Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05595_v3 Cicer arietinum L. HOM05D006922 ORTHO05D008564 4.0e-274 947.6 515 100.0
TPR.G5774 Trifolium pratense HOM05D006922 ORTHO05D008564 7.4e-236 820.5 561 79.3
Medtr5g070310 Medicago truncatula HOM05D006922 ORTHO05D008564 3.4e-233 811.6 559 76.9
Psat2g058840 Pisum sativum HOM05D006922 ORTHO05D008564 5.3e-226 787.7 554 76.7
Glyma.02G226300 Glycine max HOM05D006922 ORTHO05D008564 2.2e-219 765.8 556 72.8
Lalb_Chr17g0345061 Lupinus albus HOM05D006922 ORTHO05D008564 7.0e-218 760.8 554 71.1
Glyma.14G193200 Glycine max HOM05D006922 ORTHO05D008564 4.5e-217 758.1 564 72.5
Phvul.008G261700 Phaseolus vulgaris HOM05D006922 ORTHO05D008564 1.3e-208 729.9 562 70.5
VMungo0647G1020 Vigna mungo HOM05D006922 ORTHO05D008564 1.9e-207 726.1 551 69.3
arahy.Tifrunner.gnm1.ann1.TP1S59 Arachis hypogaea HOM05D006922 ORTHO05D008564 5.2e-205 718.0 567 66.7
arahy.Tifrunner.gnm1.ann1.GN6H4S Arachis hypogaea HOM05D006922 ORTHO05D008564 6.3e-203 711.1 573 64.9
LjContig00155g0013001 Lotus japonicus HOM05D006922 ORTHO05D008564 7.2e-199 697.6 561 70.2
QL01p038111 Quercus lobata HOM05D006922 ORTHO05D008564 1.5e-196 689.9 552 63.9
CiPaw.13G078100 Carya illinoinensis HOM05D006922 ORTHO05D008564 1.6e-193 679.9 568 63.2
Cfa011691 Carpinus fangiana HOM05D006922 ORTHO05D008564 2.0e-193 679.5 553 65.6
Ciclev10028135m.g Citrus clementina HOM05D006922 ORTHO05D008564 4.5e-193 678.3 544 63.1
TWI75G0327 Tripterygium wilfordii HOM05D006922 ORTHO05D008564 5.0e-192 674.9 559 63.7
CSS0043924 Camellia sinensis var. sinensis HOM05D006922 ORTHO05D008564 1.2e-190 670.2 564 62.1
TAR636G2664 Trochodendron aralioides HOM05D006922 ORTHO05D008564 6.1e-190 667.9 513 65.5
Manes.02G119900 Manihot esculenta HOM05D006922 ORTHO05D008564 8.0e-190 667.5 519 66.9
MD11G1075200 Malus domestica HOM05D006922 ORTHO05D008564 6.8e-189 664.5 514 66.9
Haze_24310 Corylus avellana HOM05D006922 ORTHO05D008564 4.4e-188 661.8 624 59.3
Haze_24317 Corylus avellana HOM05D006922 ORTHO05D008564 4.4e-188 661.8 624 59.3
GSVIVG01024745001 Vitis vinifera HOM05D006922 ORTHO05D008564 9.8e-188 660.6 544 63.1
Thecc.09G302300 Theobroma cacao HOM05D006922 ORTHO05D008564 2.2e-187 659.4 514 66.0
Potri.001G251000 Populus trichocarpa HOM05D006922 ORTHO05D008564 2.4e-186 656.0 554 63.7
ClCG02G019570 Citrullus lanatus HOM05D006922 ORTHO05D008564 7.0e-186 654.4 564 63.3
AUR62020125 Chenopodium quinoa HOM05D006922 ORTHO05D008564 9.2e-186 654.1 508 63.2
Gorai.013G260300 Gossypium raimondii HOM05D006922 ORTHO05D008564 1.6e-185 653.3 514 64.0
CsaV3_6G016240 Cucumis sativus L. HOM05D006922 ORTHO05D008564 4.6e-185 651.7 516 64.7
Rhsim13G0069900 Rhododendron simsii HOM05D006922 ORTHO05D008564 4.6e-185 651.7 553 61.7
FvH4_3g38500 Fragaria vesca HOM05D006922 ORTHO05D008564 6.0e-185 651.4 551 63.3
Gohir.A13G224600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 6.0e-185 651.4 514 64.0
vmacro02966 Vaccinium macrocarpon HOM05D006922 ORTHO05D008564 6.0e-185 651.4 527 63.9
PGR102G2313 Punica granatum HOM05D006922 ORTHO05D008564 7.8e-185 651.0 517 64.8
RcHm_v2.0_Chr5g0069361 Rosa chinensis HOM05D006922 ORTHO05D008564 7.8e-185 651.0 543 65.7
Lsat_1_v5_gn_5_171361 Lactuca sativa HOM05D006922 ORTHO05D008564 1.1e-183 647.1 516 64.0
Atru.chr3.4225 Acer truncatum HOM05D006922 ORTHO05D008564 1.9e-183 646.4 518 64.3
Nn2g13696 Nelumbo nucifera HOM05D006922 ORTHO05D008564 3.6e-182 642.1 513 64.1
Actinidia25162 Actinidia chinensis HOM05D006922 ORTHO05D008564 4.7e-182 641.7 517 61.3
Gohir.D13G229600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 8.0e-182 641.0 514 63.2
Sed0026257 Sechium edule HOM05D006922 ORTHO05D008564 1.8e-181 639.8 517 64.2
Eucgr.B02258 Eucalyptus grandis HOM05D006922 ORTHO05D008564 3.1e-181 639.0 552 63.6
FAN25G0993 Fragaria x ananassa HOM05D006922 ORTHO05D008564 3.1e-181 639.0 564 60.6
Sabra16G0152600 Salix brachista HOM05D006922 ORTHO05D008564 5.2e-181 638.3 512 65.2
Duzib170G0653 Durio zibethinus HOM05D006922 ORTHO05D008564 1.7e-179 633.3 555 60.4
HanXRQChr01g0011191 Helianthus annuus HOM05D006922 ORTHO05D008564 2.2e-179 632.9 514 59.9
Cpa.g.sc112.28 Carica papaya HOM05D006922 ORTHO05D008564 8.3e-179 630.9 567 59.3
AUR62001652 Chenopodium quinoa HOM05D006922 ORTHO05D008564 1.1e-178 630.6 521 62.0
Aqoxy4G02590 Aquilegia oxysepala HOM05D006922 ORTHO05D008564 1.6e-177 626.7 557 58.0
PSO384G3055 Papaver somniferum HOM05D006922 ORTHO05D008564 7.8e-177 624.4 522 61.9
CANSAT54G2041 Cannabis sativa HOM05D006922 ORTHO05D008564 2.3e-176 622.9 546 60.6
Cc01_g14160 Coffea canephora HOM05D006922 ORTHO05D008564 2.3e-176 622.9 515 62.7
VMungo1080G0717 Vigna mungo HOM05D006922 ORTHO05D008564 6.6e-176 621.3 478 66.1
ECA248G0600 Erigeron canadensis HOM05D006922 ORTHO05D008564 1.5e-175 620.2 513 59.8
PSO339G4985 Papaver somniferum HOM05D006922 ORTHO05D008564 2.1e-174 616.3 520 61.0
Migut.N00796 Erythranthe guttata HOM05D006922 ORTHO05D008564 1.5e-172 610.1 561 60.2
Nitab4.5_0006472g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 2.6e-172 609.4 515 60.2
MSTRG.17876 Avicennia marina HOM05D006922 ORTHO05D008564 2.9e-171 605.9 561 56.5
Hund18850 Selenicereus undatus HOM05D006922 ORTHO05D008564 3.7e-171 605.5 515 58.3
SGA_v2.0_scaffold146G36139 Striga asiatica HOM05D006922 ORTHO05D008564 4.9e-171 605.1 514 60.3
Dinv14441 Davidia involucrata HOM05D006922 ORTHO05D008564 1.9e-170 603.2 532 60.0
Ah.08g221140 Amaranthus hybridus HOM05D006922 ORTHO05D008564 2.7e-169 599.4 520 59.8
THA.LOC104814912 Tarenaya hassleriana HOM05D006922 ORTHO05D008564 2.7e-169 599.4 551 59.5
Sopen09g014130 Solanum pennellii HOM05D006922 ORTHO05D008564 2.3e-168 596.3 549 57.2
Solyc09g031610.4 Solanum lycopersicum HOM05D006922 ORTHO05D008564 1.1e-167 594.0 549 56.1
ATR0618G165 Amborella trichopoda HOM05D006922 ORTHO05D008564 2.1e-166 589.7 458 62.4
FAN21G2294 Fragaria x ananassa HOM05D006922 ORTHO05D008564 4.7e-166 588.6 568 57.9
EL10Ac7g16162 Beta vulgaris HOM05D006922 ORTHO05D008564 1.8e-165 586.6 542 56.1
Sc12g0000700 Simmondsia chinensis HOM05D006922 ORTHO05D008564 1.2e-164 583.9 429 64.3
Oeu056142.1 Olea europaea HOM05D006922 ORTHO05D008564 1.4e-162 577.0 486 61.9
Nitab4.5_0021689g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 1.9e-162 576.6 609 51.9
Carub.0008s1938 Capsella rubella HOM05D006922 ORTHO05D008564 2.4e-162 576.2 494 61.9
CDE04G0365 Ceratophyllum demersum HOM05D006922 ORTHO05D008564 3.9e-160 568.9 443 60.3
DCAR_007371 Daucus carota HOM05D006922 ORTHO05D008564 4.7e-158 562.0 445 61.8
MELO3C025853.2 Cucumis melo HOM05D006922 ORTHO05D008564 9.0e-157 557.8 458 64.6
Os01g0141700 Oryza sativa ssp. japonica HOM05D006922 ORTHO05D008564 3.4e-156 555.8 441 60.1
Aa31LG11G520 Aethionema arabicum HOM05D006922 ORTHO05D008564 1.4e-154 550.4 447 60.0
Lj2A1081T41 Lonicera japonica HOM05D006922 ORTHO05D008564 1.4e-154 550.4 496 60.1
Sp6g20450 Schrenkiella parvula HOM05D006922 ORTHO05D008564 3.2e-154 549.3 547 54.3
Peaxi162Scf00116g00214 Petunia axillaris HOM05D006922 ORTHO05D008564 1.3e-152 543.9 533 55.0
Thhalv10013126m.g Eutrema salsugineum HOM05D006922 ORTHO05D008564 1.7e-152 543.5 509 57.4
HPP92_019886 Vanilla planifolia HOM05D006922 ORTHO05D008564 5.1e-152 542.0 476 55.7
AL8G35040 Arabidopsis lyrata HOM05D006922 ORTHO05D008564 8.1e-150 534.6 495 58.2
CARHR272670 Cardamine hirsuta HOM05D006922 ORTHO05D008564 5.3e-149 531.9 506 57.5
C02p13110 Brassica napus HOM05D006922 ORTHO05D008564 2.0e-148 530.0 494 57.9
BolC2t07428H Brassica oleracea HOM05D006922 ORTHO05D008564 2.0e-148 530.0 494 57.9
A02p07550 Brassica napus HOM05D006922 ORTHO05D008564 1.3e-147 527.3 482 59.1
AT5G58760 Arabidopsis thaliana HOM05D006922 ORTHO05D008564 1.7e-147 526.9 497 57.1
BcaC03g14075 Brassica carinata HOM05D006922 ORTHO05D008564 6.4e-147 525.0 433 60.5
FAN11G1737 Fragaria x ananassa HOM05D006922 ORTHO05D008564 1.9e-146 523.5 362 69.6
BraA02t05832Z Brassica rapa HOM05D006922 ORTHO05D008564 2.4e-146 523.1 482 58.7
BcaB05g22449 Brassica carinata HOM05D006922 ORTHO05D008564 7.1e-146 521.5 434 60.1
Zm00001eb335650 Zea mays HOM05D006922 ORTHO05D008564 7.9e-145 518.1 440 61.1
SHI19141 Sapria himalayana HOM05D006922 ORTHO05D008564 5.6e-143 511.9 555 49.5
Prupe.6G058000 Prunus persica HOM05D006922 ORTHO05D008564 6.4e-139 498.4 552 51.6
AagrBONN_evm.TU.Sc2ySwM_344.796 Anthoceros agrestis HOM05D006922 ORTHO05D008564 4.6e-137 492.3 443 56.2
unitig_0.g440 Utricularia gibba HOM05D006922 ORTHO05D008564 1.3e-131 474.2 517 51.8
SMO200G0225 Selaginella moellendorffii HOM05D006922 ORTHO05D008564 1.1e-127 461.1 441 50.3
CBR_g22343 Chara braunii HOM05D006922 ORTHO05D008564 8.2e-126 454.9 454 50.9
Pp3c8_16660 Physcomitrium patens HOM05D006922 ORTHO05D008564 2.2e-118 430.3 437 47.8
HPP92_019877 Vanilla planifolia HOM05D006922 ORTHO05D008564 1.4e-104 384.4 410 50.2
FAN16G0983 Fragaria x ananassa HOM05D006922 ORTHO05D008564 4.7e-89 332.8 253 65.6
COL.COLO4_19151 Corchorus olitorius HOM05D006922 ORTHO05D008564 8.6e-59 232.3 281 46.3
FAN21G0821 Fragaria x ananassa HOM05D006922 ORTHO05D008564 3.3e-42 177.2 101 76.2
Cre13.g577550 Chlamydomonas reinhardtii HOM05D006922 ORTHO05D008564 1.8e-40 171.4 439 28.2
Hma1.2p1_0227F.1_g096470 Hydrangea macrophylla HOM05D006922 ORTHO05D008564 9.9e-39 165.6 162 52.5
CAN.G3.37 Capsicum annuum HOM05D006922 ORTHO05D008564 9.6e-34 149.1 222 41.4
SEGI_07058 Sequoiadendron giganteum HOM05D006922 ORTHO05D008564 1.6e-33 148.3 100 60.0
PGSC0003DMG400022078 Solanum tuberosum HOM05D006922 ORTHO05D008564 1.8e-32 144.8 99 72.7
Zm00001eb098530 Zea mays HOM05D008428 ORTHO05D010743 1.7e-30 138.3 90 72.2
Zm00001eb204440 Zea mays HOM05D008428 ORTHO05D010743 2.2e-30 137.9 90 71.1
Actinidia23246 Actinidia chinensis HOM05D006922 ORTHO05D008564 4.9e-30 136.7 124 54.0
Zm00001eb302770 Zea mays HOM05D008428 ORTHO05D010743 1.9e-29 134.8 90 70.0
Actinidia25165 Actinidia chinensis HOM05D006922 ORTHO05D008564 3.7e-25 120.6 93 60.2
Actinidia16091 Actinidia chinensis HOM05D006922 ORTHO05D008564 7.6e-23 112.8 61 82.0
CDE02G4620 Ceratophyllum demersum HOM05D006922 ORTHO05D008564 4.2e-13 80.5 194 32.0
Actinidia14201 Actinidia chinensis HOM05D000103 ORTHO05D000049 7.4e-10 69.7 74 47.3
MD15G1157400 Malus domestica HOM05D004232 ORTHO05D004909 6.3e-09 66.6 302 21.5
COL.COLO4_17524 Corchorus olitorius HOM05D004232 ORTHO05D004909 1.2e-07 62.4 211 23.2
Actinidia16090 Actinidia chinensis HOM05D006922 ORTHO05D008564 4.5e-07 60.5 94 37.2
Actinidia14207 Actinidia chinensis HOM05D000103 ORTHO05D008564 5.9e-07 60.1 41 61.0
Lsat_1_v5_gn_3_57841 Lactuca sativa HOM05D003404 ORTHO05D004052 1.0e-06 59.3 41 61.0
Cfa025051 Carpinus fangiana HOM05D004232 ORTHO05D004909 2.9e-06 57.8 152 30.9
Aqoxy7G03502 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 5.0e-06 57.0 303 19.8
Atru.chr7.187 Acer truncatum HOM05D004232 ORTHO05D004909 6.5e-06 56.6 309 21.7
Nitab4.5_0011109g0010 Nicotiana tabacum HOM05D004232 ORTHO05D004909 6.5e-06 56.6 179 25.7


User provided reference genes

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