161 32.3
FvH4_7g23601 Fragaria vesca HOM05D001360 ORTHO05D001231 3.9e-08 62.4 161 33.5
TAR369G0700 Trochodendron aralioides HOM05D001360 ORTHO05D001231 3.9e-08 62.4 163 28.2
Lalb_Chr20g0116751 Lupinus albus HOM05D001360 ORTHO05D001231 5.1e-08 62.0 173 29.5
Oeu016799.1 Olea europaea HOM05D001360 ORTHO05D001231 5.1e-08 62.0 165 32.7
FAN03G2360 Fragaria x ananassa HOM05D001360 ORTHO05D001231 6.7e-08 61.6 162 33.3
DCAR_024853 Daucus carota HOM05D001360 ORTHO05D001231 8.7e-08 61.2 168 29.8
Hma1.2p1_0026F.1_g016630 Hydrangea macrophylla HOM05D001360 ORTHO05D001231 8.7e-08 61.2 163 30.1
Lj6g0026388 Lotus japonicus HOM05D001360 ORTHO05D001231 8.7e-08 61.2 172 30.8
Aa31LG11G6980 Aethionema arabicum HOM05D001360 ORTHO05D001231 1.1e-07 60.8 156 31.4
Carub.0006s0483 Capsella rubella HOM05D001360 ORTHO05D001231 1.1e-07 60.8 169 31.4
CAN.G1184.10 Capsicum annuum HOM05D001360 ORTHO05D001231 1.1e-07 60.8 166 31.3
CARHR207270 Cardamine hirsuta HOM05D001360 ORTHO05D001231 1.5e-07 60.5 172 31.4
Ciclev10033990m.g Citrus clementina HOM05D001360 ORTHO05D001231 1.5e-07 60.5 171 28.7
Dinv16277 Davidia involucrata HOM05D001360 ORTHO05D001231 1.5e-07 60.5 162 30.2
QL08p062058 Quercus lobata HOM05D001360 ORTHO05D001231 1.5e-07 60.5 172 29.1
Sp6g36950 Schrenkiella parvula HOM05D001360 ORTHO05D001231 1.5e-07 60.5 169 31.4
CSS0022666 Camellia sinensis var. sinensis HOM05D001360 ORTHO05D001231 1.9e-07 60.1 169 29.0
Eucgr.G03001 Eucalyptus grandis HOM05D001360 ORTHO05D001231 1.9e-07 60.1 164 28.7
Lsat_1_v5_gn_2_117080 Lactuca sativa HOM05D001360 ORTHO05D001231 1.9e-07 60.1 164 31.1
COL.COLO4_25571 Corchorus olitorius HOM05D001360 ORTHO05D001231 2.5e-07 59.7 174 30.5
AL6G15880 Arabidopsis lyrata HOM05D001360 ORTHO05D001231 3.3e-07 59.3 169 30.8
Thhalv10014825m.g Eutrema salsugineum HOM05D001360 ORTHO05D001231 3.3e-07 59.3 169 30.8
MD01G1141800 Malus domestica HOM05D001360 ORTHO05D001231 4.3e-07 58.9 162 29.0
AT5G05950 Arabidopsis thaliana HOM05D001360 ORTHO05D001231 7.4e-07 58.2 169 30.8
C09p70850 Brassica napus HOM05D001360 ORTHO05D001231 7.4e-07 58.2 173 30.6
Cfa001397 Carpinus fangiana HOM05D001360 ORTHO05D001231 7.4e-07 58.2 165 27.9
BcaC06g32305 Brassica carinata HOM05D001360 ORTHO05D001231 9.7e-07 57.8 173 30.6
BcaNung07342 Brassica carinata HOM05D001360 ORTHO05D001231 9.7e-07 57.8 170 30.6
BolC9t59844H Brassica oleracea HOM05D001360 ORTHO05D001231 9.7e-07 57.8 173 30.6
Manes.07G122700 Manihot esculenta HOM05D001360 ORTHO05D001231 9.7e-07 57.8 170 27.6
Actinidia02900 Actinidia chinensis HOM05D001360 ORTHO05D001231 1.3e-06 57.4 172 29.1
Cc02_g07210 Coffea canephora HOM05D000346 ORTHO05D000326 1.3e-06 57.4 166 27.7
Lj2P1114T30 Lonicera japonica HOM05D001360 ORTHO05D001231 1.3e-06 57.4 163 27.6
Manes.10G021100 Manihot esculenta HOM05D001360 ORTHO05D001231 1.3e-06 57.4 170 27.6
Sabra10G0150800 Salix brachista HOM05D001360 ORTHO05D001231 1.3e-06 57.4 169 30.8
Thecc.10G031000 Theobroma cacao HOM05D001360 ORTHO05D001231 1.3e-06 57.4 176 31.2
TWI15G0390 Tripterygium wilfordii HOM05D001360 ORTHO05D001231 1.3e-06 57.4 166 30.1
MSTRG.12746 Avicennia marina HOM05D001360 ORTHO05D001231 1.6e-06 57.0 163 28.8
CiPaw.13G057500 Carya illinoinensis HOM05D001360 ORTHO05D001231 1.6e-06 57.0 163 28.2
Gohir.D07G167900 Gossypium hirsutum HOM05D001360 ORTHO05D001231 1.6e-06 57.0 165 27.9
Lj8C75T3 Lonicera japonica HOM05D001360 ORTHO05D001231 1.6e-06 57.0 168 28.6
Rhsim03G0137800 Rhododendron simsii HOM05D001360 ORTHO05D001231 1.6e-06 57.0 170 30.0
A10p30410 Brassica napus HOM05D001360 ORTHO05D001231 2.2e-06 56.6 170 30.0
BraA10t45080Z Brassica rapa HOM05D001360 ORTHO05D001231 2.2e-06 56.6 170 30.0
CSS0034994 Camellia sinensis var. sinensis HOM05D001360 ORTHO05D001231 2.2e-06 56.6 165 27.9
SGA_v2.0_scaffold77G25308 Striga asiatica HOM05D001360 ORTHO05D001231 2.2e-06 56.6 163 28.8
TAR633G2651 Trochodendron aralioides HOM05D001360 ORTHO05D001231 2.2e-06 56.6 171 26.9
HanXRQChr07g0202021 Helianthus annuus HOM05D001360 ORTHO05D001231 2.8e-06 56.2 172 29.7
Rhsim13G0054500 Rhododendron simsii HOM05D001360 ORTHO05D001231 2.8e-06 56.2 163 26.4
Gorai.N002200 Gossypium raimondii HOM05D001360 ORTHO05D001231 3.7e-06 55.8 163 27.6
Potri.010G196100 Populus trichocarpa HOM05D001360 ORTHO05D001231 3.7e-06 55.8 173 28.9
PGR119G1765 Punica granatum HOM05D001360 ORTHO05D001231 3.7e-06 55.8 180 28.3
SEGI_27219 Sequoiadendron giganteum HOM05D001360 ORTHO05D001231 3.7e-06 55.8 163 27.0
CSS0047701 Camellia sinensis var. sinensis HOM05D001360 ORTHO05D001231 4.8e-06 55.5 163 30.1
DCAR_008397 Daucus carota HOM05D001360 ORTHO05D001231 4.8e-06 55.5 163 27.6
Duzib211G0121 Durio zibethinus HOM05D001360 ORTHO05D001231 6.3e-06 55.1 163 27.0
MBI05_g02672_MAGBIO Magnolia biondii HOM05D001360 ORTHO05D001231 6.3e-06 55.1 178 25.8
Nn2g13530 Nelumbo nucifera HOM05D001360 ORTHO05D001231 8.2e-06 54.7 170 29.4


User provided reference genes

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