Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.1e-281 972.6 466 100.0
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 4.5e-240 834.3 453 88.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 8.5e-239 830.1 467 85.2
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.3e-235 818.1 469 85.3
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.3e-219 765.0 469 78.5
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.7e-218 762.7 467 77.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.1e-217 758.4 466 77.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.7e-215 752.7 466 77.0
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 5.2e-212 741.1 468 75.4
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.6e-205 719.5 435 78.4
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.4e-185 653.3 455 67.9
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 3.0e-183 645.6 455 67.0
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 5.6e-182 641.3 421 70.1
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 6.2e-181 637.9 440 69.3
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.4e-180 636.7 461 63.6
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 3.1e-180 635.6 452 66.6
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 4.0e-180 635.2 456 65.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 5.2e-180 634.8 457 67.2
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.4e-179 632.1 432 68.3
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 5.8e-179 631.3 434 69.4
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.3e-178 630.2 457 66.5
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 8.3e-178 627.5 422 69.0
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.4e-177 626.7 440 67.0
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 3.2e-177 625.5 424 70.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.1e-177 625.2 423 69.5
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 9.2e-177 624.0 446 67.0
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.2e-176 623.6 424 68.2
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 6.0e-176 621.3 429 67.4
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 6.0e-176 621.3 441 67.1
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.7e-175 619.8 459 64.5
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 2.3e-175 619.4 426 67.6
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.5e-174 616.7 445 65.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 7.3e-174 614.4 457 64.3
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 7.3e-174 614.4 451 65.2
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.2e-173 613.6 444 64.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.8e-173 612.5 425 67.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 4.0e-172 608.6 413 68.5
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.0e-171 606.3 452 65.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 2.6e-171 605.9 415 68.0
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 3.4e-171 605.5 450 63.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.4e-171 605.1 420 65.7
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.4e-171 605.1 420 66.0
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 9.9e-171 604.0 425 66.1
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 2.9e-170 602.4 396 70.7
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.7e-170 602.1 437 63.8
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 4.1e-169 598.6 488 60.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 8.6e-167 590.9 422 64.5
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.1e-166 590.5 416 66.3
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.9e-166 589.7 425 65.2
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.9e-166 589.7 424 65.3
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.9e-166 589.7 357 78.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.5e-166 589.3 451 62.7
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 3.3e-166 589.0 432 63.2
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.4e-164 583.6 398 69.1
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 2.4e-164 582.8 421 63.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.6e-163 579.3 451 60.8
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.8e-163 578.2 439 63.3
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.7e-162 576.6 423 63.8
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.2e-162 576.2 422 64.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-162 576.2 422 64.2
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.8e-162 575.5 401 66.3
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 4.9e-162 575.1 441 61.7
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 8.4e-162 574.3 411 64.7
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 7.1e-161 571.2 422 64.0
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.0e-160 568.2 422 64.0
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.9e-159 565.5 424 64.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 6.6e-159 564.7 415 63.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.9e-158 563.1 407 64.6
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 4.0e-156 555.4 443 61.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 6.0e-152 541.6 427 61.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-151 540.8 400 65.2
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 6.6e-151 538.1 431 61.0
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.1e-150 537.3 437 58.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 3.6e-149 532.3 456 56.4
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 5.8e-147 525.0 407 62.7
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 6.7e-143 511.5 420 57.6
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.4e-140 503.8 437 56.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 6.9e-140 501.5 441 56.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 2.6e-139 499.6 421 58.2
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.6e-139 499.6 433 58.7
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.8e-139 498.4 390 59.5
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.4e-137 493.8 428 57.0
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.4e-137 493.8 326 68.1
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.6e-136 490.3 434 54.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 5.7e-134 481.9 355 67.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.1e-132 477.6 335 66.9
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 3.8e-130 469.2 334 66.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.6e-128 462.2 408 59.1
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.9e-128 461.5 413 57.9
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-126 457.2 384 60.7
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.7e-122 443.7 335 63.3
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.9e-122 443.0 419 51.8
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 5.1e-119 432.2 335 62.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.2e-99 367.9 226 73.9
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 9.1e-92 341.7 225 68.9
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-89 334.3 247 69.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.7e-77 294.3 236 61.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.6e-75 287.7 197 67.0
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 6.4e-61 239.2 384 36.7
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.6e-54 215.7 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.6e-54 215.7 130 78.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 6.6e-50 202.6 180 55.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 5.4e-44 183.0 363 33.1
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.4e-36 158.3 172 48.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 3.3e-33 147.1 128 53.1
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.8e-32 143.3 171 48.5
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.8e-32 143.3 171 48.5
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.6e-27 128.3 70 87.1
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.0e-26 125.6 94 60.6
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.1e-20 105.5 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.5e-20 103.2 75 65.3
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 2.6e-14 84.3 209 32.1
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 4.2e-12 77.0 199 30.7
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.2e-11 75.5 203 30.0
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.6e-11 75.1 385 20.0
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.1e-11 73.2 75 46.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 9.0e-07 59.3 77 40.3


User provided reference genes

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