Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 2.0e-36 155.2 78 100.0
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 3.7e-30 134.4 77 85.7
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 1.6e-28 129.0 77 83.1
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 2.9e-27 124.8 79 84.8
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 6.5e-27 123.6 80 82.5
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 8.0e-25 116.7 79 77.2
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 1.8e-24 115.5 79 77.2
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 6.8e-24 113.6 77 74.0
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 3.4e-23 111.3 77 74.0
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 7.5e-23 110.2 78 75.6
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 9.8e-23 109.8 78 75.6
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 1.3e-22 109.4 77 71.4
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 2.8e-22 108.2 77 74.0
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 1.1e-21 106.3 77 74.0
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 1.1e-21 106.3 77 71.4
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 2.4e-21 105.1 77 70.1
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 3.1e-21 104.8 78 66.7
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 5.4e-21 104.0 77 68.8
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 5.4e-21 104.0 77 68.8
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 7.0e-21 103.6 77 68.8
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 1.2e-20 102.8 77 67.5
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 1.2e-20 102.8 77 67.5
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 1.2e-20 102.8 77 71.4
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 2.0e-20 102.1 77 67.5
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 2.7e-20 101.7 71 69.0
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 4.5e-20 100.9 72 70.8
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 5.9e-20 100.5 72 68.1
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 5.9e-20 100.5 72 68.1
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 1.0e-19 99.8 77 66.2
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 1.7e-19 99.0 77 67.5
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 1.7e-19 99.0 70 72.9
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 2.3e-19 98.6 72 69.4
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 2.9e-19 98.2 78 67.9
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 3.8e-19 97.8 76 69.7
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 64.9
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 5.0e-19 97.4 72 66.7
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 6.6e-19 97.1 77 70.1
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 8.6e-19 96.7 71 69.0
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.1e-18 96.3 77 64.9
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 1.1e-18 96.3 80 66.2
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 1.5e-18 95.9 76 68.4
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 1.9e-18 95.5 77 64.9
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 4.2e-18 94.4 59 76.3
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 4.2e-18 94.4 80 63.8
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 4.2e-18 94.4 76 71.1
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 5.5e-18 94.0 77 62.3
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 5.5e-18 94.0 80 62.5
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 9.5e-18 93.2 78 65.4
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 9.5e-18 93.2 77 59.7
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 1.2e-17 92.8 77 64.9
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 1.2e-17 92.8 80 61.2
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 1.6e-17 92.4 68 63.2
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 1.6e-17 92.4 77 62.3
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 2.1e-17 92.0 77 61.0
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 2.8e-17 91.7 57 75.4
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 2.8e-17 91.7 64 65.6
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 3.6e-17 91.3 77 58.4
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 3.6e-17 91.3 71 66.2
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 4.7e-17 90.9 85 57.6
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 4.7e-17 90.9 78 62.8
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 8.0e-17 90.1 77 66.2
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 1.4e-16 89.4 77 61.0
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 1.8e-16 89.0 77 55.8
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 2.3e-16 88.6 64 62.5
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 3.0e-16 88.2 55 72.7
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 3.0e-16 88.2 77 55.8
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 3.0e-16 88.2 55 72.7
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 3.0e-16 88.2 55 72.7
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 5.2e-16 87.4 62 66.1
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 5.2e-16 87.4 83 57.8
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 6.8e-16 87.0 61 72.1
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 6.8e-16 87.0 70 60.0
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 6.8e-16 87.0 56 76.8
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 1.2e-15 86.3 77 62.3
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 1.5e-15 85.9 77 62.3
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 2.0e-15 85.5 77 59.7
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 7.5e-15 83.6 118 45.8
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 7.5e-15 83.6 88 53.4
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 1.7e-14 82.4 98 49.0
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 2.2e-14 82.0 80 58.8
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 2.9e-14 81.6 54 70.4
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 2.9e-14 81.6 51 72.5
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 8.3e-14 80.1 51 70.6
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 1.1e-13 79.7 51 72.5
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 1.1e-13 79.7 79 57.0
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 1.8e-13 79.0 73 58.9
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 5.9e-12 73.9 119 40.3
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 7.3e-10 67.0 55 60.0
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 2.1e-09 65.5 43 72.1
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 4.7e-09 64.3 34 91.2
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 5.2e-08 60.8 40 75.0
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 9.8e-07 56.6 37 73.0


User provided reference genes

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