Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05589_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 2.2e-39 165.2 86 100.0
Psat2g059240 Pisum sativum HOM05D005811 ORTHO05D007070 3.5e-29 131.3 95 78.9
Phvul.006G065100 Phaseolus vulgaris HOM05D005811 ORTHO05D007070 5.9e-29 130.6 93 78.5
VMungo0540G1301 Vigna mungo HOM05D005811 ORTHO05D007070 2.2e-28 128.6 91 79.1
Glyma.18G065900 Glycine max HOM05D005811 ORTHO05D007070 8.5e-28 126.7 94 76.6
CiPaw.13G080400 Carya illinoinensis HOM05D005811 ORTHO05D007070 2.5e-27 125.2 91 75.8
Cfa011662 Carpinus fangiana HOM05D005811 ORTHO05D007070 3.6e-26 121.3 93 76.3
Nn2g11406 Nelumbo nucifera HOM05D005811 ORTHO05D007070 3.0e-25 118.2 92 75.0
Cpa.g.sc112.49 Carica papaya HOM05D005811 ORTHO05D007070 1.2e-24 116.3 92 70.7
Nn2g13640 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.5e-24 115.9 90 74.4
TAR369G0215 Trochodendron aralioides HOM05D005811 ORTHO05D007070 2.6e-24 115.2 92 69.6
Lj6g0027141 Lotus japonicus HOM05D005811 ORTHO05D007070 4.4e-24 114.4 93 74.2
Prupe.6G060300 Prunus persica HOM05D005811 ORTHO05D007070 4.4e-24 114.4 92 69.6
PGR102G1689 Punica granatum HOM05D005811 ORTHO05D007070 4.4e-24 114.4 91 73.6
TPR.G13272 Trifolium pratense HOM05D005811 ORTHO05D007070 4.4e-24 114.4 98 70.4
Haze_24267 Corylus avellana HOM05D005811 ORTHO05D007070 5.7e-24 114.0 96 75.0
Glyma.11G176000 Glycine max HOM05D005811 ORTHO05D007070 5.7e-24 114.0 94 69.1
Duzib170G0110 Durio zibethinus HOM05D005811 ORTHO05D007070 1.7e-23 112.5 92 70.7
LjContig00155g0018843 Lotus japonicus HOM05D005811 ORTHO05D007070 1.7e-23 112.5 91 73.6
Medtr5g069990 Medicago truncatula HOM05D005811 ORTHO05D007070 1.7e-23 112.5 107 59.8
MBI14_g04429_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 3.7e-23 111.3 91 72.5
Duzib150G1392 Durio zibethinus HOM05D005811 ORTHO05D007070 4.8e-23 110.9 93 72.0
MBI06_g39483_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 1.1e-22 109.8 90 73.3
MBI06_g42850_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 1.1e-22 109.8 90 73.3
CANSAT54G2446 Cannabis sativa HOM05D005811 ORTHO05D007070 1.4e-22 109.4 96 64.6
MD03G1073700 Malus domestica HOM05D005811 ORTHO05D007070 1.4e-22 109.4 91 68.1
Duzib168G1366 Durio zibethinus HOM05D005811 ORTHO05D007070 3.1e-22 108.2 93 67.7
MD11G1079700 Malus domestica HOM05D005811 ORTHO05D007070 7.0e-22 107.1 91 68.1
Sabra16G0151600 Salix brachista HOM05D005811 ORTHO05D007070 7.0e-22 107.1 92 69.6
Potri.001G249600 Populus trichocarpa HOM05D005811 ORTHO05D007070 9.1e-22 106.7 92 69.6
THA.LOC104799405 Tarenaya hassleriana HOM05D005811 ORTHO05D007070 1.6e-21 105.9 98 63.3
Thecc.09G304900 Theobroma cacao HOM05D005811 ORTHO05D007070 1.6e-21 105.9 93 69.9
Sc06g0008440 Simmondsia chinensis HOM05D005811 ORTHO05D007070 2.7e-21 105.1 93 68.8
Manes.02G121312 Manihot esculenta HOM05D005811 ORTHO05D007070 3.5e-21 104.8 98 66.3
Sabra09G0031000 Salix brachista HOM05D005811 ORTHO05D007070 3.5e-21 104.8 89 70.8
TWI75G0861 Tripterygium wilfordii HOM05D005811 ORTHO05D007070 5.9e-21 104.0 92 69.6
Lalb_Chr04g0252281 Lupinus albus HOM05D005811 ORTHO05D007070 1.0e-20 103.2 92 65.2
CiPaw.14G060800 Carya illinoinensis HOM05D005811 ORTHO05D007070 1.3e-20 102.8 92 66.3
Ciclev10029657m.g Citrus clementina HOM05D005811 ORTHO05D007070 1.3e-20 102.8 99 63.6
Actinidia34450 Actinidia chinensis HOM05D000731 ORTHO05D003068 1.7e-20 102.4 91 71.4
Gohir.A05G089600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 1.7e-20 102.4 96 60.4
Lalb_Chr04g0252321 Lupinus albus HOM05D005811 ORTHO05D007070 6.5e-20 100.5 93 63.4
QL01p037422 Quercus lobata HOM05D005811 ORTHO05D007070 6.5e-20 100.5 92 65.2
Gorai.009G093000 Gossypium raimondii HOM05D005811 ORTHO05D007070 1.1e-19 99.8 98 60.2
Gohir.D05G090500 Gossypium hirsutum HOM05D005811 ORTHO05D007070 1.9e-19 99.0 98 58.2
Gohir.D03G117600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 3.2e-19 98.2 93 62.4
Gorai.003G124000 Gossypium raimondii HOM05D005811 ORTHO05D007070 4.2e-19 97.8 93 62.4
Sed0022374 Sechium edule HOM05D005811 ORTHO05D007070 4.2e-19 97.8 95 62.1
Gohir.A03G049700 Gossypium hirsutum HOM05D005811 ORTHO05D007070 7.2e-19 97.1 91 62.6
TPR.G24035 Trifolium pratense HOM05D005811 ORTHO05D007070 7.2e-19 97.1 101 58.4
Sed0014350 Sechium edule HOM05D005811 ORTHO05D007070 1.2e-18 96.3 89 61.8
Dinv28620 Davidia involucrata HOM05D005811 ORTHO05D007070 1.6e-18 95.9 88 69.3
arahy.Tifrunner.gnm1.ann1.8DRC0W Arachis hypogaea HOM05D005811 ORTHO05D007070 6.1e-18 94.0 95 60.0
arahy.Tifrunner.gnm1.ann1.AMG8UC Arachis hypogaea HOM05D005811 ORTHO05D007070 6.1e-18 94.0 95 60.0
Nn4g22044 Nelumbo nucifera HOM05D005811 ORTHO05D007070 6.1e-18 94.0 86 65.1
ClCG02G019670 Citrullus lanatus HOM05D005811 ORTHO05D007070 1.8e-17 92.4 97 59.8
Hund04884 Selenicereus undatus HOM05D004319 ORTHO05D007070 4.0e-17 91.3 84 61.9
CsaV3_6G016350 Cucumis sativus L. HOM05D005811 ORTHO05D007070 6.8e-17 90.5 97 58.8
MELO3C025865.2 Cucumis melo HOM05D005811 ORTHO05D007070 8.8e-17 90.1 96 58.3
vmacro02985 Vaccinium macrocarpon HOM05D005811 ORTHO05D007070 1.2e-16 89.7 88 61.4
RcHm_v2.0_Chr5g0068741 Rosa chinensis HOM05D005811 ORTHO05D007070 1.5e-16 89.4 98 60.2
ATR0618G101 Amborella trichopoda HOM05D005811 ORTHO05D007070 3.4e-16 88.2 91 59.3
HPP92_012634 Vanilla planifolia HOM05D005811 ORTHO05D007070 3.4e-16 88.2 102 56.9
Manes.01G163700 Manihot esculenta HOM05D005811 ORTHO05D007070 4.4e-16 87.8 97 56.7
Nitab4.5_0000010g0190 Nicotiana tabacum HOM05D005811 ORTHO05D007070 7.5e-16 87.0 113 53.1
Solyc06g076790.1 Solanum lycopersicum HOM05D005811 ORTHO05D007070 3.7e-15 84.7 105 56.2
Aqoxy2G00950 Aquilegia oxysepala HOM05D005811 ORTHO05D007070 4.8e-15 84.3 86 59.3
Nitab4.5_0004144g0020 Nicotiana tabacum HOM05D005811 ORTHO05D007070 4.8e-15 84.3 113 52.2
BcaC04g19852 Brassica carinata HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
BcaC04g19853 Brassica carinata HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
A10p15470 Brassica napus HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
C09p51020 Brassica napus HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
BolC9t57959H Brassica oleracea HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
BraA10t43688Z Brassica rapa HOM05D005811 ORTHO05D007070 1.4e-14 82.8 103 51.5
Nn3g20363 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.4e-14 82.8 63 73.0
Thhalv10015099m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 1.8e-14 82.4 104 51.9
Rhsim13G0071700 Rhododendron simsii HOM05D005811 ORTHO05D007070 2.4e-14 82.0 91 57.1
Sp6g20560 Schrenkiella parvula HOM05D005811 ORTHO05D007070 2.4e-14 82.0 103 52.4
Hma1.2p1_1010F.1_g247360 Hydrangea macrophylla HOM05D005811 ORTHO05D007070 3.1e-14 81.6 94 59.6
CARHR272810 Cardamine hirsuta HOM05D005811 ORTHO05D007070 5.4e-14 80.9 102 49.0
MSTRG.18574 Avicennia marina HOM05D005811 ORTHO05D007070 7.0e-14 80.5 100 59.0
MBI05_g30574_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 1.2e-13 79.7 80 60.0
Nn1g05379 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.2e-13 79.7 61 73.8
Potri.009G043600 Populus trichocarpa HOM05D005811 ORTHO05D007070 2.0e-13 79.0 90 55.6
CAN.G394.109 Capsicum annuum HOM05D005811 ORTHO05D007070 2.7e-13 78.6 80 61.2
Ah.15g099770 Amaranthus hybridus HOM05D005811 ORTHO05D007070 4.5e-13 77.8 100 50.0
Dinv14462 Davidia involucrata HOM05D005811 ORTHO05D007070 7.7e-13 77.0 62 69.4
Aa31LG4G15980 Aethionema arabicum HOM05D005811 ORTHO05D007070 1.7e-12 75.9 106 50.0
Medtr3g462990 Medicago truncatula HOM05D005811 ORTHO05D007070 2.9e-12 75.1 50 78.0
Thhalv10010831m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 5.0e-12 74.3 110 46.4
EL10Ac7g16131 Beta vulgaris HOM05D005811 ORTHO05D007070 8.6e-12 73.6 91 50.5
BcaB01g00949 Brassica carinata HOM05D005811 ORTHO05D007070 8.6e-12 73.6 105 47.6
AL5G26310 Arabidopsis lyrata HOM05D005811 ORTHO05D007070 1.1e-11 73.2 94 48.9
Carub.0005s1331 Capsella rubella HOM05D005811 ORTHO05D007070 1.1e-11 73.2 107 47.7
AUR62020102 Chenopodium quinoa HOM05D005811 ORTHO05D007070 1.1e-11 73.2 102 50.0
PGSC0003DMG400030440 Solanum tuberosum HOM05D005811 ORTHO05D007070 1.1e-11 73.2 65 63.1
AT3G47070 Arabidopsis thaliana HOM05D005811 ORTHO05D007070 1.5e-11 72.8 97 49.5
FvH4_3g38260 Fragaria vesca HOM05D005811 ORTHO05D007070 1.9e-11 72.4 100 54.0
FAN11G0366 Fragaria x ananassa HOM05D005811 ORTHO05D007070 1.9e-11 72.4 100 54.0
Nitab4.5_0000102g0070 Nicotiana tabacum HOM05D005811 ORTHO05D007070 2.5e-11 72.0 100 52.0
A06p20460 Brassica napus HOM05D005811 ORTHO05D007070 3.3e-11 71.6 105 46.7
BraA06t25121Z Brassica rapa HOM05D005811 ORTHO05D007070 3.3e-11 71.6 105 46.7
AUR62001678 Chenopodium quinoa HOM05D005811 ORTHO05D007070 3.3e-11 71.6 102 50.0
CDE02G0229 Ceratophyllum demersum HOM05D005811 ORTHO05D007070 4.2e-11 71.2 83 51.8
A06p27110 Brassica napus HOM05D005811 ORTHO05D007070 5.5e-11 70.9 96 47.9
BraA06t25647Z Brassica rapa HOM05D005811 ORTHO05D007070 5.5e-11 70.9 96 47.9
FAN16G2097 Fragaria x ananassa HOM05D005811 ORTHO05D007070 5.5e-11 70.9 100 53.0
C03p71300 Brassica napus HOM05D005811 ORTHO05D007070 7.2e-11 70.5 105 45.7
BolC3t19415H Brassica oleracea HOM05D005811 ORTHO05D007070 7.2e-11 70.5 105 45.7
Lalb_Chr10g0103291 Lupinus albus HOM05D005811 ORTHO05D007070 9.5e-11 70.1 94 47.9
BcaC01g02249 Brassica carinata HOM05D005811 ORTHO05D007070 1.6e-10 69.3 96 46.9
BolC3t19011H Brassica oleracea HOM05D005811 ORTHO05D007070 1.6e-10 69.3 96 46.9
FAN25G1329 Fragaria x ananassa HOM05D005811 ORTHO05D007070 1.6e-10 69.3 100 52.0
BcaC01g01857 Brassica carinata HOM05D005811 ORTHO05D007070 2.8e-10 68.6 105 45.7
BcaC01g01858 Brassica carinata HOM05D005811 ORTHO05D007070 2.8e-10 68.6 105 45.7
BNapus_Darmor_BZH_scaffold_82p00020 Brassica napus HOM05D005811 ORTHO05D007070 2.8e-10 68.6 96 46.9
FAN21G0983 Fragaria x ananassa HOM05D005811 ORTHO05D007070 3.6e-10 68.2 100 52.0
Sp5g14660 Schrenkiella parvula HOM05D005811 ORTHO05D007070 6.1e-10 67.4 119 41.2
Ca_14913_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 1.4e-09 66.2 97 46.4
Peaxi162Scf01058g00001 Petunia axillaris HOM05D005811 ORTHO05D007070 1.4e-09 66.2 64 60.9
PGSC0003DMG400004165 Solanum tuberosum HOM05D005811 ORTHO05D007070 1.8e-09 65.9 102 51.0
BcaB02g10703 Brassica carinata HOM05D005811 ORTHO05D007070 2.3e-09 65.5 96 46.9
Sopen06g033180 Solanum pennellii HOM05D005811 ORTHO05D007070 4.0e-09 64.7 105 46.7
GSVIVG01024785001 Vitis vinifera HOM05D005811 ORTHO05D007070 2.0e-08 62.4 89 48.3
unitig_746.g26735 Utricularia gibba HOM05D005811 ORTHO05D007070 4.4e-08 61.2 66 57.6
Migut.D02091 Erythranthe guttata HOM05D005811 ORTHO05D007070 9.8e-08 60.1 102 49.0
DCAR_018965 Daucus carota HOM05D005811 ORTHO05D007070 1.1e-06 56.6 102 44.1
SGA_v2.0_scaffold443G51693 Striga asiatica HOM05D005811 ORTHO05D007070 1.1e-06 56.6 66 59.1
unitig_899.g15251 Utricularia gibba HOM05D005811 ORTHO05D007070 1.8e-06 55.8 101 44.6
Carub.0008s1950 Capsella rubella HOM05D005811 ORTHO05D007070 3.1e-06 55.1 59 54.2
Lsat_1_v5_gn_8_71220 Lactuca sativa HOM05D005811 ORTHO05D007070 3.1e-06 55.1 73 47.9
Os07g0243150 Oryza sativa ssp. japonica HOM05D019609 ORTHO05D007070 4.1e-06 54.7 79 48.1


User provided reference genes

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