Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.1e-54 213.8 99 100.0
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-36 154.8 82 81.7
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.2e-35 152.1 82 79.3
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-35 151.8 82 80.5
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-34 149.1 82 79.3
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-34 149.1 82 78.0
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-34 149.1 82 80.5
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.1e-34 147.9 82 79.3
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-33 146.0 80 78.8
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.7e-33 145.2 82 78.0
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-32 143.3 82 75.6
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-32 142.9 82 76.8
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-32 142.9 83 78.3
Ca_06560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.6e-32 140.6 82 74.4
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.6e-32 140.2 79 77.2
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.5e-31 138.7 82 76.8
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-30 135.2 81 75.3
Ca_22299_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.8e-29 130.6 82 69.5
Ca_22715_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-28 128.3 80 72.5
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-27 125.9 82 70.7
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 4.1e-26 121.3 68 77.9
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.2e-26 120.2 82 67.1
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-25 119.8 62 83.9
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-23 112.8 68 75.0
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-22 109.4 56 83.9
Ca_02962_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.7e-22 107.8 77 61.0
Ca_14656_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.9e-21 103.6 56 76.8
Ca_15979_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.0e-18 94.0 56 73.2
Ca_15024_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.6e-17 91.3 48 83.3
Ca_22969_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-15 86.7 47 80.9
Ca_26973_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.5e-15 86.3 45 77.8
Ca_02091_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.6e-15 84.3 82 51.2
Ca_02558_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-14 83.2 48 81.2
Ca_07923_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-14 83.2 44 75.0
Ca_25560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-14 82.4 45 73.3
Ca_00202_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.6e-14 81.6 42 83.3
Ca_00233_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.6e-14 81.6 42 83.3
Ca_05315_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.6e-14 81.6 82 48.8
Ca_15961_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.2e-14 80.9 45 71.1
Ca_01819_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-13 80.1 45 68.9
Ca_18716_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-13 80.1 45 73.3
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-13 79.3 45 75.6
Ca_28210_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.9e-13 77.0 45 73.3
Ca_14498_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-12 76.3 38 89.5
Ca_04569_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.9e-11 72.0 82 47.6
Ca_11235_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.9e-11 72.0 46 67.4
Ca_23106_v3 Cicer arietinum L. HOM05D001478 ORTHO05D002240 4.9e-11 71.2 39 71.8
Ca_26558_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.9e-11 71.2 38 84.2
Ca_12966_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-10 69.7 42 69.0
Ca_16679_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-09 66.6 45 64.4
Ca_03093_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-09 65.9 34 85.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 2.1e-09 65.9 57 50.9
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-09 64.7 76 43.4
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 7.8e-09 63.9 64 46.9
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-08 63.5 90 40.0
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-08 63.2 85 37.6
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.3e-08 62.4 64 45.3
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.3e-08 62.4 57 47.4
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.3e-08 62.4 57 47.4
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.9e-08 61.6 79 36.7
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-08 61.6 61 47.5
TPR.G18176 Trifolium pratense HOM05D004283 ORTHO05D002183 3.9e-08 61.6 72 44.4
Ca_07803_v3 Cicer arietinum L. HOM05D000062 ORTHO05D000043 5.1e-08 61.2 33 69.7
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.1e-08 61.2 78 39.7
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-08 61.2 51 52.9
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-08 61.2 51 52.9
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-08 61.2 51 52.9
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-08 61.2 51 52.9
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.6e-08 60.8 79 36.7
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.6e-08 60.8 51 49.0
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-08 60.8 61 47.5
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 6.6e-08 60.8 53 45.3
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-08 60.5 69 42.0
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-08 60.5 79 36.7
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-08 60.5 73 38.4
Ca_19651_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.6e-08 60.5 39 61.5
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-08 60.5 78 39.7
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 8.6e-08 60.5 58 44.8
Ca_03170_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-07 60.1 36 69.4
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-07 60.1 75 37.3
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-07 60.1 78 39.7
Ca_24906_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-07 60.1 33 72.7
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-07 59.7 78 38.5
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.5e-07 59.7 59 42.4
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.5e-07 59.7 64 42.2
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-07 59.7 54 51.9
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.9e-07 59.3 79 35.4
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 1.9e-07 59.3 78 38.5
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-07 59.3 73 37.0
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-07 59.3 79 36.7
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-07 59.3 53 47.2
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-07 58.9 77 39.0
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-07 58.9 78 38.5
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-07 58.9 50 52.0
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.5e-07 58.9 66 47.0
Ca_11234_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.3e-07 58.5 35 71.4
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.3e-07 58.5 79 35.4
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 58.5 52 46.2
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 58.5 57 43.9
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 58.5 55 47.3
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.3e-07 58.2 79 35.4
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-07 58.2 78 38.5
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-07 58.2 61 47.5
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 5.6e-07 57.8 57 47.4
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.3e-07 57.4 79 35.4
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.3e-07 57.4 55 45.5
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-07 57.4 51 51.0
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 57.0 51 47.1
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 57.0 51 47.1
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 57.0 51 47.1
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 57.0 51 47.1
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 57.0 51 47.1
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-06 56.6 76 38.2
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-06 56.6 96 33.3
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.2e-06 56.6 59 42.4
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-06 56.6 51 51.0
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-06 56.2 78 37.2
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 1.6e-06 56.2 51 45.1
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-06 56.2 51 45.1
Ca_05087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-06 55.8 64 37.5
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.1e-06 55.8 48 45.8
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 2.1e-06 55.8 87 36.8
Ca_07161_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-06 55.5 42 59.5
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-06 55.5 62 43.5
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-06 55.5 84 34.5
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-06 55.5 50 46.0
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-06 55.1 76 38.2
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.6e-06 55.1 57 43.9
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-06 55.1 58 41.4
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-06 55.1 74 39.2
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-06 55.1 75 38.7
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-06 54.7 62 40.3
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-06 54.7 50 46.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-06 54.7 53 47.2
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.2e-06 54.3 56 44.6
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.2e-06 54.3 56 44.6
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-06 54.3 51 49.0
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-06 54.3 51 47.1
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.1e-06 53.9 69 37.7
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 8.1e-06 53.9 69 39.1
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-06 53.9 58 44.8
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-06 53.9 58 44.8


User provided reference genes

Program Settings