Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 4.3e-41 171.0 93 100.0
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 4.0e-31 137.9 91 82.4
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 4.9e-29 131.0 89 82.0
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 1.9e-25 119.0 87 75.9
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 4.3e-25 117.9 87 74.7
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 4.3e-25 117.9 88 73.9
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 6.8e-23 110.5 90 68.9
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 8.4e-21 103.6 86 68.6
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 6.6e-18 94.0 88 62.5
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 2.1e-16 89.0 84 59.5
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 3.6e-16 88.2 69 68.1
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 1.4e-15 86.3 88 58.0
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 1.4e-15 86.3 66 66.7
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 3.1e-15 85.1 69 66.7
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 5.2e-15 84.3 93 55.9
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 6.8e-15 84.0 65 67.7
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 1.2e-14 83.2 66 65.2
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 1.5e-14 82.8 91 52.7
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 2.6e-14 82.0 79 58.2
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 7.6e-14 80.5 82 54.9
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 7.6e-14 80.5 77 62.3
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 7.6e-14 80.5 77 62.3
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 1.3e-13 79.7 70 60.0
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 3.8e-13 78.2 82 56.1
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 3.2e-12 75.1 69 58.0
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 3.2e-12 75.1 65 63.1
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 4.2e-12 74.7 91 49.5
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 5.4e-12 74.3 75 54.7
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 5.4e-12 74.3 101 48.5
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 5.4e-12 74.3 81 53.1
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 5.4e-12 74.3 72 56.9
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 9.3e-12 73.6 75 53.3
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 1.2e-11 73.2 69 59.4
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 1.6e-11 72.8 69 56.5
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 2.1e-11 72.4 65 58.5
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 2.7e-11 72.0 66 54.5
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 3.5e-11 71.6 87 48.3
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 4.6e-11 71.2 75 53.3
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 6.0e-11 70.9 75 53.3
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 6.0e-11 70.9 69 59.4
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 7.8e-11 70.5 87 48.3
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 7.8e-11 70.5 87 48.3
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 7.8e-11 70.5 87 48.3
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 7.8e-11 70.5 71 54.9
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 1.0e-10 70.1 93 44.1
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 1.0e-10 70.1 84 50.0
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.3e-10 69.7 67 55.2
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 1.3e-10 69.7 73 52.1
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 1.3e-10 69.7 93 44.1
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 1.3e-10 69.7 84 50.0
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 1.3e-10 69.7 94 52.1
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 1.7e-10 69.3 87 48.3
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 1.7e-10 69.3 87 47.1
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 2.3e-10 68.9 65 56.9
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 2.3e-10 68.9 67 53.7
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 3.9e-10 68.2 75 52.0
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 3.9e-10 68.2 88 46.6
Glyma.14G183300 Glycine max HOM05D007802 ORTHO05D009879 3.9e-10 68.2 43 81.4
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 3.9e-10 68.2 77 54.5
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 5.1e-10 67.8 92 45.7
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 5.1e-10 67.8 95 45.3
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 5.1e-10 67.8 95 45.3
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 6.6e-10 67.4 78 47.4
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 8.7e-10 67.0 86 47.7
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.1e-09 66.6 70 54.3
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 1.5e-09 66.2 65 50.8
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 1.9e-09 65.9 69 50.7
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 1.9e-09 65.9 83 49.4
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 1.9e-09 65.9 75 53.3
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 4.3e-09 64.7 69 55.1
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 1.6e-08 62.8 82 50.0
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 2.8e-08 62.0 88 44.3
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 1.8e-07 59.3 67 47.8
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 2.4e-07 58.9 70 47.1
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 2.4e-07 58.9 70 47.1
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 4.0e-07 58.2 88 42.0
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 5.3e-07 57.8 71 42.3
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 1.2e-06 56.6 79 44.3
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 5.8e-06 54.3 106 35.8
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 7.6e-06 53.9 64 45.3


User provided reference genes

Program Settings