Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05078_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-76 287.7 139 100.0
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.1e-48 194.9 183 59.0
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.2e-48 193.7 183 57.9
Ca_08864_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.5e-47 191.8 168 61.3
Ca_19142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.9e-46 188.3 188 55.9
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-46 187.2 167 59.3
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.6e-46 187.2 173 59.5
Ca_16224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-44 181.4 164 59.1
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-43 180.3 156 60.9
Ca_06652_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-43 179.5 208 50.5
Ca_07670_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.8e-43 179.5 199 52.8
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.8e-43 179.5 199 52.8
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-43 179.5 199 52.8
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-43 178.3 147 63.9
Ca_25324_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-42 176.0 199 51.8
Ca_25379_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-42 174.5 159 57.9
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.5e-42 174.1 198 53.0
Ca_14010_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.5e-42 174.1 199 51.8
Ca_07112_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-41 171.0 181 53.0
Ca_16342_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-41 171.0 112 73.2
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 4.1e-40 168.3 199 50.3
Ca_02550_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.4e-40 167.9 172 54.1
Ca_00367_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-38 160.6 166 56.0
Ca_11857_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-38 160.6 161 57.8
Ca_18100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-35 153.3 168 51.8
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.2e-35 151.4 108 71.3
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.9e-35 150.6 108 71.3
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.9e-35 150.6 81 87.7
Ca_26220_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-34 150.2 126 62.7
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-34 149.4 86 83.7
Ca_14009_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-34 149.4 108 69.4
Ca_19621_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-34 149.4 110 70.0
Ca_23376_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-34 149.1 108 70.4
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.4e-34 148.3 108 69.4
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-34 147.9 108 69.4
Ca_18938_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.5e-34 147.5 108 69.4
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-33 146.4 108 69.4
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-33 145.6 81 85.2
Ca_04284_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.3e-33 144.1 108 69.4
Ca_19454_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-32 142.5 125 59.2
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.2e-32 142.1 108 66.7
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.2e-32 142.1 81 81.5
Ca_19099_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.0e-31 137.9 130 58.5
Ca_07479_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-30 136.7 77 83.1
Ca_25380_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-30 136.0 81 76.5
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.1e-30 134.8 73 87.7
Ca_30516_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-29 130.6 150 50.0
Ca_01934_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-28 129.8 133 57.1
Ca_03231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.6e-28 129.8 105 65.7
Ca_03206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.7e-28 128.3 80 80.0
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.6e-26 120.9 100 62.0
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-25 119.8 145 49.0
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.4e-25 117.5 86 70.9
Ca_03914_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.1e-24 114.4 119 52.1
Ca_26980_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-23 113.6 123 50.4
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-22 110.5 68 76.5
Ca_26166_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-22 110.5 180 40.6
Ca_12569_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-22 109.0 151 45.0
Ca_07338_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.6e-22 107.8 110 53.6
Ca_27794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-21 105.1 93 60.2
Ca_04890_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.6e-21 104.0 69 72.5
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.6e-21 104.0 141 45.4
Ca_12204_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-20 101.7 101 58.4
Ca_14675_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.1e-20 100.9 158 41.8
Ca_13619_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.9e-19 97.4 59 79.7
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-16 90.5 123 47.2
Ca_01915_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-16 89.4 60 76.7
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-15 85.1 108 47.2
Ca_18224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.6e-15 85.1 52 78.8
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-14 83.2 66 63.6
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-13 80.1 46 84.8
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 3.3e-13 79.0 81 48.1
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-12 75.9 79 49.4
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-12 75.9 103 38.8
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-12 75.1 97 45.4
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-11 73.9 100 43.0
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-11 73.6 40 85.0
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-11 73.6 108 40.7
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-11 73.6 100 41.0
Ca_03093_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.1e-11 72.4 84 42.9
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 3.1e-11 72.4 80 47.5
Lj6C647G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-11 71.2 126 35.7
Ca_24294_v3 Cicer arietinum L. HOM05D024801 ORTHO05D002183 9.0e-11 70.9 142 32.4
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-10 70.1 70 54.3
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-10 68.9 97 39.2
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-10 68.6 97 41.2
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-10 67.8 97 42.3
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-10 67.4 97 40.2
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 67.0 97 39.2
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-09 66.2 96 40.6
Hma1.2p1_0622F.1_g190860 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.9e-09 65.9 131 32.1
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 2.9e-09 65.9 82 45.1
TPR.G6871 Trifolium pratense HOM05D000176 ORTHO05D000106 2.9e-09 65.9 80 43.8
Ca_14143_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-09 65.5 39 76.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-09 65.5 120 35.8
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-09 65.5 97 41.2
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-09 65.5 97 40.2
Ca_15142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.9e-09 65.1 42 71.4
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.9e-09 65.1 80 41.2
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.4e-09 64.7 79 41.8
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-09 64.7 93 40.9
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-09 64.7 93 40.9
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.4e-09 64.3 79 41.8
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-09 64.3 93 39.8
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 8.4e-09 64.3 84 40.5
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.1e-08 63.9 112 37.5
Hma1.2p1_0353F.1_g133150 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.1e-08 63.9 79 41.8
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 63.9 93 40.9
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 63.9 97 40.2
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.4e-08 63.5 79 41.8
Lj1C694T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-08 63.5 87 39.1
Lj4P278T38 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-08 63.5 82 42.7
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-08 63.5 117 35.0
TPR.G39416 Trifolium pratense HOM05D000176 ORTHO05D001565 1.4e-08 63.5 80 40.0
Ca_25183_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.9e-08 63.2 48 60.4
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-08 62.8 42 71.4
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 62.8 82 42.7
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-08 62.4 84 38.1
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 3.2e-08 62.4 84 36.9
Lj4C435T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-08 62.4 96 38.5
TPR.G36336 Trifolium pratense HOM05D000176 ORTHO05D000106 4.2e-08 62.0 82 41.5
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-08 61.6 130 29.2
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 5.4e-08 61.6 84 38.1
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-08 61.6 124 33.9
Lj2C486T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-08 61.6 97 37.1
TPR.G1754 Trifolium pratense HOM05D012393 ORTHO05D014595 5.4e-08 61.6 85 40.0
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-08 61.2 124 33.9
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.3e-08 60.8 84 38.1
Ca_20172_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.3e-08 60.8 42 69.0
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.2e-07 60.5 81 39.5
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.5 118 33.1
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.5 97 38.1
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.6e-07 60.1 131 29.0
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-07 60.1 68 44.1
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-07 60.1 127 33.1
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-07 60.1 124 33.9
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 59.7 89 40.4
TPR.G29768 Trifolium pratense HOM05D001453 ORTHO05D000106 2.1e-07 59.7 82 36.6
Lj4C246G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-07 59.3 98 35.7
Ca_02919_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.5e-07 58.9 78 38.5
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.6e-07 58.5 137 27.7
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-07 58.2 120 35.8
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 6.0e-07 58.2 114 36.0
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-07 57.8 89 37.1
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-06 57.4 124 34.7
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.0 116 35.3
CSS0042022 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.7e-06 56.6 81 37.0
Aqoxy4G01131 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.3e-06 56.2 97 39.2
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-06 56.2 65 44.6
Lju170C10G7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 56.2 89 39.3
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 3.0e-06 55.8 80 35.0
Ca_24180_v3 Cicer arietinum L. HOM05D036213 ORTHO05D002183 3.9e-06 55.5 36 72.2
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.1e-06 55.1 60 46.7
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.6e-06 54.7 75 38.7
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-06 54.7 97 36.1
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-06 54.7 102 34.3
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-06 54.7 85 37.6
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 6.6e-06 54.7 80 33.8
Aa31sc83G70 Aethionema arabicum HOM05D000176 ORTHO05D000106 8.7e-06 54.3 78 41.0
Hma1.2p1_0627F.1_g191720 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.7e-06 54.3 79 36.7
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 8.7e-06 54.3 73 39.7
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-06 54.3 115 34.8
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 8.7e-06 54.3 78 43.6


User provided reference genes

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