Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05478_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.1e-52 208.8 105 100.0
Ca_11976_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.9e-22 108.6 110 55.5
Ca_11705_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-20 102.8 73 72.6
Ca_11925_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-18 96.7 74 67.6
Ca_04384_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.7e-17 91.7 104 53.8
Ca_03736_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-16 90.1 138 37.7
Ca_05390_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-16 89.4 109 51.4
Ca_12228_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-16 89.0 104 49.0
Ca_19720_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.0e-16 87.4 136 35.3
Ca_04987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-15 86.7 135 34.1
Ca_14154_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.7e-15 84.0 135 36.3
Ca_19547_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.0e-14 83.6 135 35.6
Ca_20927_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-13 80.1 128 37.5
VMungo1127G0233 Vigna mungo HOM05D000577 ORTHO05D000001 1.1e-13 80.1 135 33.3
Ca_05908_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-13 79.3 135 34.1
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-13 79.3 137 34.3
Ca_04708_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-12 76.3 135 34.8
Ca_06059_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.7e-12 74.7 73 43.8
Ca_26745_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-11 72.0 129 32.6
CSS0014963 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-11 71.6 117 35.0
Ca_14263_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.0e-11 71.6 137 33.6
Ca_21025_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.0e-11 71.6 121 36.4
CSS0045881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-11 71.2 116 34.5
Ca_02573_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 1.2e-10 70.1 73 47.9
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-10 70.1 73 45.2
Ca_27230_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-10 70.1 73 46.6
CSS0040701 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 69.7 116 31.9
CSS0048213 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-10 69.7 117 33.3
TPR.G18997 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-10 69.7 73 47.9
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-10 69.3 127 32.3
Ca_06737_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.4e-10 68.2 105 39.0
Ca_19310_v3 Cicer arietinum L. HOM05D014812 ORTHO05D015605 4.4e-10 68.2 135 32.6
Ca_27060_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.4e-10 68.2 73 46.6
Ca_02487_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.7e-10 67.8 122 33.6
Ca_23665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.7e-10 67.8 73 46.6
Ca_14589_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.5e-10 67.4 73 45.2
Ca_01733_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-09 66.6 73 43.8
Ca_15813_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-09 66.6 135 31.9
Ca_26899_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-09 66.6 73 43.8
Ca_13244_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.2e-09 65.9 73 46.6
Ca_18229_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.2e-09 65.9 73 43.8
Ca_02333_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-09 65.5 63 44.4
Ca_11984_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-09 65.5 33 81.8
Ca_17123_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-09 65.5 73 43.8
Ca_25778_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-09 65.5 73 42.5
Lalb_Chr13g0304251 Lupinus albus HOM05D000002 ORTHO05D000001 2.8e-09 65.5 73 42.5
Ca_05610_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.7e-09 65.1 73 45.2
VMungo1080G1410 Vigna mungo HOM05D000002 ORTHO05D000001 3.7e-09 65.1 64 46.9
Ca_05343_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.3e-09 64.3 73 42.5
CSS0011358 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-08 63.5 135 28.1
Ca_11549_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.4e-08 63.2 84 41.7
Ca_01928_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-08 62.8 73 41.1
Ca_04634_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-08 62.8 121 31.4
SHI07165 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-08 62.0 134 30.6
Ca_07516_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-08 61.6 73 41.1
Ca_20728_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.1e-08 61.6 43 67.4
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-08 61.6 134 29.9
Ca_06734_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.4e-08 61.2 67 41.8
Ca_14987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.4e-08 61.2 73 41.1
Ca_26986_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.4e-08 61.2 69 58.0
Ca_15544_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.0e-08 60.8 69 43.5
CSS0019076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-08 60.5 116 30.2
Ca_05915_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-07 60.1 73 38.4
Ca_26646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-07 59.7 55 58.2
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 2.0e-07 59.3 133 27.8
Ca_11646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-07 59.3 43 62.8
Ca_19090_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-07 59.3 73 42.5
CSS0012618 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-07 58.9 100 34.0
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 2.7e-07 58.9 134 29.9
SHI35127 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.5 135 28.9
CSS0040389 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-07 57.8 121 30.6
Ca_06069_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-07 57.8 73 39.7
Ca_15812_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-07 57.8 73 38.4
Ca_27154_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.9e-07 57.8 102 34.3
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-07 57.8 134 29.1
Ca_26148_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 7.7e-07 57.4 71 39.4
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-07 57.4 133 33.1
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-07 57.4 133 33.1
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-07 57.4 133 33.1
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-07 57.4 133 33.1
Hma1.2p1_2144F.1_g315030 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-06 57.0 88 37.5
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 133 27.1
AUR62016579 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.6 98 31.6
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 134 29.1
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 132 26.5
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 132 26.5
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 132 26.5
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 132 26.5
Hma1.2p1_3199F.1_g333880 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-06 56.2 104 35.6
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 136 26.5
MSTRG.22736 Avicennia marina HOM05D000002 ORTHO05D000001 2.9e-06 55.5 136 27.9
Ca_23646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.9e-06 55.5 114 33.3
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-06 55.1 134 29.1
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 134 24.6
AUR62039609 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.0e-06 54.7 106 30.2
Ca_05465_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.0e-06 54.7 43 58.1
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 133 29.3
CSS0030158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 54.3 116 28.4
SHI38274 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-06 54.3 137 27.7
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-06 53.9 133 28.6
Ca_25401_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.6e-06 53.9 33 69.7
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.6e-06 53.9 133 28.6
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 8.6e-06 53.9 140 27.1


User provided reference genes

Program Settings