Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 2.2e-252 875.2 454 100.0
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 4.1e-222 774.6 442 89.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 6.4e-215 750.7 440 86.6
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 8.3e-215 750.4 440 86.6
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 1.6e-213 746.1 440 86.1
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 5.9e-213 744.2 441 85.7
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 6.6e-212 740.7 439 85.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 7.3e-211 737.3 441 85.0
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 9.5e-211 736.9 440 84.8
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.2e-208 729.9 442 83.7
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.7e-197 692.2 440 80.9
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 2.7e-197 692.2 439 78.6
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.3e-196 689.9 440 77.5
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.7e-196 689.5 440 77.0
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.1e-196 688.0 440 76.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.9e-195 686.0 440 75.7
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.5e-195 685.6 439 78.4
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 4.3e-195 684.9 440 76.6
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 2.4e-193 679.1 440 76.1
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 5.2e-193 677.9 440 76.4
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 8.9e-193 677.2 440 75.2
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.4e-192 674.9 440 76.6
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 2.9e-191 672.2 440 76.4
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 3.8e-191 671.8 440 75.7
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 4.9e-191 671.4 440 74.1
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 6.4e-191 671.0 440 75.7
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.4e-190 669.8 440 74.3
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.9e-190 669.5 440 74.8
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 2.4e-190 669.1 440 74.8
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 3.2e-190 668.7 440 76.4
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 7.8e-189 664.1 424 78.1
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.3e-188 663.3 440 74.3
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.3e-188 663.3 440 74.3
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 3.0e-188 662.1 439 74.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 3.0e-188 662.1 440 74.3
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 1.1e-187 660.2 440 75.0
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 2.5e-187 659.1 440 74.8
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.5e-187 659.1 440 74.1
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 2.5e-187 659.1 440 74.3
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 5.6e-187 657.9 440 73.0
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 9.6e-187 657.1 440 73.6
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.2e-186 656.8 440 73.2
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.1e-186 654.1 440 75.2
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.2e-184 650.2 440 77.3
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.5e-184 649.8 440 74.3
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.4e-184 648.7 440 72.3
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.6e-184 647.5 440 74.1
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 1.3e-183 646.7 440 72.5
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.7e-183 646.4 440 73.6
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 2.2e-183 646.0 440 72.7
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 4.2e-182 641.7 440 69.3
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.2e-181 640.2 440 71.1
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.6e-181 639.8 440 72.0
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 2.7e-181 639.0 440 72.3
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 4.6e-181 638.3 439 72.2
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 4.6e-181 638.3 438 71.5
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.3e-180 636.7 439 71.8
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.7e-180 636.3 440 71.6
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.1e-179 633.6 440 71.1
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 4.8e-178 628.2 440 72.3
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 1.1e-177 627.1 417 75.5
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.4e-177 626.7 460 68.9
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 1.8e-177 626.3 440 70.7
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 1.5e-176 623.2 439 67.7
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 3.4e-176 622.1 441 70.3
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 4.5e-176 621.7 439 69.9
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 5.8e-176 621.3 440 67.3
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 9.9e-176 620.5 439 70.2
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.3e-175 620.2 439 69.9
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 4.9e-175 618.2 439 69.9
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.2e-174 615.5 439 69.5
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.2e-174 615.5 439 69.9
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 9.3e-174 614.0 452 68.6
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 9.3e-174 614.0 439 70.2
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 1.2e-173 613.6 440 69.8
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 2.1e-173 612.8 440 68.6
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 3.5e-173 612.1 440 69.5
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 2.3e-172 609.4 440 69.8
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.5e-171 606.7 439 65.8
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 4.5e-168 595.1 470 64.0
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.5e-168 595.1 440 70.0
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 4.5e-168 595.1 440 67.0
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 2.2e-167 592.8 440 64.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 4.9e-167 591.7 440 66.6
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 4.6e-165 585.1 450 66.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.0e-164 582.4 447 64.9
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 2.8e-162 575.9 417 69.3
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 2.4e-161 572.8 417 68.8
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 3.3e-155 552.4 453 61.1
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 9.7e-155 550.8 453 60.5
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 4.8e-154 548.5 440 64.8
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 4.8e-154 548.5 440 63.9
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 5.5e-150 535.0 438 60.7
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.3e-148 529.6 438 59.4
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 6.3e-146 521.5 487 57.5
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.4e-145 520.4 371 69.5
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 2.5e-134 483.0 385 64.2
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 7.4e-131 471.5 440 51.6
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 8.2e-130 468.0 440 56.4
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.4e-129 466.5 353 66.3
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.1e-121 439.1 314 67.5
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 9.1e-121 438.0 438 49.5
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.3e-119 434.1 441 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 9.4e-118 427.9 440 48.6
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.7e-117 426.4 441 47.6
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.0e-116 422.5 280 72.9
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 4.5e-112 409.1 439 46.0
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.7e-111 407.1 307 69.7
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 6.8e-108 395.2 439 45.1
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 3.5e-72 276.6 453 35.1
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 8.7e-63 245.4 425 33.9
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 1.9e-57 227.6 151 76.8
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 4.6e-56 223.0 136 83.1
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.5e-51 208.0 387 39.8
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 7.9e-40 169.1 107 78.5
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 6.5e-34 149.4 92 82.6
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 8.5e-34 149.1 192 43.8
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 2.5e-33 147.5 437 24.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 1.0e-31 142.1 109 67.0
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 6.7e-31 139.4 94 80.9
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 5.1e-23 113.2 68 79.4
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 3.3e-22 110.5 111 57.7
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 4.1e-20 103.6 195 35.9
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 2.9e-18 97.4 220 33.6
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 5.0e-18 96.7 120 50.8
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 6.5e-18 96.3 206 33.5
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 5.7e-14 83.2 79 59.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.5e-06 58.5 35 74.3


User provided reference genes

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