Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 7.8e-138 493.8 254 100.0
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 4.3e-104 381.7 257 78.6
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 4.3e-104 381.7 257 78.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.8e-84 315.5 246 70.3
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.7e-82 309.3 255 67.1
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 4.4e-80 302.0 255 65.9
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 5.7e-80 301.6 256 64.8
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.0e-77 293.1 256 64.8
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 8.0e-74 281.2 267 62.2
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 5.7e-64 248.4 270 50.4
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 9.8e-64 247.7 270 51.5
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.2e-63 246.5 264 52.3
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.7e-61 239.6 250 52.8
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 4.5e-61 238.8 264 49.2
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 4.5e-61 238.8 264 49.2
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 7.7e-61 238.0 266 49.6
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.7e-60 236.9 271 46.9
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.7e-60 236.9 273 49.1
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.3e-60 236.5 263 51.0
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 2.9e-60 236.1 264 50.0
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.8e-60 235.7 270 48.5
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.3e-59 232.6 270 47.8
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.3e-59 232.3 272 47.8
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 7.3e-59 231.5 253 53.8
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.8e-58 229.6 239 52.3
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 6.1e-58 228.4 268 48.1
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.0e-57 227.6 270 48.5
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.4e-57 227.3 271 48.7
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.8e-57 226.9 270 47.4
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 3.0e-57 226.1 267 46.4
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.0e-57 226.1 270 47.8
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.0e-57 226.1 238 53.4
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 3.0e-57 226.1 271 48.7
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 5.2e-57 225.3 277 50.9
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.0e-56 223.4 270 48.1
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.6e-56 223.0 268 47.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.6e-56 223.0 267 47.6
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 4.4e-56 222.2 271 46.5
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.7e-55 220.3 270 49.6
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.7e-55 220.3 254 50.4
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 2.2e-55 219.9 257 49.8
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.9e-55 219.5 246 50.4
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.9e-55 219.5 264 46.2
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 3.7e-55 219.2 270 47.8
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 4.9e-55 218.8 270 48.1
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 6.4e-55 218.4 270 49.6
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 6.4e-55 218.4 270 48.1
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 8.3e-55 218.0 277 48.7
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 8.3e-55 218.0 267 47.2
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 8.3e-55 218.0 267 47.2
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 8.3e-55 218.0 266 50.0
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.1e-54 217.6 267 47.6
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.1e-54 217.6 272 48.2
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.4e-54 217.2 250 50.4
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.4e-54 217.2 272 47.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 3.2e-54 216.1 267 47.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 5.4e-54 215.3 262 50.0
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 5.4e-54 215.3 266 48.5
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 7.0e-54 214.9 267 46.1
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 9.2e-54 214.5 241 53.5
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 9.2e-54 214.5 268 49.3
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.2e-53 214.2 267 47.2
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.7e-53 213.0 268 47.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 4.6e-53 212.2 265 46.8
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.0e-52 211.1 272 47.4
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.0e-52 209.5 246 47.6
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 5.0e-52 208.8 248 48.8
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.1e-51 207.6 268 44.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.5e-51 207.2 271 46.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 2.8e-50 203.0 269 46.5
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 4.7e-50 202.2 267 45.3
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 8.0e-50 201.4 258 46.9
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 8.0e-50 201.4 268 46.3
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 8.0e-50 201.4 268 46.3
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.3e-49 199.9 267 46.1
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 2.3e-49 199.9 272 47.1
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 2.3e-49 199.9 272 47.1
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.1e-49 199.5 274 46.7
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.1e-49 199.5 274 46.7
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.5e-48 197.2 267 43.8
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.5e-48 197.2 269 45.4
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 3.4e-48 196.1 270 44.1
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.4e-48 195.7 270 44.8
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 7.5e-48 194.9 270 43.7
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.7e-47 193.7 270 44.4
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.7e-47 193.7 265 43.8
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 2.2e-47 193.4 272 44.1
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 2.2e-47 193.4 270 44.8
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 2.2e-47 193.4 250 46.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 6.4e-47 191.8 265 44.2
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 4.1e-46 189.1 257 44.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.2e-45 187.6 254 44.5
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 1.6e-45 187.2 216 49.1
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.6e-45 187.2 119 79.0
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.2e-40 171.0 272 41.9
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 4.4e-40 169.1 272 41.9
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.8e-40 168.7 231 47.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 9.8e-40 167.9 214 44.4
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.0e-36 157.9 196 45.4
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 2.3e-36 156.8 237 45.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 5.1e-36 155.6 267 37.5
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 8.6e-36 154.8 267 37.8
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 7.3e-35 151.8 232 41.4
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.6e-34 150.6 110 73.6
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 3.1e-33 146.4 246 40.7
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 3.8e-31 139.4 206 43.2
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.9e-28 129.4 211 43.6
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 8.6e-28 128.3 223 39.0
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.1e-27 127.9 192 40.6
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-27 127.1 192 40.6
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 5.4e-22 109.0 149 39.6
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 4.6e-21 105.9 237 32.9
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 3.1e-17 93.2 222 32.4
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.0e-17 92.8 90 58.9
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 2.9e-15 86.7 105 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 6.4e-15 85.5 221 33.0
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.3e-12 77.8 242 30.6
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 2.4e-09 67.0 72 45.8
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 5.8e-08 62.4 84 46.4


User provided reference genes

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