Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 3.7e-91 338.2 169 100.0
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 3.8e-56 221.9 171 69.6
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.8e-48 195.3 139 67.6
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 8.8e-45 184.1 143 64.3
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.5e-44 183.3 175 57.7
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.5e-44 183.3 142 62.7
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 3.4e-44 182.2 174 58.6
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 4.8e-43 178.3 137 65.0
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 6.3e-43 177.9 157 65.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 7.0e-42 174.5 144 59.0
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 9.1e-42 174.1 165 57.0
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 1.0e-40 170.6 114 72.8
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.1e-39 167.2 132 62.1
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.9e-39 166.4 142 61.3
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 2.5e-39 166.0 125 66.4
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 5.5e-39 164.9 108 70.4
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 9.5e-39 164.1 158 56.3
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.2e-38 163.7 140 61.4
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.2e-38 163.7 130 63.1
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.6e-38 163.3 142 60.6
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.8e-38 162.5 136 58.8
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.7e-38 161.8 137 59.9
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 4.7e-38 161.8 97 75.3
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 4.7e-38 161.8 153 56.9
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 4.7e-38 161.8 106 71.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.0e-37 160.6 146 56.8
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.4e-37 160.2 154 56.5
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.4e-37 160.2 138 58.7
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.4e-37 160.2 93 74.2
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.4e-37 160.2 157 54.8
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.4e-37 160.2 130 61.5
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-37 160.2 140 60.0
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.4e-37 160.2 81 84.0
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 1.4e-37 160.2 130 59.2
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.8e-37 159.8 142 59.9
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.8e-37 159.8 151 55.0
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 2.3e-37 159.5 142 58.5
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.3e-37 159.5 161 53.4
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 3.0e-37 159.1 139 59.0
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.0e-37 159.1 154 55.2
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 5.2e-37 158.3 160 53.8
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 5.2e-37 158.3 124 64.5
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.2e-36 157.1 100 69.0
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.5e-36 156.8 165 52.1
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 2.0e-36 156.4 142 56.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.0e-36 156.4 130 60.8
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.0e-36 156.4 148 57.4
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 2.0e-36 156.4 89 76.4
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 3.4e-36 155.6 157 52.2
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.4e-36 155.6 80 82.5
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 5.7e-36 154.8 140 55.0
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 5.7e-36 154.8 149 55.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 5.7e-36 154.8 101 68.3
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.3e-35 153.7 101 69.3
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.7e-35 153.3 155 52.9
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 4.9e-35 151.8 90 73.3
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 4.9e-35 151.8 96 69.8
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 8.3e-35 151.0 90 75.6
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.8e-34 149.8 76 84.2
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.4e-34 149.4 110 63.6
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 3.1e-34 149.1 127 56.7
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 4.1e-34 148.7 136 55.9
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 7.0e-34 147.9 82 78.0
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.6e-33 146.7 81 75.3
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.6e-33 146.7 90 71.1
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 3.5e-33 145.6 101 68.3
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.5e-33 145.2 134 56.7
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 4.5e-33 145.2 78 78.2
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 7.8e-33 144.4 76 80.3
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.3e-32 143.7 132 56.8
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 3.9e-32 142.1 89 68.5
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.1e-31 140.6 120 59.2
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.5e-31 140.2 108 59.3
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 4.3e-31 138.7 99 60.6
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 5.6e-31 138.3 80 72.5
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.6e-30 136.7 134 55.2
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.8e-30 136.0 94 67.0
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 4.7e-30 135.2 129 57.4
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 6.1e-30 134.8 72 77.8
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 8.0e-30 134.4 138 52.2
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.0e-29 134.0 87 66.7
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 1.0e-29 134.0 93 63.4
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.4e-29 133.7 92 67.4
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.8e-29 133.3 66 81.8
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 3.1e-29 132.5 66 83.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.6e-28 129.4 128 59.4
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 7.5e-28 127.9 65 83.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 9.8e-28 127.5 106 67.0
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 2.2e-27 126.3 67 82.1
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 8.3e-27 124.4 69 78.3
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 3.2e-26 122.5 83 67.5
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 5.4e-26 121.7 120 51.7
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 9.2e-26 120.9 59 84.7
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 4.6e-25 118.6 167 44.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.3e-24 117.1 73 71.2
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 3.3e-23 112.5 72 59.7
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.1e-21 107.5 74 64.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.5e-20 103.6 65 69.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.4e-18 97.1 69 65.2
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 7.0e-18 94.7 63 57.1
Psat7g235560 Pisum sativum HOM05D007483 ORTHO05D009133 3.1e-13 79.3 85 56.5
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 3.3e-07 59.3 37 67.6


User provided reference genes

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