Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05090_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 3.7e-42 174.5 90 100.0
Ca_14995_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 3.7e-42 174.5 90 100.0
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 3.9e-31 137.9 86 81.4
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 7.3e-30 133.7 86 77.9
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 2.8e-29 131.7 86 76.7
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 4.4e-27 124.4 86 72.1
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.5e-22 109.4 89 65.2
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 1.5e-22 109.4 86 67.4
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 6.2e-21 104.0 86 64.0
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 3.1e-20 101.7 86 66.3
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 1.3e-18 96.3 86 64.0
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 2.8e-13 78.6 88 50.0
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 4.7e-13 77.8 86 48.8
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 6.2e-13 77.4 86 50.0
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 1.8e-12 75.9 86 51.2
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 2.4e-12 75.5 86 48.8
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 6.9e-12 73.9 86 48.8
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 9.0e-12 73.6 86 48.8
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 1.5e-11 72.8 87 48.3
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 1.5e-11 72.8 86 45.3
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 4.4e-11 71.2 86 47.7
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 4.4e-11 71.2 86 44.2
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 7.6e-11 70.5 89 42.7
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 1.3e-10 69.7 89 43.8
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 2.9e-10 68.6 86 48.8
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 4.9e-10 67.8 87 46.0
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 1.1e-09 66.6 86 45.3
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 1.1e-09 66.6 86 43.0
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 1.9e-09 65.9 86 41.9
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 2.4e-09 65.5 86 39.5
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 5.4e-09 64.3 86 44.2
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 5.4e-09 64.3 86 43.0
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 1.6e-08 62.8 86 44.2
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 2.1e-08 62.4 89 40.4
TPR.G14892 Trifolium pratense HOM05D007204 ORTHO05D008593 2.1e-08 62.4 44 75.0
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 3.5e-08 61.6 87 43.7
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 3.5e-08 61.6 87 43.7
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 6.0e-08 60.8 89 39.3
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 1.3e-07 59.7 85 42.4
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 1.7e-07 59.3 86 41.9
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 3.0e-07 58.5 89 38.2
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 3.0e-07 58.5 87 37.9
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 3.0e-07 58.5 89 42.7
TPR.G444 Trifolium pratense HOM05D007204 ORTHO05D008593 3.0e-07 58.5 35 77.1
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 3.9e-07 58.2 85 41.2
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 3.9e-07 58.2 86 34.9
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 5.1e-07 57.8 86 38.4
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 5.1e-07 57.8 85 41.2
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 5.1e-07 57.8 101 39.6
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 5.1e-07 57.8 101 35.6
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 8.7e-07 57.0 37 75.7
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 1.5e-06 56.2 87 40.2
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 1.5e-06 56.2 86 36.0
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 1.9e-06 55.8 50 52.0
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 2.5e-06 55.5 85 40.0
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 3.3e-06 55.1 86 41.9
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 3.3e-06 55.1 86 40.7
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 3.3e-06 55.1 86 36.0
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 5.6e-06 54.3 99 39.4
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 7.3e-06 53.9 99 37.4
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 9.6e-06 53.5 48 60.4


User provided reference genes

Program Settings