Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05588_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 1.1e-60 236.5 123 100.0
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 6.0e-51 204.1 122 90.2
Medtr5g069980 Medicago truncatula HOM05D010371 ORTHO05D003507 3.6e-48 194.9 121 86.8
LjContig00155g0017503 Lotus japonicus HOM05D010371 ORTHO05D003507 6.2e-48 194.1 123 80.5
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 1.8e-47 192.6 114 88.6
Phvul.008G262500 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 1.0e-42 176.8 123 75.6
VMungo0647G2148 Vigna mungo HOM05D010371 ORTHO05D003507 3.9e-42 174.9 123 75.6
Glyma.02G225600 Glycine max HOM05D010371 ORTHO05D003507 5.6e-41 171.0 123 74.8
Glyma.14G192400 Glycine max HOM05D010371 ORTHO05D003507 5.6e-41 171.0 123 74.0
Lalb_Chr10g0103281 Lupinus albus HOM05D010371 ORTHO05D003507 1.5e-38 162.9 129 69.0
arahy.Tifrunner.gnm1.ann1.0452KN Arachis hypogaea HOM05D010371 ORTHO05D003507 2.4e-36 155.6 115 70.4
arahy.Tifrunner.gnm1.ann1.N7G3Q4 Arachis hypogaea HOM05D010371 ORTHO05D003507 2.1e-35 152.5 115 69.6
Lalb_Chr04g0252311 Lupinus albus HOM05D010371 ORTHO05D003507 1.9e-33 146.0 125 68.0
Phvul.006G065200 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 3.9e-26 121.7 120 57.5
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 8.7e-26 120.6 120 55.8
Lj6g0011323 Lotus japonicus HOM05D010371 ORTHO05D003507 1.6e-24 116.3 122 51.6
VMungo0540G0421 Vigna mungo HOM05D010371 ORTHO05D003507 8.2e-24 114.0 113 55.8
Medtr3g462980 Medicago truncatula HOM05D010371 ORTHO05D003507 2.0e-22 109.4 124 53.2
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 5.9e-22 107.8 120 51.7
TPR.G13269 Trifolium pratense HOM05D010371 ORTHO05D003507 5.9e-22 107.8 120 51.7
Ca_14912_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 3.6e-19 98.6 113 53.1
Medtr3g462960 Medicago truncatula HOM05D010371 ORTHO05D003507 1.0e-18 97.1 108 52.8
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 9.4e-12 73.9 100 47.0
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.1e-11 72.8 101 48.5
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 1.0e-10 70.5 107 49.5
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.4e-10 70.1 97 45.4
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 1.8e-10 69.7 89 52.8
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 3.9e-10 68.6 89 44.9
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 8.8e-10 67.4 114 40.4
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 1.1e-09 67.0 94 46.8
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 1.1e-09 67.0 113 41.6
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 1.1e-09 67.0 116 40.5
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.5e-09 66.6 116 41.4
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 2.0e-09 66.2 107 41.1
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 2.6e-09 65.9 81 46.9
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 3.3e-09 65.5 110 40.0
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 3.3e-09 65.5 96 44.8
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 4.4e-09 65.1 89 47.2
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 5.7e-09 64.7 80 45.0
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 5.7e-09 64.7 113 41.6
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 7.4e-09 64.3 120 39.2
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 9.7e-09 63.9 113 41.6
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 9.7e-09 63.9 86 48.8
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 9.7e-09 63.9 86 46.5
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 9.7e-09 63.9 112 43.8
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.3e-08 63.5 86 47.7
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.3e-08 63.5 86 47.7
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.3e-08 63.5 86 47.7
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.7e-08 63.2 109 42.2
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.8e-08 62.4 108 42.6
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 3.7e-08 62.0 115 41.7
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 6.3e-08 61.2 87 48.3
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 8.2e-08 60.8 78 46.2
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 8.2e-08 60.8 77 51.9
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 8.2e-08 60.8 77 51.9
Prupe.6G060400 Prunus persica HOM05D012510 ORTHO05D015115 8.2e-08 60.8 114 39.5
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 1.4e-07 60.1 109 40.4
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 1.8e-07 59.7 109 41.3
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 2.4e-07 59.3 113 35.4
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.4e-07 59.3 110 44.5
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.4e-07 59.3 110 44.5
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.4e-07 59.3 110 44.5
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 2.4e-07 59.3 98 38.8
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.1e-07 58.9 77 49.4
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 4.1e-07 58.5 109 42.2
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 4.1e-07 58.5 109 36.7
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 5.3e-07 58.2 112 43.8
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 5.3e-07 58.2 108 39.8
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 7.0e-07 57.8 96 41.7
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 9.1e-07 57.4 86 47.7
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 9.1e-07 57.4 115 40.0
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.1e-07 57.4 97 45.4
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 1.5e-06 56.6 84 46.4
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 1.5e-06 56.6 91 39.6
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 1.5e-06 56.6 90 40.0
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.5e-06 56.6 113 38.9
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 2.6e-06 55.8 115 37.4
A10p05870 Brassica napus HOM05D005325 ORTHO05D003507 3.4e-06 55.5 90 40.0
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 3.4e-06 55.5 91 38.5
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 3.4e-06 55.5 91 38.5
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 3.4e-06 55.5 81 40.7
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 3.4e-06 55.5 93 38.7
Lalb_Chr13g0291241 Lupinus albus HOM05D004233 ORTHO05D003507 3.4e-06 55.5 95 42.1
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 3.4e-06 55.5 107 41.1
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.5e-06 55.1 97 44.3
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 4.5e-06 55.1 80 41.2
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 5.9e-06 54.7 81 40.7
Medtr7g067365 Medicago truncatula HOM05D004233 ORTHO05D003507 5.9e-06 54.7 91 39.6
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 5.9e-06 54.7 105 41.9
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 5.9e-06 54.7 109 40.4
Gohir.A07G102900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 7.7e-06 54.3 97 43.3
Sed0004609 Sechium edule HOM05D025966 ORTHO05D003507 7.7e-06 54.3 95 36.8


User provided reference genes

Program Settings