Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.8e-238 828.9 440 100.0
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 3.8e-180 635.2 441 82.1
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 2.8e-151 539.3 479 68.1
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 2.7e-146 522.7 425 72.7
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 4.2e-131 472.2 427 66.7
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.0e-128 463.4 474 61.2
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 4.4e-128 462.2 459 62.7
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 2.9e-124 449.5 438 63.9
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 9.8e-120 434.5 419 63.7
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 4.8e-119 432.2 479 57.2
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 6.3e-119 431.8 474 57.4
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 2.5e-107 393.3 444 59.5
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 2.0e-101 373.6 517 51.8
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.9e-94 350.5 499 49.5
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 4.7e-90 335.9 504 49.8
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 3.1e-89 333.2 506 49.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 3.4e-88 329.7 511 47.6
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.1e-86 324.7 495 46.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.4e-86 324.3 490 49.2
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 4.1e-86 322.8 505 48.7
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.2e-85 321.2 499 48.1
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 5.2e-81 305.8 489 47.4
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 5.8e-80 302.4 461 48.2
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.9e-79 300.1 495 48.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 2.4e-78 297.0 530 44.2
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 6.0e-77 292.4 496 45.8
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.3e-75 286.2 482 45.2
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 9.6e-75 285.0 488 44.9
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.8e-74 283.5 501 45.9
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.8e-73 280.8 433 46.7
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 2.2e-71 273.9 462 45.9
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 8.4e-71 271.9 481 44.7
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 8.4e-71 271.9 481 44.7
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.1e-70 271.6 501 45.1
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.4e-70 271.2 526 42.2
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.7e-69 266.9 486 44.0
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.5e-69 266.5 505 44.0
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 5.1e-68 262.7 491 42.0
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 9.6e-67 258.5 474 44.7
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 1.5e-64 251.1 466 45.5
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.0e-64 250.8 443 45.8
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.7e-63 247.7 505 42.6
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 2.9e-63 246.9 508 42.9
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.4e-62 243.8 508 43.1
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 7.9e-61 238.8 436 42.4
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.3e-60 238.0 525 39.6
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 8.7e-60 235.3 449 43.4
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.5e-59 233.8 475 41.9
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.8e-58 230.3 475 41.7
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-56 224.9 481 40.7
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 3.4e-56 223.4 473 43.1
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.0e-55 221.9 507 39.8
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 2.2e-55 220.7 462 42.0
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 5.5e-54 216.1 509 39.1
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 4.6e-53 213.0 437 42.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.3e-52 211.5 460 43.0
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 3.9e-52 209.9 453 43.9
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 5.1e-52 209.5 442 41.0
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 6.7e-52 209.1 451 42.1
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 8.7e-52 208.8 481 39.1
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 7.4e-51 205.7 452 40.9
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 9.6e-51 205.3 386 43.0
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 6.2e-50 202.6 452 38.5
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 3.1e-49 200.3 454 43.0
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.2e-48 198.4 455 38.7
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 7.6e-48 195.7 447 40.9
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.8e-47 193.4 442 41.2
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.2e-46 190.3 448 39.5
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.2e-45 188.3 455 39.3
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.9e-45 185.7 454 39.2
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.5e-43 180.6 444 40.8
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 3.3e-43 180.3 548 35.6
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.3e-43 180.3 431 37.8
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.2e-42 177.6 502 35.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 3.7e-42 176.8 457 37.9
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 3.7e-42 176.8 433 38.8
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.1e-41 173.7 408 38.2
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 9.0e-41 172.2 454 40.3
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 7.7e-40 169.1 396 40.7
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.7e-39 167.9 435 38.9
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.8e-39 166.8 445 40.2
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.9e-38 164.5 448 39.5
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.6e-37 161.4 380 40.0
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 3.6e-37 160.2 509 35.6
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 6.1e-37 159.5 445 36.9
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 7.9e-37 159.1 400 40.0
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.4e-36 158.3 191 54.5
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 5.1e-36 156.4 418 37.6
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.5e-35 154.8 458 37.6
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 2.0e-35 154.5 455 37.6
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 5.7e-35 152.9 251 45.8
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.3e-34 151.8 122 67.2
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.7e-34 151.4 450 37.1
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 2.4e-33 147.5 211 48.3
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 4.1e-33 146.7 594 31.3
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 5.9e-32 142.9 76 94.7
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.3e-31 141.7 436 36.7
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 2.2e-31 141.0 443 34.8
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 2.2e-31 141.0 437 36.8
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.9e-31 140.6 443 36.3
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 1.4e-30 138.3 413 39.7
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.2e-29 135.2 593 31.9
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 6.1e-29 132.9 403 35.7
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.9e-28 130.2 192 47.4
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 5.1e-28 129.8 130 58.5
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.2e-24 118.6 435 35.4
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 2.0e-24 117.9 409 33.7
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 6.5e-23 112.8 362 34.3
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 8.5e-23 112.5 404 33.4
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 8.5e-23 112.5 404 33.4
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.5e-22 111.7 357 37.8
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.7e-21 106.7 250 38.8
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.3e-18 98.6 338 33.7
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.8e-18 97.4 74 75.7
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.1e-17 95.5 113 49.6
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.3e-15 88.6 365 32.6
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.2e-15 87.8 175 39.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 2.6e-11 74.3 391 29.9
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.3e-10 69.3 63 58.7
VMungo0720G0679 Vigna mungo HOM05D006326 ORTHO05D007589 2.0e-08 64.7 45 73.3
AT3G56720 Arabidopsis thaliana HOM05D006326 ORTHO05D007589 1.9e-06 58.2 343 32.4


User provided reference genes

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