Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 0.0e+00 1439.9 727 100.0
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 0.0e+00 1242.6 727 85.8
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 0.0e+00 1234.2 727 85.4
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 0.0e+00 1233.0 732 85.0
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 0.0e+00 1228.0 728 84.6
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 0.0e+00 1227.2 718 86.1
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 0.0e+00 1226.8 727 85.0
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 0.0e+00 1218.4 726 84.3
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 0.0e+00 1207.2 721 83.6
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 0.0e+00 1185.2 726 82.5
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 0.0e+00 1127.9 727 77.2
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 0.0e+00 1127.5 730 77.0
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 0.0e+00 1125.9 726 75.9
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 0.0e+00 1124.8 731 76.2
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 0.0e+00 1115.9 727 76.5
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 0.0e+00 1102.4 727 76.2
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 0.0e+00 1101.7 730 74.9
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 0.0e+00 1099.3 728 76.0
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 0.0e+00 1095.1 722 74.2
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 0.0e+00 1094.3 723 77.3
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 0.0e+00 1093.6 701 76.7
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 0.0e+00 1091.3 727 75.5
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 0.0e+00 1091.3 727 75.0
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 0.0e+00 1090.1 727 74.3
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 0.0e+00 1078.9 728 73.8
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 0.0e+00 1077.0 727 74.8
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 5.0e-312 1073.9 728 73.1
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 4.5e-311 1070.8 728 72.9
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 2.9e-310 1068.1 728 72.7
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 8.4e-310 1066.6 839 66.0
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 8.4e-310 1066.6 728 72.4
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 4.2e-309 1064.3 727 76.1
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 3.0e-307 1058.1 727 72.4
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 5.1e-307 1057.4 727 73.9
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 4.8e-305 1050.8 727 72.4
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 4.0e-304 1047.7 796 68.1
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 9.0e-304 1046.6 731 70.9
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 1.1e-301 1039.6 728 71.8
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 2.7e-300 1035.0 738 71.3
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 2.8e-297 1025.0 728 70.6
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 3.8e-294 1014.6 725 70.9
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 1.2e-292 1009.6 725 70.1
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 3.5e-292 1008.1 727 69.5
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 1.9e-290 1002.3 727 69.1
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 5.6e-290 1000.7 725 67.9
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 4.8e-289 997.7 728 68.1
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 2.0e-287 992.3 724 67.3
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 7.6e-287 990.3 724 67.0
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 2.2e-286 988.8 723 67.8
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 2.9e-286 988.4 731 68.8
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 1.9e-285 985.7 730 68.2
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 2.5e-285 985.3 727 66.7
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 4.2e-285 984.6 727 66.0
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 5.5e-285 984.2 716 67.6
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 1.6e-284 982.6 623 77.8
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 2.3e-283 978.8 734 68.1
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 3.7e-281 971.5 699 68.2
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 2.2e-278 962.2 727 67.8
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 6.5e-278 960.7 728 64.6
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 2.1e-276 955.7 733 65.2
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 7.9e-276 953.7 727 66.9
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 1.8e-275 952.6 729 66.4
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 5.1e-275 951.0 732 66.1
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 9.1e-272 940.3 728 65.4
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 5.1e-267 924.5 725 62.5
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 4.4e-266 921.4 726 62.9
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 9.1e-264 913.7 726 62.5
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 7.7e-263 910.6 727 62.4
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 1.7e-262 909.4 726 62.0
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 5.0e-262 907.9 726 62.0
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 6.5e-262 907.5 726 62.0
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 8.5e-262 907.1 650 70.2
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 1.4e-261 906.4 726 61.8
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 2.5e-261 905.6 724 61.6
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 2.5e-261 905.6 725 61.7
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 2.5e-261 905.6 725 61.7
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 2.5e-261 905.6 725 61.7
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 9.1e-248 860.5 665 66.9
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 2.0e-242 842.8 724 60.2
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 2.2e-241 839.3 730 59.7
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 3.7e-241 838.6 730 59.7
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 2.8e-212 742.7 590 64.2
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 1.2e-210 737.3 481 73.8
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 4.7e-204 715.3 736 52.3
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 1.3e-190 670.6 672 55.2
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 3.1e-187 659.4 681 52.4
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 1.3e-185 654.1 471 70.3
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 4.2e-184 649.0 668 52.2
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 2.5e-181 639.8 439 75.4
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 7.4e-181 638.3 681 50.5
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.3e-177 627.5 599 55.3
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 1.7e-177 627.1 672 50.1
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 5.0e-153 545.8 432 61.1
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 2.5e-152 543.5 669 45.3
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 1.3e-148 531.2 430 63.7
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 4.8e-148 529.3 378 69.8
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.3e-145 521.2 508 55.7
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 3.4e-133 479.9 393 60.1
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.4e-126 458.0 484 51.7
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 4.4e-125 453.0 663 39.5
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 4.1e-123 446.4 425 57.4
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 3.4e-117 426.8 337 64.7
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 2.2e-116 424.1 302 67.2
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 2.9e-113 413.7 327 68.2
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 4.0e-110 403.3 312 65.7
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 2.3e-105 387.5 297 64.3
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.9e-99 367.9 587 39.0
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 1.1e-96 358.6 228 77.6
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 2.8e-95 354.0 268 65.3
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 1.6e-82 311.6 238 65.1
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 8.7e-73 279.3 221 61.5
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 4.8e-55 220.3 153 70.6
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 1.8e-54 218.4 162 68.5
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 2.2e-47 194.9 149 62.4
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 6.5e-44 183.3 138 65.9
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 1.5e-32 145.6 727 26.0
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 3.6e-26 124.4 104 59.6
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.1e-22 112.8 71 77.5
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 4.7e-18 97.4 69 66.7
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 4.5e-13 80.9 74 64.9
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 4.2e-11 74.3 52 65.4
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 9.4e-11 73.2 44 79.5
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 3.7e-07 61.2 664 20.0


User provided reference genes

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