Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06048_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 3.6e-75 285.0 166 100.0
Ca_09552_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.9e-63 246.1 151 96.7
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 5.6e-52 208.0 119 92.4
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.3e-51 206.8 133 84.2
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 1.2e-49 200.3 131 82.4
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 9.9e-41 170.6 117 80.3
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.3e-37 160.2 118 81.4
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.9e-36 156.4 117 79.5
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 7.4e-36 154.5 115 80.0
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 9.6e-36 154.1 117 77.8
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.1e-34 150.6 115 78.3
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.4e-31 140.2 120 69.2
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.6e-30 136.7 120 71.7
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 2.6e-25 119.4 119 63.0
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.5e-25 118.6 119 59.7
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 7.6e-25 117.9 118 59.3
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.3e-24 117.1 119 58.8
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 3.8e-24 115.5 117 59.8
Lalb_Chr18g0048681 Lupinus albus HOM05D003079 ORTHO05D003461 5.0e-24 115.2 115 65.2
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.1e-23 114.0 117 62.4
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 9.3e-23 110.9 119 58.0
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 1.6e-22 110.2 119 59.7
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 2.7e-22 109.4 120 58.3
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 2.7e-22 109.4 120 56.7
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 6.1e-22 108.2 118 58.5
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 1.0e-21 107.5 119 56.3
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 1.3e-21 107.1 119 54.6
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 2.3e-21 106.3 125 53.6
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.3e-21 106.3 119 56.3
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 3.9e-21 105.5 119 59.7
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 5.1e-21 105.1 119 58.8
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.1e-20 104.0 114 52.6
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.9e-20 103.2 119 58.0
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.9e-20 103.2 119 58.0
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.9e-20 103.2 119 58.0
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 7.4e-20 101.3 121 57.0
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 9.7e-20 100.9 119 52.1
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 9.7e-20 100.9 119 56.3
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 3.7e-19 99.0 119 51.3
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 4.8e-19 98.6 120 52.5
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 4.8e-19 98.6 121 52.9
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 8.2e-19 97.8 119 52.9
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 1.1e-18 97.4 119 52.9
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 1.4e-18 97.1 125 49.6
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 5.3e-18 95.1 125 49.6
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 9.0e-18 94.4 53 92.5
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.5e-17 93.6 125 49.6
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.5e-17 93.6 119 51.3
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.4e-17 92.4 121 49.6
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 3.4e-17 92.4 119 51.3
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 5.9e-17 91.7 115 54.8
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.3e-16 90.5 121 49.6
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.3e-16 90.5 121 49.6
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 1.3e-16 90.5 126 47.6
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.7e-16 90.1 115 53.9
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.7e-16 90.1 115 53.9
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.7e-16 90.1 122 54.9
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.2e-16 89.7 121 53.7
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.1e-15 87.4 120 49.2
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.1e-15 87.4 119 51.3
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 3.2e-15 85.9 125 47.2
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 7.2e-15 84.7 120 47.5
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 3.6e-14 82.4 115 49.6
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 4.6e-14 82.0 120 52.5
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 6.1e-14 81.6 120 49.2
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 6.1e-14 81.6 120 49.2
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 6.1e-14 81.6 116 49.1
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 7.9e-14 81.3 120 49.2
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 7.9e-14 81.3 112 48.2
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 1.0e-13 80.9 127 50.4
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.8e-13 80.1 118 43.2
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 2.3e-13 79.7 118 48.3
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 3.9e-13 79.0 117 47.0
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.1e-13 78.6 119 48.7
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 8.8e-13 77.8 128 47.7
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 2.0e-12 76.6 115 47.8
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 2.0e-12 76.6 130 45.4
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.5e-12 76.3 115 50.4
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 2.5e-12 76.3 116 50.0
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 3.3e-12 75.9 116 46.6
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 3.3e-12 75.9 121 46.3
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 4.3e-12 75.5 129 44.2
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 5.7e-12 75.1 116 46.6
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 5.7e-12 75.1 117 46.2
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.7e-12 75.1 120 48.3
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 7.4e-12 74.7 118 49.2
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 7.4e-12 74.7 114 47.4
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 7.4e-12 74.7 118 45.8
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 9.7e-12 74.3 115 48.7
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.3e-11 73.9 120 46.7
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.3e-11 73.9 122 48.4
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.7e-11 73.6 116 45.7
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.7e-11 73.6 122 45.9
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.7e-11 72.4 119 45.4
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.1e-10 70.9 122 44.3
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.1e-10 70.9 117 44.4
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.1e-10 70.9 122 44.3
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.4e-10 70.5 116 44.8
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.3e-10 68.6 126 43.7
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 6.9e-10 68.2 113 45.1
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 1.2e-09 67.4 118 46.6
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 3.4e-09 65.9 114 45.6
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.9e-09 65.1 119 43.7
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 2.2e-08 63.2 119 43.7
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 2.9e-08 62.8 136 36.8
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 5.0e-08 62.0 111 42.3
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 5.0e-08 62.0 111 42.3
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.0e-08 62.0 126 41.3
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 6.5e-08 61.6 127 38.6
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 8.5e-08 61.2 111 38.7
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 8.5e-08 61.2 55 70.9
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.1e-07 60.8 117 41.0
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 1.4e-07 60.5 113 37.2
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 1.9e-07 60.1 118 43.2
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 1.9e-07 60.1 110 40.9
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 2.5e-07 59.7 117 41.0
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 5.5e-07 58.5 105 43.8
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 5.5e-07 58.5 117 38.5
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 5.5e-07 58.5 114 39.5
ATR0751G003 Amborella trichopoda HOM05D003079 ORTHO05D003461 9.4e-07 57.8 116 42.2
Ca_14137_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 9.4e-07 57.8 31 90.3
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 9.4e-07 57.8 122 41.8
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 1.6e-06 57.0 113 38.1
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 2.7e-06 56.2 115 37.4
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 7.9e-06 54.7 110 40.9


User provided reference genes

Program Settings