Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.3e-88 329.7 174 100.0
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.7e-51 206.5 195 67.2
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 2.1e-49 199.5 188 64.4
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.4e-48 196.8 198 63.6
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.5e-47 193.4 190 62.6
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.3e-46 190.3 183 64.5
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.7e-43 179.9 188 61.2
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 8.2e-38 161.0 181 56.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 1.4e-37 160.2 185 56.2
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 5.9e-36 154.8 181 54.1
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 2.9e-35 152.5 195 51.3
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.1e-34 150.6 184 52.2
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 2.5e-34 149.4 191 50.3
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.6e-33 146.7 179 55.3
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.1e-33 144.8 189 50.3
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 8.0e-33 144.4 180 51.1
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.0e-32 144.1 187 51.3
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 5.2e-32 141.7 182 50.5
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 5.2e-32 141.7 194 50.5
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.5e-31 140.2 180 51.7
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.6e-31 139.4 190 50.0
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 2.6e-31 139.4 184 49.5
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 3.4e-31 139.0 186 47.3
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 5.7e-31 138.3 179 50.3
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 7.5e-31 137.9 185 49.2
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 9.8e-31 137.5 184 51.6
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 9.8e-31 137.5 185 49.7
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 9.8e-31 137.5 190 48.4
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.7e-30 136.7 169 53.3
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.8e-30 136.0 202 44.6
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 3.7e-30 135.6 178 50.6
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.8e-29 133.3 226 42.0
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.2e-28 130.6 188 49.5
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.2e-28 130.6 186 48.4
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 2.0e-28 129.8 205 42.4
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 4.5e-28 128.6 196 45.9
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 5.9e-28 128.3 203 42.9
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.0e-27 127.5 177 47.5
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.7e-27 126.7 189 47.1
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 6.5e-27 124.8 190 46.8
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 8.6e-27 124.4 173 46.2
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.1e-26 124.0 186 47.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.9e-26 123.2 186 45.2
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.9e-26 123.2 196 46.4
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.5e-26 122.9 197 41.6
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.5e-26 122.9 197 41.6
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.3e-26 122.5 215 41.9
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.3e-26 122.5 211 40.8
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.5e-26 121.7 211 40.8
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 7.2e-26 121.3 207 39.6
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 9.5e-26 120.9 168 50.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 9.5e-26 120.9 185 44.3
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.2e-25 120.6 179 43.0
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.2e-25 120.6 185 44.3
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.6e-25 120.2 207 43.5
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.6e-25 120.2 175 46.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.8e-25 119.4 185 43.2
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 4.7e-25 118.6 183 43.7
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 4.7e-25 118.6 200 46.0
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 4.7e-25 118.6 176 46.6
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 8.0e-25 117.9 200 41.5
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.0e-24 117.5 201 44.3
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.8e-24 116.7 201 39.8
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 5.2e-24 115.2 171 46.2
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 6.8e-24 114.8 203 38.4
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 8.9e-24 114.4 158 49.4
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.6e-23 112.8 184 42.4
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.4e-23 112.5 197 39.6
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 5.7e-23 111.7 181 44.8
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 8.3e-22 107.8 210 41.0
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.1e-21 107.5 174 43.1
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.1e-21 107.5 217 39.2
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.8e-21 106.7 200 43.5
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.4e-21 106.3 182 41.2
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.1e-21 105.9 200 39.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.1e-21 105.5 197 40.6
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 4.1e-21 105.5 179 42.5
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 9.2e-21 104.4 153 45.1
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.2e-20 104.0 172 41.9
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.7e-20 102.8 170 45.9
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.0e-19 100.9 179 41.9
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.3e-18 95.9 221 36.2
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 2.1e-17 93.2 171 42.7
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 3.0e-16 89.4 146 45.9
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.2e-15 87.4 99 54.5
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 7.5e-15 84.7 171 38.0
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.7e-14 83.6 223 35.4
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 4.9e-14 82.0 198 33.3
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 4.9e-14 82.0 132 39.4
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.4e-13 78.6 97 49.5
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 7.8e-12 74.7 160 38.1
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.9e-10 70.1 133 39.8
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 5.6e-10 68.6 143 43.4
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 8.0e-09 64.7 164 37.2
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 8.0e-09 64.7 155 33.5


User provided reference genes

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