Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05655_v3 Cicer arietinum L. HOM05D000660 ORTHO05D014784 1.2e-92 343.2 182 100.0
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 2.5e-53 212.6 177 67.2
arahy.Tifrunner.gnm1.ann1.AHLX63 Arachis hypogaea HOM05D000660 ORTHO05D003823 1.2e-10 70.9 90 45.6
arahy.Tifrunner.gnm1.ann1.UNJ3ZI Arachis hypogaea HOM05D000660 ORTHO05D003823 1.2e-10 70.9 90 45.6
Prupe.1G122800 Prunus persica HOM05D000660 ORTHO05D003823 1.2e-10 70.9 90 47.8
Oeu029004.1 Olea europaea HOM05D000660 ORTHO05D003823 3.4e-10 69.3 102 46.1
TPR.G16847 Trifolium pratense HOM05D000660 ORTHO05D003823 3.4e-10 69.3 90 45.6
VMungo1215G0416 Vigna mungo HOM05D000660 ORTHO05D003823 4.5e-10 68.9 89 49.4
MD16G1157900 Malus domestica HOM05D000660 ORTHO05D003823 5.8e-10 68.6 123 39.0
Phvul.003G111900 Phaseolus vulgaris HOM05D000660 ORTHO05D003823 5.8e-10 68.6 84 52.4
Glyma.07G242000 Glycine max HOM05D000660 ORTHO05D003823 2.2e-09 66.6 104 44.2
HanXRQChr01g0029901 Helianthus annuus HOM05D000660 ORTHO05D003823 2.2e-09 66.6 90 46.7
MSTRG.10139 Avicennia marina HOM05D000660 ORTHO05D003823 3.8e-09 65.9 90 46.7
Glyma.17G031900 Glycine max HOM05D000660 ORTHO05D003823 3.8e-09 65.9 85 48.2
Psat4g022320 Pisum sativum HOM05D000660 ORTHO05D003823 3.8e-09 65.9 90 45.6
Oeu036983.1 Olea europaea HOM05D000660 ORTHO05D003823 6.4e-09 65.1 90 45.6
Rhsim04G0233600 Rhododendron simsii HOM05D000660 ORTHO05D003823 8.4e-09 64.7 90 44.4
Psat4g022280 Pisum sativum HOM05D000660 ORTHO05D003823 1.4e-08 63.9 93 44.1
PSO210G4000 Papaver somniferum HOM05D000660 ORTHO05D003823 1.9e-08 63.5 89 44.9
PSO761G0659 Papaver somniferum HOM05D000660 ORTHO05D003823 1.9e-08 63.5 89 44.9
PGR004G1371 Punica granatum HOM05D000660 ORTHO05D003823 2.4e-08 63.2 90 45.6
HanXRQChr05g0148191 Helianthus annuus HOM05D000660 ORTHO05D003823 3.2e-08 62.8 102 42.2
Os07g0490200 Oryza sativa ssp. japonica HOM05D000660 ORTHO05D003823 3.2e-08 62.8 114 38.6
Lj6C688T9 Lonicera japonica HOM05D000660 ORTHO05D003823 5.5e-08 62.0 90 43.3
Zm00001eb321680 Zea mays HOM05D000660 ORTHO05D003823 9.3e-08 61.2 127 37.0
Duzib212G0471 Durio zibethinus HOM05D000660 ORTHO05D003823 1.2e-07 60.8 90 43.3
TAR589G0001 Trochodendron aralioides HOM05D000660 ORTHO05D003823 1.6e-07 60.5 111 39.6
ECA246G5148 Erigeron canadensis HOM05D000660 ORTHO05D003823 2.1e-07 60.1 90 42.2
Ca_21455_v3 Cicer arietinum L. HOM05D000660 ORTHO05D003823 2.7e-07 59.7 100 40.0
Gorai.005G065700 Gossypium raimondii HOM05D000660 ORTHO05D003823 2.7e-07 59.7 90 43.3
CSS0035880 Camellia sinensis var. sinensis HOM05D000660 ORTHO05D003823 4.6e-07 58.9 67 50.7
Gohir.D02G058200 Gossypium hirsutum HOM05D000660 ORTHO05D003823 4.6e-07 58.9 90 42.2
Gohir.A02G053500 Gossypium hirsutum HOM05D000660 ORTHO05D003823 6.0e-07 58.5 90 43.3
Sopen01g026290 Solanum pennellii HOM05D000660 ORTHO05D003823 6.0e-07 58.5 111 38.7
MSTRG.21779 Avicennia marina HOM05D000660 ORTHO05D003823 7.9e-07 58.2 111 39.6
TAR633G0684 Trochodendron aralioides HOM05D000660 ORTHO05D003823 7.9e-07 58.2 111 38.7
COL.COLO4_34655 Corchorus olitorius HOM05D000660 ORTHO05D003823 1.0e-06 57.8 90 41.1
Lalb_Chr13g0298381 Lupinus albus HOM05D000660 ORTHO05D003823 1.3e-06 57.4 68 48.5
CARHR092210 Cardamine hirsuta HOM05D000660 ORTHO05D003823 1.8e-06 57.0 106 37.7
Nitab4.5_0001305g0010 Nicotiana tabacum HOM05D000660 ORTHO05D003823 1.8e-06 57.0 111 38.7
Nitab4.5_0003294g0010 Nicotiana tabacum HOM05D000660 ORTHO05D003823 1.8e-06 57.0 111 38.7
Oeu016483.1 Olea europaea HOM05D000660 ORTHO05D003823 2.3e-06 56.6 111 38.7
Glyma.09G038300 Glycine max HOM05D000660 ORTHO05D003823 3.0e-06 56.2 90 38.9
Medtr4g121840 Medicago truncatula HOM05D000660 ORTHO05D003823 3.0e-06 56.2 90 38.9
Peaxi162Scf00065g00120 Petunia axillaris HOM05D000660 ORTHO05D003823 3.0e-06 56.2 111 37.8
CAN.G197.10 Capsicum annuum HOM05D000660 ORTHO05D003823 3.9e-06 55.8 127 37.0
vmacro15192 Vaccinium macrocarpon HOM05D000660 ORTHO05D003823 3.9e-06 55.8 100 41.0
Carub.0003s1669 Capsella rubella HOM05D000660 ORTHO05D003823 6.7e-06 55.1 105 38.1
PGR031G0095 Punica granatum HOM05D000660 ORTHO05D003823 6.7e-06 55.1 112 35.7
Rhsim02G0005500 Rhododendron simsii HOM05D000660 ORTHO05D003823 6.7e-06 55.1 111 38.7
SalBow8G3172 Salvia bowleyana HOM05D000660 ORTHO05D003823 8.7e-06 54.7 111 37.8
SalBow8G5344 Salvia bowleyana HOM05D000660 ORTHO05D003823 8.7e-06 54.7 111 37.8


User provided reference genes

Program Settings