Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.4e-118 429.5 201 100.0
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.9e-70 269.6 216 64.4
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 2.3e-63 246.1 202 65.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 8.9e-60 234.2 184 67.9
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 3.5e-48 195.7 194 58.8
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 3.0e-47 192.6 199 53.8
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 6.6e-47 191.4 222 50.9
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 7.3e-46 188.0 190 55.3
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 8.9e-44 181.0 222 50.0
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 5.6e-30 135.2 182 45.1
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.3e-30 134.8 209 39.7
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.6e-29 132.5 209 39.2
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 6.2e-29 131.7 175 43.4
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 6.2e-29 131.7 191 42.4
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.1e-29 131.3 210 40.0
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.4e-28 130.6 207 40.6
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 6.8e-28 128.3 205 39.5
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.2e-27 127.5 181 42.5
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.5e-27 127.1 218 41.3
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.0e-27 126.7 222 37.4
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 2.6e-27 126.3 209 40.2
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 2.6e-27 126.3 205 42.0
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 9.9e-27 124.4 203 37.9
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 1.3e-26 124.0 181 46.4
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.3e-26 124.0 184 40.8
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.8e-26 122.5 184 41.8
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 6.4e-26 121.7 191 40.3
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 8.4e-26 121.3 185 42.7
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.1e-25 120.9 200 40.0
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 1.1e-25 120.9 188 44.1
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.4e-25 120.6 217 37.8
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.9e-25 120.2 213 41.8
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 7.1e-25 118.2 195 36.4
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.2e-24 117.5 194 36.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-24 117.1 195 40.0
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.1e-24 116.7 195 40.0
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 7.8e-24 114.8 191 37.7
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.0e-23 114.4 199 36.7
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.7e-23 113.6 190 38.9
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 2.3e-23 113.2 191 37.2
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 2.3e-23 113.2 204 38.7
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 3.0e-23 112.8 215 38.6
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 5.1e-23 112.1 183 36.1
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 6.6e-23 111.7 185 37.3
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 6.6e-23 111.7 202 35.6
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.5e-22 110.5 198 38.9
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.5e-22 110.5 190 41.1
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 2.5e-22 109.8 187 37.4
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 7.3e-22 108.2 188 35.1
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 9.6e-22 107.8 217 35.0
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.2e-21 107.5 200 37.5
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.6e-21 107.1 191 35.1
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.1e-21 104.8 201 37.8
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 8.1e-21 104.8 211 39.3
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 1.8e-20 103.6 190 35.3
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 2.4e-20 103.2 190 36.3
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 2.4e-20 103.2 190 36.3
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.4e-20 103.2 207 36.7
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.1e-20 102.8 191 35.6
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 3.1e-20 102.8 192 34.4
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 3.1e-20 102.8 192 34.4
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.1e-20 102.8 210 31.4
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 4.0e-20 102.4 190 36.8
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 6.9e-20 101.7 192 34.9
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 6.9e-20 101.7 188 35.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 6.9e-20 101.7 205 34.6
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 6.9e-20 101.7 204 35.8
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 6.9e-20 101.7 183 36.6
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 9.0e-20 101.3 181 37.6
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.2e-19 100.9 194 36.1
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 1.2e-19 100.9 199 32.7
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.2e-19 100.9 212 33.0
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.0e-19 100.1 204 33.8
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 3.4e-19 99.4 222 34.2
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.4e-19 99.4 194 32.5
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 3.4e-19 99.4 186 38.2
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 4.4e-19 99.0 193 34.7
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.4e-19 99.0 208 33.7
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 5.8e-19 98.6 190 35.8
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 5.8e-19 98.6 190 35.8
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 7.6e-19 98.2 198 34.3
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 9.9e-19 97.8 223 30.9
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 9.9e-19 97.8 211 35.1
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 9.9e-19 97.8 211 36.0
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.3e-18 97.4 176 36.9
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 1.3e-18 97.4 197 33.5
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.3e-18 97.4 175 36.0
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.7e-18 97.1 201 33.8
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.7e-18 97.1 201 33.8
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 2.9e-18 96.3 217 34.1
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.9e-18 96.3 210 31.0
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 4.9e-18 95.5 181 35.4
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 6.4e-18 95.1 202 33.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 6.4e-18 95.1 205 31.2
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.4e-18 94.7 211 34.1
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 8.4e-18 94.7 200 32.5
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 8.4e-18 94.7 204 30.9
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 8.4e-18 94.7 197 32.5
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.1e-17 94.4 211 34.1
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 2.4e-17 93.2 189 32.8
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.2e-17 92.4 183 37.7
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 7.1e-17 91.7 204 35.3
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-16 90.9 212 34.9
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.6e-16 90.5 227 31.3
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.1e-16 90.1 200 35.0
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 2.1e-16 90.1 180 35.6
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.1e-16 90.1 190 33.7
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 6.0e-16 88.6 177 32.2
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 3.0e-15 86.3 209 35.9
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 3.9e-15 85.9 192 32.3
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 5.1e-15 85.5 212 33.0
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 6.6e-15 85.1 206 31.1
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.1e-14 84.3 197 34.5
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 9.6e-14 81.3 201 32.3
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.4e-12 76.6 209 31.6
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.9e-12 75.1 192 30.2
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 5.8e-11 72.0 98 41.8
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.8e-11 72.0 201 29.9
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 5.8e-11 72.0 187 31.0
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 7.6e-11 71.6 179 29.1
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 2.1e-08 63.5 204 27.9
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.1e-08 63.5 111 36.0
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 4.6e-08 62.4 216 26.4
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 5.1e-07 58.9 184 28.3
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.5e-06 57.4 166 27.1
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.3e-06 55.8 52 48.1


User provided reference genes

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