Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 1.2e-124 449.9 232 100.0
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 8.5e-107 390.6 216 91.2
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 1.1e-101 373.6 217 87.6
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 3.8e-99 365.2 206 88.8
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 1.7e-91 339.7 224 76.3
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 6.6e-91 337.8 223 78.9
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 4.7e-89 331.6 218 79.8
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 8.0e-89 330.9 217 77.0
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 4.1e-85 318.5 232 71.1
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 4.1e-85 318.5 224 73.7
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.3e-83 313.5 248 66.5
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 3.6e-73 278.9 212 66.5
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 9.9e-71 270.8 218 64.7
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 4.9e-70 268.5 222 63.1
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 4.9e-70 268.5 202 67.8
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 8.3e-70 267.7 218 64.2
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 1.4e-69 266.9 216 62.0
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 4.1e-69 265.4 213 64.8
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 7.1e-69 264.6 220 64.1
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 1.2e-68 263.8 212 62.7
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.6e-68 263.5 220 63.2
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 1.6e-68 263.5 219 62.6
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 3.5e-68 262.3 215 61.4
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 6.0e-68 261.5 214 63.1
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.3e-67 260.4 214 62.1
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 1.7e-67 260.0 213 64.3
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 1.7e-67 260.0 214 62.1
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 3.0e-67 259.2 201 65.2
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 3.9e-67 258.8 214 62.1
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 8.6e-67 257.7 216 62.0
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 3.3e-66 255.8 210 62.4
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 2.8e-65 252.7 218 61.0
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 3.6e-65 252.3 214 61.7
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 3.6e-65 252.3 211 62.1
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 4.7e-65 251.9 213 61.5
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 6.2e-65 251.5 207 61.4
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 8.1e-65 251.1 218 61.0
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 8.1e-65 251.1 215 63.3
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 1.1e-64 250.8 248 54.4
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 1.8e-64 250.0 209 61.7
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 3.1e-64 249.2 268 53.4
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 3.1e-64 249.2 207 61.4
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 5.2e-64 248.4 221 58.8
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 5.2e-64 248.4 213 57.7
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 6.8e-64 248.1 209 61.7
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 6.8e-64 248.1 217 61.3
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 2.6e-63 246.1 212 62.7
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 2.6e-63 246.1 211 59.7
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 7.6e-63 244.6 215 60.5
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 7.6e-63 244.6 213 61.0
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 1.7e-62 243.4 209 62.2
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 1.1e-61 240.7 216 56.0
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 4.1e-61 238.8 204 59.3
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 3.5e-60 235.7 213 59.2
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 4.6e-60 235.3 217 55.8
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 4.6e-60 235.3 222 55.4
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 6.6e-59 231.5 210 56.2
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 1.5e-58 230.3 213 56.8
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 1.5e-58 230.3 185 65.9
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 5.6e-58 228.4 213 54.5
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 2.8e-57 226.1 207 55.6
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 9.9e-55 217.6 218 54.1
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 1.3e-54 217.2 216 55.1
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 2.2e-54 216.5 216 54.2
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 3.8e-54 215.7 205 55.1
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 4.9e-54 215.3 220 54.1
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 6.4e-54 214.9 214 53.7
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 3.2e-53 212.6 213 50.2
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 7.1e-53 211.5 210 53.3
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 9.3e-53 211.1 200 56.0
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 6.0e-52 208.4 217 52.1
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 3.9e-51 205.7 222 51.4
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 3.9e-51 205.7 222 51.4
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 3.9e-51 205.7 222 51.4
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 5.1e-51 205.3 222 49.5
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 5.1e-51 205.3 208 51.0
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 5.1e-51 205.3 221 50.7
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 6.6e-51 204.9 205 53.2
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 8.7e-51 204.5 216 51.9
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 2.5e-50 203.0 225 49.8
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 2.5e-50 203.0 225 49.8
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 3.3e-50 202.6 210 52.4
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 9.6e-50 201.1 217 51.6
Sc08g0007030 Simmondsia chinensis HOM05D006752 ORTHO05D008597 3.6e-49 199.1 194 53.1
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 1.1e-48 197.6 203 51.7
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 4.0e-48 195.7 212 48.1
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 2.6e-47 193.0 205 50.7
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 2.9e-46 189.5 203 45.8
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 1.9e-45 186.8 212 48.1
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 3.2e-45 186.0 216 49.1
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 5.4e-45 185.3 224 46.9
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 1.3e-43 180.6 154 60.4
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 1.8e-43 180.3 255 41.6
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 5.3e-40 168.7 207 46.9
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 3.4e-39 166.0 126 65.9
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 8.2e-33 144.8 203 42.9
Cc08_g07650 Coffea canephora HOM05D006752 ORTHO05D008597 4.0e-32 142.5 122 61.5
MD00G1026200 Malus domestica HOM05D006752 ORTHO05D008597 1.4e-29 134.0 186 45.2
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.9e-26 123.6 213 40.4
MD02G1041600 Malus domestica HOM05D006752 ORTHO05D008597 4.8e-25 119.0 92 64.1
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 8.2e-25 118.2 200 38.5
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 8.2e-25 118.2 200 38.5
CSS0032277 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 5.3e-24 115.5 73 72.6
CBR_g41660 Chara braunii HOM05D001740 ORTHO05D001468 6.5e-22 108.6 202 33.7
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 5.5e-21 105.5 72 69.4
MD00G1027300 Malus domestica HOM05D006752 ORTHO05D008597 1.6e-20 104.0 70 70.0
MD02G1038900 Malus domestica HOM05D006752 ORTHO05D008597 7.4e-18 95.1 66 69.7
MCO09G826 Micromonas commoda HOM05D006752 ORTHO05D008597 1.5e-15 87.4 170 37.6
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 4.5e-15 85.9 180 31.1
MD02G1041500 Malus domestica HOM05D006752 ORTHO05D008597 1.0e-11 74.7 77 51.9
MD02G1040800 Malus domestica HOM05D006752 ORTHO05D008597 7.4e-10 68.6 77 48.1
MD11G1046200 Malus domestica HOM05D006752 ORTHO05D008597 1.1e-08 64.7 65 53.8
Cre17.g712450 Chlamydomonas reinhardtii HOM05D005415 ORTHO05D006242 1.4e-08 64.3 131 31.3
MD02G1041100 Malus domestica HOM05D006752 ORTHO05D008597 1.4e-08 64.3 103 40.8
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 2.0e-07 60.5 124 33.9
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 2.0e-07 60.5 123 33.3
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 4.5e-07 59.3 134 34.3
SMO173G0041 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 4.5e-07 59.3 134 33.6
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 4.5e-07 59.3 160 30.6
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 1.0e-06 58.2 123 33.3
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 1.0e-06 58.2 134 33.6
SMO146G0204 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 2.2e-06 57.0 134 33.6
MD02G1040400 Malus domestica HOM05D006752 ORTHO05D008597 2.9e-06 56.6 67 46.3
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 6.5e-06 55.5 123 32.5
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 8.5e-06 55.1 123 33.3


User provided reference genes

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