Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-75 285.0 131 100.0
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-71 273.1 131 96.9
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.3e-71 271.6 131 96.2
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.3e-71 270.4 131 95.4
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-70 269.6 131 95.4
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-68 262.3 131 93.1
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.4e-68 261.2 131 91.6
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.5e-68 260.4 131 92.4
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-61 237.3 131 83.2
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-55 219.5 104 96.2
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 9.5e-55 216.9 105 94.3
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-53 212.6 104 93.3
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-52 209.1 102 95.1
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-50 202.6 105 87.6
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-50 202.2 100 92.0
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-50 201.8 110 84.5
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.2e-50 201.8 102 91.2
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 4.6e-41 171.4 100 78.0
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-40 169.1 91 86.8
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-34 149.4 74 91.9
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-31 139.4 146 50.0
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-29 133.3 72 80.6
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-29 131.7 64 93.8
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-28 129.8 64 89.1
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.4e-27 124.0 66 89.4
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-26 122.5 129 47.3
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-25 119.8 124 47.6
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-25 119.4 129 45.7
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-25 119.4 129 45.7
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-25 119.4 129 45.0
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.6e-25 118.2 124 48.4
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.9e-25 117.5 131 47.3
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-24 116.3 129 45.0
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-24 116.3 123 47.2
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-24 115.9 121 47.1
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.9e-24 115.2 129 45.0
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.9e-23 112.8 126 46.0
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-23 112.8 120 47.5
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.3e-23 112.1 129 44.2
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.1e-22 107.5 121 46.3
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-21 105.5 132 40.9
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-21 105.5 129 38.0
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 1.2e-20 103.6 135 38.5
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-20 101.3 129 40.3
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-19 100.5 97 49.5
Ca_05232_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 3.8e-19 98.6 55 80.0
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-19 97.8 127 39.4
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.4e-19 97.4 120 40.8
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-16 90.5 124 41.1
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-16 89.7 85 51.8
Ca_13604_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 2.3e-16 89.4 52 78.8
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.9e-16 88.6 85 50.6
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-15 86.7 125 38.4
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.3e-15 85.5 126 41.3
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.3e-15 85.1 127 38.6
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-14 83.2 126 36.5
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-14 82.8 125 40.8
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-14 82.8 127 41.7
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-14 82.8 125 40.0
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-14 82.4 100 42.0
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.8e-14 81.6 126 36.5
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.3e-14 81.3 123 38.2
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-13 80.5 116 42.2
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 1.4e-13 80.1 127 35.4
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.1e-13 79.0 115 44.3
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.9e-13 77.8 91 42.9
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.0e-13 77.4 102 41.2
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-12 77.0 84 44.0
Ca_14807_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-12 77.0 43 76.7
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-12 77.0 149 34.2
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-12 76.6 96 40.6
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-12 76.6 124 37.1
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 2.6e-12 75.9 85 44.7
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-12 75.5 67 55.2
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.6e-12 74.3 78 48.7
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-11 73.9 66 54.5
Ca_19837_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-11 73.9 64 57.8
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 2.2e-11 72.8 67 52.2
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.0e-11 71.6 74 44.6
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-10 70.5 149 31.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-10 69.7 149 32.2
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-10 69.3 76 42.1
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.2e-10 68.9 124 33.9
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.2e-10 68.6 105 40.0
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-10 68.2 67 47.8
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 5.5e-10 68.2 149 29.5
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-10 67.8 148 29.7
Ca_02962_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.1e-09 66.2 127 32.3
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-09 66.2 148 28.4
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-09 65.1 148 29.7
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 4.6e-09 65.1 148 27.7
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-09 64.7 95 40.0
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-09 64.3 79 41.8
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.0e-08 63.9 95 42.1
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-08 63.9 148 28.4
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.8e-08 63.2 132 29.5
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 2.3e-08 62.8 114 29.8
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.0e-08 62.4 67 44.8
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-08 62.4 146 30.8
Ca_15024_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.9e-08 62.0 113 33.6
Ca_22299_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.7e-08 61.2 124 32.3
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-08 61.2 148 27.0
VMungo1215G1209 Vigna mungo HOM05D000374 ORTHO05D000238 6.7e-08 61.2 118 30.5
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.7e-08 60.8 76 42.1
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-07 60.5 87 32.2
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 60.5 152 28.3
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 60.5 152 28.3
Ca_02615_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.9e-07 59.7 93 31.2
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.5e-07 59.3 99 33.3
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 2.5e-07 59.3 146 25.3
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-07 58.9 151 27.2
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 4.3e-07 58.5 107 27.1
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-07 58.5 154 29.2
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.7e-07 58.2 76 40.8
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.7e-07 58.2 131 30.5
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.7e-07 57.4 144 29.9
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 9.7e-07 57.4 144 29.9
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 9.7e-07 57.4 147 25.2
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-06 57.0 144 29.9
Ca_06560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-06 57.0 104 35.6
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-06 57.0 127 29.1
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.0 94 36.2
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-06 56.6 78 38.5
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.6e-06 56.6 131 30.5
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 2.2e-06 56.2 147 25.2
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-06 55.8 86 37.2
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-06 55.8 148 25.0
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.7e-06 55.5 63 42.9
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-06 55.5 85 35.3
vmacro12437 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 3.7e-06 55.5 91 36.3
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.8e-06 55.1 90 31.1
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 4.8e-06 55.1 90 31.1
Ca_22969_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.8e-06 55.1 70 41.4
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-06 55.1 148 27.7
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 6.3e-06 54.7 93 33.3
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 6.3e-06 54.7 93 33.3
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 6.3e-06 54.7 93 33.3
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 6.3e-06 54.7 93 33.3
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.3e-06 54.7 86 30.2
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-06 54.7 93 32.3
Ca_31358_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.2e-06 54.3 67 38.8
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-06 54.3 141 30.5


User provided reference genes

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