Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1390.6 697 100.0
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1297.0 652 100.0
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1297.0 652 100.0
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1262.7 652 98.0
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 0.0e+00 1130.5 652 86.7
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 0.0e+00 1113.6 652 86.8
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 0.0e+00 1095.9 652 83.7
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 2.7e-297 1025.0 657 79.0
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 4.9e-291 1004.2 653 78.9
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 1.3e-288 996.1 655 77.4
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 3.8e-283 978.0 653 74.7
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 4.0e-277 958.0 655 75.1
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 1.7e-275 952.6 653 74.7
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 6.4e-275 950.7 653 74.9
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 2.7e-233 812.4 659 64.3
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 8.8e-232 807.4 656 64.6
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 6.5e-227 791.2 659 62.5
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.9e-226 789.6 659 62.7
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 5.5e-226 788.1 665 60.3
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 3.3e-223 778.9 657 62.1
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 5.3e-221 771.5 655 62.9
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 7.7e-220 767.7 655 61.4
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 1.3e-219 766.9 659 61.6
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 2.2e-219 766.1 656 61.0
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 6.5e-219 764.6 659 61.5
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.5e-218 763.5 657 61.6
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 1.5e-218 763.5 659 59.9
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 1.9e-218 763.1 658 60.6
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 1.6e-217 760.0 657 60.6
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 2.7e-217 759.2 657 60.6
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 1.4e-216 756.9 658 61.1
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 1.5e-215 753.4 661 61.0
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 4.4e-215 751.9 657 60.3
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 1.7e-214 750.0 657 58.9
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 2.2e-214 749.6 680 57.8
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.2e-212 743.8 656 59.3
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 1.2e-212 743.8 656 58.2
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 7.7e-212 741.1 657 61.0
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 1.0e-211 740.7 658 58.7
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 1.9e-210 736.5 656 59.3
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 1.9e-210 736.5 659 59.2
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 9.5e-210 734.2 660 58.6
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 1.6e-209 733.4 658 59.1
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 1.6e-209 733.4 737 56.6
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 1.0e-208 730.7 657 58.1
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 1.4e-208 730.3 659 59.2
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 6.8e-208 728.0 657 57.4
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 7.5e-207 724.5 632 59.7
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 1.4e-205 720.3 658 58.7
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 8.6e-203 711.1 655 56.6
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 4.3e-202 708.8 656 57.3
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 8.9e-200 701.0 657 56.8
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 2.6e-199 699.5 655 57.7
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 1.8e-197 693.3 657 56.3
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 1.0e-195 687.6 716 52.9
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 1.3e-195 687.2 658 56.1
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 5.6e-194 681.8 660 55.3
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 2.3e-192 676.4 656 55.8
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 1.2e-191 674.1 660 55.5
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 1.2e-191 674.1 659 56.4
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 9.8e-191 671.0 632 56.6
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 1.3e-190 670.6 658 54.1
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 3.2e-189 666.0 659 54.9
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 5.4e-189 665.2 656 55.6
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 7.8e-188 661.4 662 53.8
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 7.8e-188 661.4 662 53.8
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 1.0e-187 661.0 657 54.0
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 2.3e-187 659.8 656 54.9
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 4.3e-186 655.6 661 54.2
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 4.3e-186 655.6 656 54.4
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 9.5e-186 654.4 661 53.9
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 2.1e-185 653.3 657 54.5
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 2.3e-184 649.8 656 54.3
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 6.8e-184 648.3 659 53.9
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 6.8e-184 648.3 659 53.9
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.5e-183 647.1 657 53.6
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 1.5e-183 647.1 663 54.0
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 1.4e-181 640.6 661 54.0
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 2.1e-180 636.7 656 53.2
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 1.3e-179 634.0 663 53.2
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 3.3e-178 629.4 689 51.2
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 9.9e-175 617.8 655 51.9
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 4.9e-174 615.5 634 53.0
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 5.1e-171 605.5 659 50.2
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 1.9e-170 603.6 660 51.5
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 5.6e-170 602.1 659 50.5
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 7.3e-170 601.7 660 53.0
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 7.3e-170 601.7 492 63.8
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 9.9e-167 591.3 657 50.1
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 9.3e-165 584.7 657 50.7
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.2e-164 584.3 657 48.1
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 3.8e-158 562.8 660 49.2
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 1.8e-155 553.9 657 47.5
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 5.9e-135 485.7 640 43.6
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 3.4e-119 433.3 463 49.0
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 1.2e-116 424.9 294 72.8
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 5.3e-112 409.5 432 53.7
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 3.3e-106 390.2 393 54.5
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 2.5e-101 374.0 658 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 4.2e-101 373.2 661 37.2
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 7.2e-101 372.5 379 51.2
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 6.1e-100 369.4 670 34.9
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 7.5e-90 335.9 642 35.2
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 7.5e-90 335.9 642 35.2
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 3.6e-76 290.4 257 58.0
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 1.3e-62 245.4 609 28.9
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 3.2e-24 117.9 314 29.0
Actinidia04194 Actinidia chinensis HOM05D006302 ORTHO05D007960 2.5e-08 65.1 70 48.6
Medtr6g074790 Medicago truncatula HOM05D006302 ORTHO05D007960 7.9e-07 60.1 46 67.4


User provided reference genes

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