Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 6.0e-74 280.8 146 100.0
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 6.4e-60 234.2 147 85.0
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 3.5e-58 228.4 147 83.0
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 9.0e-54 213.8 141 80.1
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.1e-46 190.3 149 71.1
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 9.0e-46 187.2 138 73.2
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 3.4e-45 185.3 138 72.5
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 3.4e-45 185.3 138 72.5
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 4.5e-45 184.9 139 71.9
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 4.5e-45 184.9 139 71.9
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.3e-44 183.3 132 74.2
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 1.7e-44 183.0 138 71.7
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.8e-44 181.8 130 73.8
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 4.9e-44 181.4 144 72.2
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 6.5e-44 181.0 122 79.5
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 6.5e-44 181.0 141 72.3
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 8.4e-44 180.6 149 68.5
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.1e-43 180.3 140 69.3
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.1e-43 180.3 119 80.7
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 3.2e-43 178.7 140 68.6
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.2e-43 178.7 144 69.4
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 3.2e-43 178.7 141 68.1
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.2e-43 178.3 119 81.5
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 4.2e-43 178.3 138 74.6
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 4.2e-43 178.3 144 70.8
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.2e-43 178.3 144 69.4
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 4.2e-43 178.3 144 69.4
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 4.2e-43 178.3 141 68.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 5.5e-43 177.9 143 70.6
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 7.1e-43 177.6 138 73.9
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 7.1e-43 177.6 138 73.9
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 9.3e-43 177.2 139 67.6
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 9.3e-43 177.2 119 80.7
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 1.2e-42 176.8 121 76.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 1.6e-42 176.4 124 75.8
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 2.1e-42 176.0 149 67.1
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.1e-42 176.0 139 69.8
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 2.1e-42 176.0 155 64.5
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.7e-42 175.6 134 70.9
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.7e-42 175.6 134 70.9
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 2.7e-42 175.6 154 67.5
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 3.5e-42 175.3 139 71.2
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 3.5e-42 175.3 119 78.2
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.5e-42 175.3 120 78.3
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 4.6e-42 174.9 143 67.1
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 6.0e-42 174.5 138 69.6
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 6.0e-42 174.5 120 77.5
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 7.9e-42 174.1 117 79.5
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 7.9e-42 174.1 129 73.6
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.3e-41 173.3 154 66.9
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.8e-41 172.9 122 77.0
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.8e-41 172.9 120 75.8
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.8e-41 172.9 117 76.9
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 2.3e-41 172.6 118 79.7
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 3.0e-41 172.2 118 78.0
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.0e-41 172.2 120 75.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 3.0e-41 172.2 145 67.6
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.0e-41 172.2 121 77.7
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 3.9e-41 171.8 119 76.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 3.9e-41 171.8 148 64.2
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.9e-41 171.8 141 68.8
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.9e-41 171.8 114 78.1
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 3.9e-41 171.8 152 66.4
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 5.1e-41 171.4 120 75.8
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 6.7e-41 171.0 130 73.8
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 6.7e-41 171.0 152 66.4
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 6.7e-41 171.0 147 63.9
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 6.7e-41 171.0 132 68.9
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 8.7e-41 170.6 149 65.8
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 8.7e-41 170.6 147 68.7
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 8.7e-41 170.6 113 77.9
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.1e-40 170.2 147 63.3
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.9e-40 169.5 122 75.4
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.9e-40 169.5 123 74.0
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.5e-40 169.1 129 72.9
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.5e-40 169.1 150 66.7
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 3.3e-40 168.7 122 70.5
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 3.3e-40 168.7 128 73.4
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 3.3e-40 168.7 116 78.4
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 7.4e-40 167.5 149 63.8
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 7.4e-40 167.5 149 64.4
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 7.4e-40 167.5 118 76.3
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.3e-39 166.8 135 68.9
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 1.3e-39 166.8 152 64.5
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.2e-39 166.0 147 63.3
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 2.8e-39 165.6 154 65.6
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 2.8e-39 165.6 120 76.7
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 4.8e-39 164.9 121 73.6
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 4.8e-39 164.9 120 77.5
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 6.3e-39 164.5 149 61.7
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.1e-38 163.7 136 68.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.4e-38 163.3 140 66.4
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.4e-38 163.3 118 72.9
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 2.4e-38 162.5 143 66.4
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.4e-38 162.5 149 65.1
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.4e-38 162.5 144 65.3
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 4.1e-38 161.8 143 62.9
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 5.3e-38 161.4 150 65.3
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 6.9e-38 161.0 121 68.6
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 2.6e-37 159.1 127 67.7
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 4.5e-37 158.3 129 66.7
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 2.2e-36 156.0 141 63.1
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 6.5e-36 154.5 78 97.4
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.1e-35 153.7 115 72.2
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 1.1e-35 153.7 153 55.6
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 1.1e-35 153.7 115 73.9
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.9e-35 152.9 152 61.8
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.6e-34 149.8 152 57.2
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 4.6e-34 148.3 78 93.6
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 6.1e-34 147.9 124 66.1
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 6.7e-33 144.4 150 54.0
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 6.7e-33 144.4 139 55.4
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 4.3e-32 141.7 86 79.1
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 2.2e-31 139.4 109 69.7
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 2.2e-31 139.4 116 69.0
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.4e-30 136.7 75 85.3
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 3.0e-25 119.0 116 57.8
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 3.9e-25 118.6 106 63.2
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.6e-24 115.9 107 64.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 8.2e-23 110.9 92 64.1
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 8.2e-23 110.9 116 56.9
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 3.1e-22 109.0 124 52.4
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 2.0e-21 106.3 75 66.7
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 1.7e-20 103.2 78 66.7
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 1.1e-16 90.5 77 57.1
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 4.4e-16 88.6 134 42.5
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 2.6e-08 62.8 36 88.9
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 1.4e-06 57.0 65 46.2


User provided reference genes

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