Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06207_v3 Cicer arietinum L. HOM05D001657 ORTHO05D149008 1.2e-73 280.0 173 100.0
Ca_06192_v3 Cicer arietinum L. HOM05D002213 ORTHO05D002297 3.5e-49 198.7 228 55.3
Lsat_1_v5_gn_6_68221 Lactuca sativa HOM05D002213 ORTHO05D002297 2.6e-07 59.7 88 42.0
TWI79G1672 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 4.4e-07 58.9 96 46.9
GSVIVG01037287001 Vitis vinifera HOM05D001657 ORTHO05D001557 4.4e-07 58.9 96 46.9
CANSAT54G0751 Cannabis sativa HOM05D001657 ORTHO05D001557 5.7e-07 58.5 96 46.9
TWI75G1395 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 7.5e-07 58.2 96 45.8
ClCG03G012550 Citrullus lanatus HOM05D001657 ORTHO05D001557 9.8e-07 57.8 96 45.8
MELO3C015111.2 Cucumis melo HOM05D001657 ORTHO05D001557 9.8e-07 57.8 96 45.8
CsaV3_1G043460 Cucumis sativus L. HOM05D001657 ORTHO05D001557 9.8e-07 57.8 96 45.8
Potri.001G275200 Populus trichocarpa HOM05D001657 ORTHO05D001557 9.8e-07 57.8 96 45.8
Sed0002817 Sechium edule HOM05D001657 ORTHO05D001557 9.8e-07 57.8 96 45.8
Eucgr.B03736 Eucalyptus grandis HOM05D001657 ORTHO05D001557 1.3e-06 57.4 96 45.8
Atru.chr3.2890 Acer truncatum HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Actinidia06967 Actinidia chinensis HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
ATR0745G037 Amborella trichopoda HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
arahy.Tifrunner.gnm1.ann1.P3YD5X Arachis hypogaea HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
arahy.Tifrunner.gnm1.ann1.Q6J55I Arachis hypogaea HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Cfa009859 Carpinus fangiana HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Ciclev10017928m.g Citrus clementina HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
COL.COLO4_32772 Corchorus olitorius HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Dinv15035 Davidia involucrata HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Migut.D00665 Erythranthe guttata HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Migut.N02374 Erythranthe guttata HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Hma1.2p1_0859F.1_g229470 Hydrangea macrophylla HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
MBI13_g12111_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Manes.02G138900 Manihot esculenta HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
Hund07435 Selenicereus undatus HOM05D001657 ORTHO05D001557 1.7e-06 57.0 96 45.8
vmacro14145 Vaccinium macrocarpon HOM05D002213 ORTHO05D002297 1.7e-06 57.0 125 31.2
CiPaw.13G150300 Carya illinoinensis HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Ca_06195_v3 Cicer arietinum L. HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Dinv36162 Davidia involucrata HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Medtr5g089490 Medicago truncatula HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Oeu025906.2 Olea europaea HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Os07g0658300 Oryza sativa ssp. japonica HOM05D001657 ORTHO05D001557 2.2e-06 56.6 104 43.3
Psat0ss3759g0080 Pisum sativum HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
Sc09g0001020 Simmondsia chinensis HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 44.8
TPR.G15861 Trifolium pratense HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
VMungo0647G0415 Vigna mungo HOM05D001657 ORTHO05D001557 2.2e-06 56.6 96 45.8
ClCG07G015830 Citrullus lanatus HOM05D002213 ORTHO05D002297 2.8e-06 56.2 124 34.7
Duzib177G0706 Durio zibethinus HOM05D002213 ORTHO05D002297 2.8e-06 56.2 124 34.7
Gohir.A05G073000 Gossypium hirsutum HOM05D001657 ORTHO05D001557 2.8e-06 56.2 96 44.8
CAN.G64.13 Capsicum annuum HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
Lalb_Chr17g0347881 Lupinus albus HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
Oeu061708.1 Olea europaea HOM05D001657 ORTHO05D001557 3.7e-06 55.8 86 44.2
Os03g0356638 Oryza sativa ssp. japonica HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
Rhsim07G0121200 Rhododendron simsii HOM05D002213 ORTHO05D002297 3.7e-06 55.8 125 31.2
Solyc01g008770.3 Solanum lycopersicum HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
Sopen01g004280 Solanum pennellii HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
HPP92_013980 Vanilla planifolia HOM05D001657 ORTHO05D001557 3.7e-06 55.8 104 42.3
Zm00001eb017310 Zea mays HOM05D001657 ORTHO05D001557 3.7e-06 55.8 96 44.8
MELO3C017698.2 Cucumis melo HOM05D002213 ORTHO05D002297 4.9e-06 55.5 124 33.1
CsaV3_4G003550 Cucumis sativus L. HOM05D002213 ORTHO05D002297 4.9e-06 55.5 124 33.1
Lalb_Chr10g0106231 Lupinus albus HOM05D001657 ORTHO05D001557 4.9e-06 55.5 96 44.8
Oeu034488.1 Olea europaea HOM05D002213 ORTHO05D002297 4.9e-06 55.5 123 34.1
Potri.009G069700 Populus trichocarpa HOM05D001657 ORTHO05D001557 4.9e-06 55.5 96 44.8
Thecc.09G247900 Theobroma cacao HOM05D001657 ORTHO05D001557 4.9e-06 55.5 95 45.3
VMungo0647G2572 Vigna mungo HOM05D002213 ORTHO05D002297 4.9e-06 55.5 124 34.7
BcaC09g47731 Brassica carinata HOM05D002213 ORTHO05D002297 6.3e-06 55.1 127 33.1
Gohir.A13G218700 Gossypium hirsutum HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
Gohir.D13G222400 Gossypium hirsutum HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
Gorai.013G253500 Gossypium raimondii HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
Manes.02G139000 Manihot esculenta HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 43.8
Nitab4.5_0000718g0330 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
Nitab4.5_0000730g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
Nitab4.5_0003488g0070 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.3e-06 55.1 96 44.8
SGA_v2.0_scaffold6G03418 Striga asiatica HOM05D002213 ORTHO05D002297 6.3e-06 55.1 127 33.1
Zm00001eb400510 Zea mays HOM05D002213 ORTHO05D002297 6.3e-06 55.1 123 33.3
Aqoxy2G00389 Aquilegia oxysepala HOM05D001657 ORTHO05D001557 8.3e-06 54.7 104 41.3
MSTRG.18463 Avicennia marina HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
MSTRG.20945 Avicennia marina HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 34.7
EL10Ac4g10116 Beta vulgaris HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
CSS0024506 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
CDE08G1603 Ceratophyllum demersum HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 43.8
AUR62000195 Chenopodium quinoa HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
AUR62006545 Chenopodium quinoa HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
Haze_00716 Corylus avellana HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 34.7
Glyma.02G279300 Glycine max HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
Glyma.14G035400 Glycine max HOM05D001657 ORTHO05D001557 8.3e-06 54.7 104 42.3
Gohir.A13G122100 Gossypium hirsutum HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 33.9
Gohir.D13G125900 Gossypium hirsutum HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 33.9
Gorai.013G141000 Gossypium raimondii HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 33.9
LjContig00564g0014509 Lotus japonicus HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
MBI04_g03339_MAGBIO Magnolia biondii HOM05D002213 ORTHO05D002297 8.3e-06 54.7 123 35.0
Nitab4.5_0001500g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
Os10g0337600 Oryza sativa ssp. japonica HOM05D002213 ORTHO05D002297 8.3e-06 54.7 123 31.7
Peaxi162Scf00004g04522 Petunia axillaris HOM05D001657 ORTHO05D001557 8.3e-06 54.7 96 44.8
SGA_v2.0_scaffold42G16125 Striga asiatica HOM05D002213 ORTHO05D002297 8.3e-06 54.7 124 33.1


User provided reference genes

Program Settings