Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05402_v3 Cicer arietinum L. HOM05D000175 ORTHO05D003181 7.5e-71 270.4 136 100.0
Medtr5g065860 Medicago truncatula HOM05D000175 ORTHO05D003181 1.6e-20 103.2 73 71.2
VMungo0647G0933 Vigna mungo HOM05D000175 ORTHO05D003181 1.6e-20 103.2 120 47.5
TPR.G39842 Trifolium pratense HOM05D000175 ORTHO05D003181 7.9e-20 100.9 74 77.0
arahy.Tifrunner.gnm1.ann1.D8S8EX Arachis hypogaea HOM05D000175 ORTHO05D003181 9.1e-16 87.4 71 64.8
Cpa.g.sc309.4 Carica papaya HOM05D000175 ORTHO05D003181 2.0e-15 86.3 72 62.5
Psat2g066400 Pisum sativum HOM05D000175 ORTHO05D003181 2.6e-15 85.9 52 76.9
arahy.Tifrunner.gnm1.ann1.RGH25I Arachis hypogaea HOM05D000175 ORTHO05D003181 4.5e-15 85.1 71 63.4
CiPaw.07G167600 Carya illinoinensis HOM05D000175 ORTHO05D003181 1.0e-14 84.0 72 65.3
Glyma.02G212500 Glycine max HOM05D000175 ORTHO05D003181 6.5e-14 81.3 71 59.2
Phvul.008G180100 Phaseolus vulgaris HOM05D000175 ORTHO05D003181 6.5e-14 81.3 71 57.7
Glyma.14G180400 Glycine max HOM05D000175 ORTHO05D003181 2.5e-13 79.3 71 59.2
QL09p017250 Quercus lobata HOM05D000175 ORTHO05D003181 2.5e-13 79.3 73 61.6
CANSAT25G3410 Cannabis sativa HOM05D000175 ORTHO05D003181 4.2e-13 78.6 57 68.4
LjContig00408g0019229 Lotus japonicus HOM05D000175 ORTHO05D003181 5.5e-13 78.2 72 55.6
Haze_22338 Corylus avellana HOM05D000175 ORTHO05D003181 7.2e-13 77.8 56 71.4
Prupe.1G528300 Prunus persica HOM05D000175 ORTHO05D003181 7.2e-13 77.8 73 60.3
Sabra02G0081400 Salix brachista HOM05D000175 ORTHO05D003181 7.2e-13 77.8 72 59.7
Duzib093G1585 Durio zibethinus HOM05D000175 ORTHO05D003181 9.4e-13 77.4 44 84.1
Thecc.08G068500 Theobroma cacao HOM05D000175 ORTHO05D003181 9.4e-13 77.4 71 57.7
GSVIVG01009143001 Vitis vinifera HOM05D000175 ORTHO05D003181 9.4e-13 77.4 72 62.5
Hma1.2p1_0125F.1_g059070 Hydrangea macrophylla HOM05D000175 ORTHO05D003181 1.6e-12 76.6 72 56.9
Atru.chr13.1042 Acer truncatum HOM05D000175 ORTHO05D003181 2.1e-12 76.3 74 59.5
Duzib116G0288 Durio zibethinus HOM05D000175 ORTHO05D003181 2.1e-12 76.3 55 70.9
Lalb_Chr10g0102671 Lupinus albus HOM05D000175 ORTHO05D003181 2.7e-12 75.9 47 76.6
Gohir.D02G084900 Gossypium hirsutum HOM05D000175 ORTHO05D003181 3.6e-12 75.5 51 70.6
Gorai.005G095700 Gossypium raimondii HOM05D000175 ORTHO05D003181 4.7e-12 75.1 51 70.6
Manes.02G146500 Manihot esculenta HOM05D000175 ORTHO05D003181 4.7e-12 75.1 72 55.6
RcHm_v2.0_Chr7g0237331 Rosa chinensis HOM05D000175 ORTHO05D003181 4.7e-12 75.1 75 58.7
Ciclev10002824m.g Citrus clementina HOM05D000175 ORTHO05D003181 7.9e-12 74.3 50 72.0
FvH4_5g35690 Fragaria vesca HOM05D000175 ORTHO05D003181 7.9e-12 74.3 55 65.5
FAN04G2430 Fragaria x ananassa HOM05D000175 ORTHO05D003181 7.9e-12 74.3 72 55.6
TWI56G0585 Tripterygium wilfordii HOM05D000175 ORTHO05D003181 7.9e-12 74.3 56 66.1
Eucgr.F02131 Eucalyptus grandis HOM05D000175 ORTHO05D003181 1.0e-11 73.9 67 56.7
FAN18G1177 Fragaria x ananassa HOM05D000175 ORTHO05D003181 1.0e-11 73.9 72 55.6
Lalb_Chr17g0344431 Lupinus albus HOM05D000175 ORTHO05D003181 1.0e-11 73.9 55 67.3
Gohir.A02G077500 Gossypium hirsutum HOM05D000175 ORTHO05D003181 1.4e-11 73.6 51 68.6
CsaV3_3G047890 Cucumis sativus L. HOM05D000175 ORTHO05D003181 1.8e-11 73.2 59 62.7
Nitab4.5_0001507g0020 Nicotiana tabacum HOM05D000175 ORTHO05D003181 1.8e-11 73.2 42 81.0
Potri.002G103900 Populus trichocarpa HOM05D000175 ORTHO05D003181 1.8e-11 73.2 45 77.8
MSTRG.17441 Avicennia marina HOM05D000175 ORTHO05D003181 2.3e-11 72.8 47 74.5
ClCG11G014480 Citrullus lanatus HOM05D000175 ORTHO05D003181 2.3e-11 72.8 58 62.1
SGA_v2.0_scaffold81G25998 Striga asiatica HOM05D000175 ORTHO05D003181 2.3e-11 72.8 55 65.5
EL10Ac1g01080 Beta vulgaris HOM05D000175 ORTHO05D003181 3.9e-11 72.0 71 59.2
Cc10_g15660 Coffea canephora HOM05D000175 ORTHO05D003181 3.9e-11 72.0 41 78.0
FAN08G0086 Fragaria x ananassa HOM05D000175 ORTHO05D003181 3.9e-11 72.0 72 54.2
FAN13G1679 Fragaria x ananassa HOM05D000175 ORTHO05D003181 3.9e-11 72.0 72 55.6
Peaxi162Scf00281g00413 Petunia axillaris HOM05D000175 ORTHO05D003181 3.9e-11 72.0 42 78.6
PGR031G2354 Punica granatum HOM05D000175 ORTHO05D003181 3.9e-11 72.0 41 80.5
CAN.G1375.14 Capsicum annuum HOM05D000175 ORTHO05D003181 5.1e-11 71.6 41 80.5
Solyc04g076080.3 Solanum lycopersicum HOM05D000175 ORTHO05D003181 5.1e-11 71.6 41 80.5
PGSC0003DMG400012898 Solanum tuberosum HOM05D000175 ORTHO05D003181 5.1e-11 71.6 41 80.5
AUR62027859 Chenopodium quinoa HOM05D000175 ORTHO05D003181 6.7e-11 71.2 48 72.9
Nitab4.5_0013728g0020 Nicotiana tabacum HOM05D000175 ORTHO05D003181 8.8e-11 70.9 42 78.6
Migut.N02056 Erythranthe guttata HOM05D000175 ORTHO05D003181 1.1e-10 70.5 71 52.1
Lsat_1_v5_gn_9_75021 Lactuca sativa HOM05D000175 ORTHO05D003181 1.1e-10 70.5 67 53.7
MD15G1382100 Malus domestica HOM05D000175 ORTHO05D003181 1.1e-10 70.5 72 54.2
ECA232G3260 Erigeron canadensis HOM05D000008 ORTHO05D003181 1.5e-10 70.1 41 75.6
AUR62019022 Chenopodium quinoa HOM05D000175 ORTHO05D003181 2.0e-10 69.7 73 57.5
Rhsim06G0073700 Rhododendron simsii HOM05D000175 ORTHO05D003181 2.0e-10 69.7 50 70.0
Hund16869 Selenicereus undatus HOM05D000175 ORTHO05D003181 2.0e-10 69.7 50 70.0
MD08G1194000 Malus domestica HOM05D000175 ORTHO05D003181 2.6e-10 69.3 72 54.2
Actinidia30814 Actinidia chinensis HOM05D000175 ORTHO05D003181 3.3e-10 68.9 74 58.1
Ah.05g170680 Amaranthus hybridus HOM05D000175 ORTHO05D003181 3.3e-10 68.9 50 68.0
Sed0009547 Sechium edule HOM05D000175 ORTHO05D003181 3.3e-10 68.9 44 72.7
CSS0050123 Camellia sinensis var. sinensis HOM05D000175 ORTHO05D003181 4.4e-10 68.6 72 59.7
MBI02_g09038_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D003181 4.4e-10 68.6 38 81.6
Sed0025491 Sechium edule HOM05D000175 ORTHO05D003181 5.7e-10 68.2 53 62.3
Hma1.2p1_0010F.1_g006940 Hydrangea macrophylla HOM05D000175 ORTHO05D003181 7.4e-10 67.8 47 68.1
Zm00001eb255580 Zea mays HOM05D000175 ORTHO05D003181 7.4e-10 67.8 83 45.8
MELO3C003534.2 Cucumis melo HOM05D000175 ORTHO05D003181 9.7e-10 67.4 60 61.7
Sed0003078 Sechium edule HOM05D000175 ORTHO05D003181 9.7e-10 67.4 50 66.0
ATR0022G058 Amborella trichopoda HOM05D000175 ORTHO05D003181 1.7e-09 66.6 47 72.3
Oeu022869.1 Olea europaea HOM05D000175 ORTHO05D003181 1.7e-09 66.6 71 53.5
vmacro21318 Vaccinium macrocarpon HOM05D000175 ORTHO05D003181 2.2e-09 66.2 47 66.0
MSTRG.12563 Avicennia marina HOM05D000175 ORTHO05D003181 2.8e-09 65.9 38 81.6
Manes.18G060700 Manihot esculenta HOM05D000175 ORTHO05D003181 2.8e-09 65.9 36 83.3
Actinidia10372 Actinidia chinensis HOM05D000175 ORTHO05D003181 3.7e-09 65.5 72 52.8
Sc23g0000610 Simmondsia chinensis HOM05D000175 ORTHO05D003181 4.8e-09 65.1 72 50.0
TAR381G0979 Trochodendron aralioides HOM05D000175 ORTHO05D003181 4.8e-09 65.1 38 76.3
PSO541G0414 Papaver somniferum HOM05D000175 ORTHO05D003181 8.2e-09 64.3 44 68.2
unitig_744.g24484 Utricularia gibba HOM05D000175 ORTHO05D003181 8.2e-09 64.3 55 60.0
MELO3C011105.2 Cucumis melo HOM05D000175 ORTHO05D003181 1.1e-08 63.9 44 68.2
HanXRQChr09g0250881 Helianthus annuus HOM05D000175 ORTHO05D003181 1.1e-08 63.9 42 69.0
PSO675G0438 Papaver somniferum HOM05D000175 ORTHO05D003181 1.1e-08 63.9 56 55.4
CDE06G0449 Ceratophyllum demersum HOM05D000175 ORTHO05D003181 1.4e-08 63.5 48 62.5
Os02g0760000 Oryza sativa ssp. japonica HOM05D000175 ORTHO05D003181 1.4e-08 63.5 71 49.3
CsaV3_2G030430 Cucumis sativus L. HOM05D000175 ORTHO05D003181 1.8e-08 63.2 47 59.6
CDE03G0047 Ceratophyllum demersum HOM05D000175 ORTHO05D003181 5.3e-08 61.6 47 61.7
HPP92_023352 Vanilla planifolia HOM05D000175 ORTHO05D003181 2.6e-07 59.3 38 78.9
SGA_v2.0_scaffold80G25934 Striga asiatica HOM05D000175 ORTHO05D003181 4.5e-07 58.5 72 47.2


User provided reference genes

Program Settings