Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 5.7e-66 254.2 139 100.0
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 4.4e-34 148.3 135 68.9
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 3.0e-30 135.6 135 60.0
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 7.6e-26 120.9 125 64.8
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 6.4e-25 117.9 141 61.7
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 6.0e-23 111.3 161 53.4
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 7.8e-23 110.9 140 53.6
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.7e-22 109.8 141 51.1
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.7e-22 109.8 138 49.3
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.1e-21 107.1 133 54.9
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 2.4e-19 99.4 140 54.3
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 5.2e-19 98.2 139 49.6
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.3e-17 93.6 128 45.3
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 3.8e-17 92.0 145 43.4
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 7.1e-16 87.8 140 47.9
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 4.6e-15 85.1 133 46.6
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 6.0e-15 84.7 137 54.7
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 1.0e-14 84.0 129 53.5
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.0e-14 84.0 135 41.5
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.3e-14 83.6 135 41.5
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 1.1e-13 80.5 128 39.8
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 1.1e-13 80.5 127 48.8
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.9e-13 79.7 133 40.6
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.5e-13 79.3 127 43.3
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 3.3e-13 79.0 140 46.4
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 4.3e-13 78.6 135 40.0
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 2.8e-12 75.9 140 46.4
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 3.6e-12 75.5 139 42.4
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.6e-12 75.5 125 42.4
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 6.9e-11 71.2 162 45.1
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 9.0e-11 70.9 139 53.2
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.0e-10 69.7 122 41.0
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 4.4e-10 68.6 131 37.4
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 4.4e-10 68.6 131 37.4
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 4.4e-10 68.6 127 40.9
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 4.4e-10 68.6 127 40.9
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 4.4e-10 68.6 127 40.9
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 4.4e-10 68.6 156 41.0
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.3e-09 67.0 129 42.6
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 1.7e-09 66.6 145 32.4
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 2.2e-09 66.2 127 38.6
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 2.9e-09 65.9 143 41.3
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 8.4e-09 64.3 166 39.2
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 1.1e-08 63.9 190 31.1
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.1e-08 63.9 141 43.3
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 3.2e-08 62.4 144 36.1
Psat0s3526g0040 Pisum sativum HOM05D006722 ORTHO05D007944 4.2e-08 62.0 140 47.9
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 9.3e-08 60.8 116 38.8
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.6e-07 60.1 75 46.7
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 3.5e-07 58.9 134 35.1
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 3.5e-07 58.9 134 35.1
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 3.5e-07 58.9 134 35.1
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 6.0e-07 58.2 117 37.6
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 6.0e-07 58.2 124 40.3
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 6.0e-07 58.2 127 36.2
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 1.0e-06 57.4 134 32.1
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 1.0e-06 57.4 134 32.1
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 1.0e-06 57.4 63 52.4
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.7e-06 56.6 133 35.3
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 2.3e-06 56.2 134 32.1
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.3e-06 56.2 130 36.2
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 3.0e-06 55.8 137 34.3
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 3.0e-06 55.8 86 43.0
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 3.9e-06 55.5 128 39.1
Gohir.D01G197650 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.9e-06 55.5 117 36.8
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 3.9e-06 55.5 130 36.2
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 5.1e-06 55.1 130 33.1
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 5.1e-06 55.1 134 35.1
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 6.6e-06 54.7 136 35.3
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 8.7e-06 54.3 131 32.1
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 8.7e-06 54.3 132 31.8
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 8.7e-06 54.3 118 34.7
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 8.7e-06 54.3 132 37.9
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 8.7e-06 54.3 129 34.9


User provided reference genes

Program Settings