Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.1e-142 510.0 261 100.0
Psat2g057960 Pisum sativum HOM05D003726 ORTHO05D003520 9.4e-78 294.3 251 69.7
TPR.G34575 Trifolium pratense HOM05D003726 ORTHO05D003520 1.1e-75 287.3 231 74.0
Medtr5g071090 Medicago truncatula HOM05D003726 ORTHO05D003520 1.1e-73 280.8 241 67.6
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 5.0e-71 271.9 251 63.3
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 5.7e-59 231.9 282 54.6
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 8.5e-55 218.0 270 53.3
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 3.6e-53 212.6 278 54.0
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.6e-53 212.6 276 52.9
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 3.6e-53 212.6 276 53.6
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 4.3e-38 162.5 291 42.3
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 9.5e-38 161.4 289 40.5
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 2.3e-36 156.8 292 40.4
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 9.8e-35 151.4 244 44.7
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 3.7e-34 149.4 284 39.1
arahy.Tifrunner.gnm1.ann1.8UNH89 Arachis hypogaea HOM05D003726 ORTHO05D003520 8.3e-34 148.3 244 43.4
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 1.2e-32 144.4 284 41.9
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.0e-32 143.7 290 37.9
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.6e-29 134.0 273 39.6
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.3e-26 124.4 299 36.1
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 7.8e-24 115.2 165 45.5
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 3.9e-23 112.8 288 36.1
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 8.1e-21 105.1 271 38.0
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.1e-20 104.8 311 33.1
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 4.0e-20 102.8 289 33.9
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-19 101.3 265 37.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 4.9e-18 95.9 169 42.6
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.7e-15 87.4 300 31.7
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 2.3e-15 87.0 275 32.0
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.1e-15 85.9 277 30.0
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.9e-14 84.0 283 29.0
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.9e-14 84.0 307 30.9
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 2.5e-14 83.6 303 27.7
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 3.3e-14 83.2 168 36.9
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 7.3e-14 82.0 293 32.8
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 2.8e-13 80.1 271 31.7
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 8.1e-13 78.6 291 30.9
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 8.1e-13 78.6 293 30.4
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.0e-12 76.3 251 33.1
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 6.8e-12 75.5 261 34.1
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 6.8e-12 75.5 261 34.1
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 6.8e-12 75.5 251 33.5
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 8.9e-12 75.1 278 29.5
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 8.9e-12 75.1 253 31.2
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.4e-11 73.2 294 30.6
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.8e-11 72.4 296 30.4
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 7.6e-11 72.0 279 31.2
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 9.9e-11 71.6 237 29.5
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.9e-10 70.1 294 29.3
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.9e-10 70.1 306 28.8
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 6.4e-10 68.9 243 31.3
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 8.4e-10 68.6 268 28.0
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.4e-09 67.8 271 31.4
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.4e-09 67.8 250 29.6
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.2e-09 66.6 251 31.9
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 3.2e-09 66.6 271 31.7
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.6e-08 64.3 267 27.0
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 6.0e-08 62.4 239 32.2
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 7.8e-08 62.0 234 34.6
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 1.0e-07 61.6 258 28.3
FAN21G2890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.0e-07 61.6 164 35.4
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.7e-07 60.8 276 26.4
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.7e-07 60.8 286 27.6
HanXRQChr05g0135801 Helianthus annuus HOM05D003726 ORTHO05D003520 2.3e-07 60.5 235 27.7
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 1.5e-06 57.8 276 26.8
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 1.5e-06 57.8 237 27.8
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.5e-06 57.8 171 31.6
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.9e-06 57.4 172 30.8
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 3.3e-06 56.6 220 29.1
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 4.3e-06 56.2 245 26.9


User provided reference genes

Program Settings