Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 0.0e+00 1218.8 626 100.0
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 1.0e-300 1036.2 630 84.8
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 3.4e-299 1031.2 628 83.9
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 8.3e-298 1026.5 629 84.6
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.3e-263 912.9 627 77.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 4.9e-258 894.4 628 74.7
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 5.8e-251 870.9 626 72.4
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.5e-243 846.3 637 68.4
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 4.5e-243 844.7 623 71.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.9e-242 842.0 643 70.9
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.9e-241 839.3 643 70.8
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-217 760.0 492 80.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.2e-200 703.7 616 59.4
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 2.1e-200 703.0 575 63.1
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 8.8e-199 697.6 622 62.9
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 5.7e-198 694.9 651 59.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.8e-196 689.9 623 58.6
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.7e-195 686.0 618 60.4
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 7.7e-195 684.5 634 57.7
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 7.7e-195 684.5 619 59.1
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.3e-194 683.7 624 58.3
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.2e-194 682.9 608 59.0
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 8.5e-194 681.0 625 57.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 8.5e-194 681.0 634 57.9
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.5e-194 681.0 621 58.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.5e-193 679.5 621 58.0
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.5e-193 679.5 631 60.1
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.2e-193 679.1 633 60.3
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 5.5e-193 678.3 616 59.3
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.2e-192 677.2 575 62.1
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.2e-192 677.2 619 59.8
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 1.2e-192 677.2 618 60.7
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 5.7e-190 668.3 618 62.3
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 7.5e-190 667.9 615 57.1
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 9.8e-190 667.5 617 61.1
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 2.2e-189 666.4 566 62.0
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 2.8e-189 666.0 555 59.8
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 8.3e-189 664.5 620 59.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.1e-188 664.1 559 59.9
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.4e-188 662.9 599 59.1
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 9.1e-188 661.0 635 56.5
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.2e-187 660.6 558 62.9
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 4.5e-187 658.7 573 59.7
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 5.9e-187 658.3 619 56.7
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 7.7e-187 657.9 548 61.3
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 1.0e-186 657.5 569 61.0
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.7e-186 656.8 599 58.4
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 3.8e-186 655.6 633 57.0
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.1e-185 654.1 572 60.1
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.5e-185 653.7 637 55.7
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.9e-185 653.3 636 55.3
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 5.5e-185 651.7 616 55.7
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.7e-184 649.4 560 64.3
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.6e-184 649.0 569 59.6
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.4e-183 647.1 633 55.3
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.4e-183 647.1 633 55.3
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.3e-183 646.4 624 55.4
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 6.8e-183 644.8 625 56.6
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 8.8e-183 644.4 614 58.8
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.5e-182 643.7 561 61.7
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 4.4e-182 642.1 625 59.0
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 5.7e-182 641.7 631 56.6
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.7e-182 641.7 628 54.5
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.8e-182 641.0 629 55.2
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 2.2e-181 639.8 630 54.9
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 6.3e-181 638.3 624 58.5
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.4e-180 637.1 630 54.3
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.8e-180 636.7 630 57.6
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 2.4e-180 636.3 534 63.9
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 4.1e-180 635.6 637 53.5
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.2e-179 634.0 613 54.2
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.6e-179 633.6 577 57.7
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 2.0e-179 633.3 560 59.8
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 3.5e-179 632.5 558 61.5
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.7e-178 630.2 620 57.1
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 8.6e-178 627.9 611 54.2
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.9e-177 626.7 568 60.6
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 2.5e-177 626.3 564 59.2
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 7.3e-177 624.8 551 59.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.6e-176 623.6 616 57.1
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.6e-176 623.6 615 56.1
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.3e-175 619.8 557 57.3
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.3e-175 619.8 616 57.1
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 1.7e-173 613.6 557 56.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 8.3e-173 611.3 549 59.4
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 5.0e-170 602.1 550 57.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 6.8e-167 591.7 629 55.8
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.3e-165 587.4 612 52.6
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 7.3e-161 571.6 499 59.7
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 8.9e-159 564.7 576 51.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.9e-157 558.9 418 64.4
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.1e-156 555.8 583 51.3
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 9.2e-156 554.7 619 52.8
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 4.4e-150 535.8 607 48.8
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 7.6e-142 508.4 551 52.3
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 2.9e-141 506.5 342 68.1
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 8.4e-133 478.4 582 47.6
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 7.9e-131 471.9 554 46.0
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 2.6e-126 456.8 352 71.0
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 7.6e-126 455.3 556 46.4
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.2e-117 427.2 432 57.2
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.5e-105 387.9 361 58.7
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.4e-71 275.0 547 32.0
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.5e-46 190.7 267 38.2
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.0e-45 187.6 277 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 3.9e-45 187.2 266 39.5
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 2.0e-41 174.9 240 35.0
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.2e-40 171.4 562 31.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.4e-31 140.2 99 64.6
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 5.4e-31 140.2 80 81.2
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 7.1e-31 139.8 86 77.9
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.1e-29 133.7 90 66.7
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.9e-24 117.9 83 68.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-23 115.5 69 73.9
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.1e-19 101.7 69 65.2
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 1.3e-16 92.4 232 25.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 6.4e-16 90.1 100 56.0


User provided reference genes

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