Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 2.0e-56 223.0 194 100.0
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 1.4e-41 173.7 101 86.1
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 6.8e-41 171.4 101 88.1
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 1.4e-38 163.7 100 85.0
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 2.0e-37 159.8 100 81.0
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 4.3e-35 152.1 100 74.0
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 6.2e-34 148.3 100 72.0
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 2.6e-32 142.9 99 71.7
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 1.7e-31 140.2 99 72.7
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 6.4e-31 138.3 92 75.0
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 6.4e-31 138.3 92 75.0
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 1.7e-28 130.2 94 67.0
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 5.1e-28 128.6 94 66.0
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 3.3e-27 125.9 94 64.9
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 1.6e-26 123.6 93 62.4
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 2.1e-26 123.2 92 60.9
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 3.6e-26 122.5 90 66.7
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 2.3e-25 119.8 92 58.7
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 3.1e-25 119.4 96 60.4
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 4.0e-25 119.0 94 64.9
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 5.2e-25 118.6 93 60.2
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 8.9e-25 117.9 88 63.6
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 3.4e-24 115.9 93 61.3
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 7.6e-24 114.8 92 56.5
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 7.6e-24 114.8 92 56.5
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 9.9e-24 114.4 94 55.3
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 1.7e-23 113.6 92 58.7
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 1.7e-23 113.6 98 55.1
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 3.8e-23 112.5 99 61.6
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.9e-23 112.1 88 62.5
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 4.9e-23 112.1 92 55.4
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 4.9e-23 112.1 92 58.7
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 6.4e-23 111.7 88 64.8
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 6.4e-23 111.7 92 58.7
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 8.4e-23 111.3 95 57.9
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 8.4e-23 111.3 94 59.6
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 8.4e-23 111.3 88 63.6
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 1.1e-22 110.9 94 59.6
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 1.4e-22 110.5 86 60.5
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 1.4e-22 110.5 90 56.7
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 1.9e-22 110.2 94 57.4
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 2.4e-22 109.8 91 60.4
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 2.4e-22 109.8 88 60.2
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 2.4e-22 109.8 97 55.7
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 3.2e-22 109.4 88 61.4
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 7.1e-22 108.2 95 60.0
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 7.1e-22 108.2 94 55.3
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 9.2e-22 107.8 88 59.1
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 9.2e-22 107.8 94 55.3
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 9.2e-22 107.8 94 53.2
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 1.6e-21 107.1 92 54.3
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 3.5e-21 105.9 92 55.4
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 2.3e-20 103.2 93 54.8
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 5.1e-20 102.1 94 53.2
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 5.1e-20 102.1 94 52.1
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 8.6e-20 101.3 94 53.2
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 1.1e-19 100.9 86 54.7
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 1.1e-19 100.9 88 53.4
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 1.5e-19 100.5 94 53.2
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 1.5e-19 100.5 88 58.0
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 2.5e-19 99.8 94 52.1
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 2.5e-19 99.8 94 54.3
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 2.5e-19 99.8 94 52.1
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 2.5e-19 99.8 94 54.3
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 3.3e-19 99.4 91 56.0
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 4.3e-19 99.0 94 52.1
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 5.6e-19 98.6 94 52.1
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 5.6e-19 98.6 94 52.1
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 7.3e-19 98.2 144 40.3
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 9.6e-19 97.8 94 48.9
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 1.6e-18 97.1 88 53.4
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 2.8e-18 96.3 93 52.7
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 3.6e-18 95.9 94 51.1
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 4.7e-18 95.5 94 51.1
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 4.7e-18 95.5 94 51.1
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 6.2e-18 95.1 95 52.6
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 6.2e-18 95.1 95 51.6
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 6.2e-18 95.1 95 51.6
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 6.2e-18 95.1 95 51.6
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 1.1e-17 94.4 87 54.0
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 1.4e-17 94.0 89 56.2
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 5.2e-17 92.0 91 53.8
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 2.0e-16 90.1 132 39.4
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 4.4e-16 89.0 119 44.5
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.3e-15 87.4 89 48.3
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 1.3e-15 87.4 124 41.1
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 4.9e-15 85.5 86 50.0
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 1.1e-14 84.3 156 34.6
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 2.4e-14 83.2 76 53.9
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 3.2e-14 82.8 95 44.2
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 4.2e-14 82.4 77 54.5
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 4.6e-13 79.0 83 50.6
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 1.0e-12 77.8 65 55.4
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 1.0e-12 77.8 143 39.2
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 1.3e-12 77.4 65 49.2
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 1.7e-12 77.0 71 53.5
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 3.9e-12 75.9 64 54.7
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 4.8e-10 68.9 65 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 6.9e-09 65.1 91 38.5
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 6.9e-09 65.1 79 40.5
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 1.2e-08 64.3 64 45.3
Pp3c17_12030 Physcomitrium patens HOM05D007207 ORTHO05D009041 2.6e-08 63.2 90 42.2
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 4.5e-08 62.4 57 52.6
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 4.5e-08 62.4 61 47.5
Zm00001eb064730 Zea mays HOM05D007207 ORTHO05D009041 7.6e-08 61.6 94 40.4
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 3.8e-07 59.3 65 41.5
VMungo0540G2184 Vigna mungo HOM05D000789 ORTHO05D000897 4.9e-07 58.9 85 36.5
Mapoly0168s0007 Marchantia polymorpha HOM05D007207 ORTHO05D009041 1.9e-06 57.0 85 40.0
Phvul.006G152300 Phaseolus vulgaris HOM05D000789 ORTHO05D000897 7.1e-06 55.1 83 36.1


User provided reference genes

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