Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.3e-179 632.9 314 100.0
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 3.5e-148 528.5 312 84.6
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-143 513.5 309 82.8
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-141 506.9 309 82.8
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 3.3e-138 495.4 312 79.2
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.0e-131 473.8 309 75.7
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.4e-131 473.4 312 76.3
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.0e-126 457.2 309 73.8
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 3.0e-123 445.7 312 73.1
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.5e-98 363.6 312 62.5
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.6e-95 353.6 293 64.2
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 6.2e-92 341.7 244 74.6
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 2.2e-89 333.2 330 56.4
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 3.0e-86 322.8 326 54.0
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 3.9e-86 322.4 313 55.6
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 8.6e-86 321.2 333 52.9
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 4.3e-85 318.9 325 54.5
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 3.6e-84 315.8 319 52.7
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 8.1e-84 314.7 324 53.1
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.4e-83 313.9 303 55.8
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.8e-83 311.6 336 53.6
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 8.9e-83 311.2 281 56.2
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.0e-82 310.1 326 53.4
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.4e-82 308.9 323 53.9
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 7.5e-82 308.1 319 54.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 7.5e-82 308.1 318 52.8
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 7.5e-82 308.1 281 55.2
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.7e-81 307.0 181 84.0
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 2.9e-81 306.2 292 54.5
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.4e-81 305.1 328 55.5
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 8.3e-81 304.7 323 52.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.1e-80 304.3 321 52.0
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.4e-80 303.9 281 54.1
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.9e-80 303.5 290 54.5
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.9e-80 303.5 317 52.4
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 5.4e-80 302.0 265 58.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 1.2e-79 300.8 293 55.6
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.7e-79 299.7 290 56.2
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 4.6e-79 298.9 293 56.0
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 6.0e-79 298.5 310 54.2
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 1.0e-78 297.7 313 53.4
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.0e-78 297.7 323 53.9
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.9e-78 295.8 336 50.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 8.6e-78 294.7 330 51.2
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.5e-77 293.9 286 52.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.5e-77 293.9 327 50.5
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.3e-77 292.7 344 47.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.1e-76 290.0 310 52.9
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.1e-76 290.0 329 49.5
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.8e-76 289.7 326 49.7
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 2.8e-76 289.7 306 50.7
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 3.6e-76 289.3 325 49.2
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 4.7e-76 288.9 273 54.2
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 6.2e-76 288.5 293 52.9
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 6.2e-76 288.5 281 55.2
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.8e-75 287.0 290 53.1
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.3e-75 286.6 326 48.8
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.6e-74 283.1 321 50.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.6e-74 283.1 286 51.7
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 1.3e-73 280.8 320 49.7
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.2e-73 280.0 325 48.3
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 2.2e-73 280.0 184 76.6
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 3.7e-73 279.3 319 48.3
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 8.4e-73 278.1 329 48.3
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.1e-72 277.7 329 47.7
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.9e-72 276.9 277 52.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.2e-71 274.2 328 49.7
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-71 274.2 252 54.0
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.7e-71 273.1 304 49.7
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 3.5e-71 272.7 329 47.7
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.3e-70 270.0 290 51.4
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.9e-70 269.2 289 51.6
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 6.6e-70 268.5 324 48.8
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.3e-69 265.8 281 52.0
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.2e-68 264.2 380 44.5
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.1e-68 263.5 314 47.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.4e-67 260.8 329 47.7
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 6.8e-67 258.5 227 59.0
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 8.9e-67 258.1 319 43.9
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.2e-66 257.7 317 47.6
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.6e-66 256.5 228 57.0
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 7.6e-66 255.0 317 47.6
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.3e-65 254.2 273 51.6
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.8e-65 252.7 281 47.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.4e-64 250.8 318 46.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.4e-64 250.8 304 44.7
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 3.2e-64 249.6 277 46.9
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.1e-63 246.9 258 48.4
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 1.3e-62 244.2 200 62.5
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 2.8e-60 236.5 136 85.3
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.1e-59 234.6 333 45.0
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.0e-58 230.3 358 41.6
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-56 224.6 262 47.3
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.1e-56 224.6 253 46.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.3e-54 217.6 332 39.5
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.7e-54 217.2 322 41.3
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 2.3e-54 216.9 321 42.4
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 5.1e-54 215.7 324 40.1
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 4.8e-52 209.1 320 41.9
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 9.0e-51 204.9 233 49.8
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 9.0e-51 204.9 321 41.4
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.0e-50 203.8 280 41.4
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 1.4e-48 197.6 238 48.3
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 2.7e-47 193.4 373 34.6
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.1e-43 181.4 229 43.7
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 5.3e-43 179.1 316 37.0
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.7e-41 174.1 257 38.9
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 2.9e-41 173.3 252 40.9
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 6.5e-41 172.2 242 44.2
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 6.5e-41 172.2 275 40.0
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.9e-39 165.2 303 37.3
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 5.7e-37 159.1 309 37.9
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.1e-35 153.3 174 50.0
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.2e-34 151.4 346 32.9
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.2e-32 142.9 141 53.9
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 3.3e-29 133.3 130 55.4
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 4.3e-29 132.9 130 55.4
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 3.1e-27 126.7 184 40.2
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.9e-27 125.6 300 32.7
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.5e-26 124.4 167 44.3
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 9.4e-24 115.2 131 45.0
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.3e-22 110.5 124 52.4
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 3.3e-21 106.7 298 26.5
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.7e-20 103.2 86 62.8
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.4e-19 100.5 89 58.4
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 5.9e-18 95.9 184 34.2
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.6e-15 87.8 174 34.5
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 5.2e-14 82.8 65 61.5
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.3e-13 80.1 70 62.9
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 7.4e-13 79.0 317 27.4
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.5e-10 69.7 66 54.5
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 1.7e-09 67.8 99 40.4
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 9.4e-08 62.0 61 54.1
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.3e-06 57.4 57 49.1
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 4.0e-06 56.6 47 63.8


User provided reference genes

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