Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04979_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 9.7e-46 186.4 92 100.0
Ca_09297_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 3.7e-29 131.3 78 83.3
Ca_19755_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 1.6e-27 125.9 88 72.7
Psat3g013080 Pisum sativum HOM05D002981 ORTHO05D003725 9.4e-25 116.7 78 70.5
TPR.G1663 Trifolium pratense HOM05D002981 ORTHO05D003725 3.6e-24 114.8 78 70.5
Medtr7g112040 Medicago truncatula HOM05D002981 ORTHO05D003725 4.0e-23 111.3 78 69.2
Aqoxy2G02802 Aquilegia oxysepala HOM05D002981 ORTHO05D003725 2.6e-22 108.6 76 65.8
Dinv24424 Davidia involucrata HOM05D002981 ORTHO05D003725 3.4e-22 108.2 76 67.1
Dinv30871 Davidia involucrata HOM05D002981 ORTHO05D003725 9.8e-22 106.7 78 67.9
Glyma.03G232000 Glycine max HOM05D002981 ORTHO05D003725 1.3e-21 106.3 78 67.9
Lj5A337G17 Lonicera japonica HOM05D002981 ORTHO05D003725 1.3e-21 106.3 75 65.3
Lj1g0022270 Lotus japonicus HOM05D002981 ORTHO05D003725 1.3e-21 106.3 79 65.8
CSS0028783 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 2.2e-21 105.5 75 66.7
Nn3g21634 Nelumbo nucifera HOM05D002981 ORTHO05D003725 2.8e-21 105.1 75 68.0
VMungo1383G3526 Vigna mungo HOM05D002981 ORTHO05D003725 3.7e-21 104.8 78 66.7
Glyma.19G229000 Glycine max HOM05D002981 ORTHO05D003725 4.8e-21 104.4 78 66.7
EL10Ac4g09830 Beta vulgaris HOM05D002981 ORTHO05D003725 6.3e-21 104.0 78 64.1
Gohir.A12G126400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 6.3e-21 104.0 78 65.4
Lj9C217G8 Lonicera japonica HOM05D002981 ORTHO05D003725 1.1e-20 103.2 78 65.4
TWI75G0141 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 1.1e-20 103.2 78 64.1
Duzib138G0226 Durio zibethinus HOM05D002981 ORTHO05D003725 1.4e-20 102.8 78 65.4
Phvul.001G225600 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 1.4e-20 102.8 78 65.4
SalBow3G0105 Salvia bowleyana HOM05D002981 ORTHO05D003725 1.4e-20 102.8 77 62.3
TAR362G0641 Trochodendron aralioides HOM05D002981 ORTHO05D003725 1.4e-20 102.8 78 65.4
GSVIVG01031219001 Vitis vinifera HOM05D002981 ORTHO05D003725 1.4e-20 102.8 78 64.1
Ah.06g188900 Amaranthus hybridus HOM05D002981 ORTHO05D003725 1.8e-20 102.4 76 60.5
Gorai.008G141100 Gossypium raimondii HOM05D002981 ORTHO05D003725 1.8e-20 102.4 78 64.1
TWI18G0728 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 1.8e-20 102.4 78 64.1
VMungo0647G1826 Vigna mungo HOM05D002981 ORTHO05D003725 1.8e-20 102.4 78 64.1
SGA_v2.0_scaffold81G26125 Striga asiatica HOM05D002981 ORTHO05D003725 2.4e-20 102.1 76 61.8
Gohir.A08G118600 Gossypium hirsutum HOM05D002981 ORTHO05D003725 3.1e-20 101.7 78 64.1
Gohir.D08G139400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 3.1e-20 101.7 78 64.1
Manes.09G175600 Manihot esculenta HOM05D002981 ORTHO05D003725 3.1e-20 101.7 76 60.5
DCAR_029360 Daucus carota HOM05D002981 ORTHO05D003725 4.1e-20 101.3 75 64.0
Hma1.2p1_0008F-1.1_g005760 Hydrangea macrophylla HOM05D002981 ORTHO05D003725 4.1e-20 101.3 76 64.5
PSO210G1046 Papaver somniferum HOM05D002981 ORTHO05D003725 4.1e-20 101.3 76 63.2
PSO761G0326 Papaver somniferum HOM05D002981 ORTHO05D003725 4.1e-20 101.3 76 63.2
Lalb_Chr02g0146691 Lupinus albus HOM05D002981 ORTHO05D003725 5.4e-20 100.9 78 65.4
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 7.0e-20 100.5 78 64.1
TAR633G1423 Trochodendron aralioides HOM05D002981 ORTHO05D003725 7.0e-20 100.5 75 66.7
Gohir.D12G129900 Gossypium hirsutum HOM05D002981 ORTHO05D003725 9.1e-20 100.1 78 62.8
Nn4g25650 Nelumbo nucifera HOM05D002981 ORTHO05D003725 9.1e-20 100.1 72 66.7
Ciclev10020618m.g Citrus clementina HOM05D002981 ORTHO05D003725 1.2e-19 99.8 78 64.1
Potri.002G198300 Populus trichocarpa HOM05D002981 ORTHO05D003725 1.2e-19 99.8 78 65.4
TWI56G0814 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 1.2e-19 99.8 76 56.6
arahy.Tifrunner.gnm1.ann1.FDR7V2 Arachis hypogaea HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 62.8
arahy.Tifrunner.gnm1.ann1.VAQ4DL Arachis hypogaea HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 62.8
CSS0025736 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 1.6e-19 99.4 75 64.0
CiPaw.08G156600 Carya illinoinensis HOM05D002981 ORTHO05D003725 1.6e-19 99.4 75 62.7
AUR62005272 Chenopodium quinoa HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 60.3
Haze_05013 Corylus avellana HOM05D002981 ORTHO05D003725 1.6e-19 99.4 79 60.8
Duzib211G0560 Durio zibethinus HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 62.8
Peaxi162Scf00673g00127 Petunia axillaris HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 64.1
Potri.014G122800 Populus trichocarpa HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 65.4
Hund21746 Selenicereus undatus HOM05D002981 ORTHO05D003725 1.6e-19 99.4 78 60.3
unitig_26.g10138 Utricularia gibba HOM05D002981 ORTHO05D003725 1.6e-19 99.4 77 59.7
AUR62000684 Chenopodium quinoa HOM05D002981 ORTHO05D003725 2.0e-19 99.0 78 60.3
Gorai.004G143300 Gossypium raimondii HOM05D002981 ORTHO05D003725 2.0e-19 99.0 78 62.8
THA.LOC104817468 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 2.0e-19 99.0 76 61.8
Thecc.01G310600 Theobroma cacao HOM05D002981 ORTHO05D003725 2.0e-19 99.0 78 64.1
CAN.G1273.1 Capsicum annuum HOM05D002981 ORTHO05D003725 2.7e-19 98.6 76 60.5
Gohir.D07G131800 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.7e-19 98.6 76 61.8
Gorai.001G143100 Gossypium raimondii HOM05D002981 ORTHO05D003725 2.7e-19 98.6 76 61.8
QL03p018289 Quercus lobata HOM05D002981 ORTHO05D003725 2.7e-19 98.6 78 64.1
Cpa.g.sc18.9 Carica papaya HOM05D002981 ORTHO05D003725 3.5e-19 98.2 78 61.5
Duzib133G0744 Durio zibethinus HOM05D002981 ORTHO05D003725 3.5e-19 98.2 76 60.5
Medtr1g087520 Medicago truncatula HOM05D002981 ORTHO05D003725 3.5e-19 98.2 78 62.8
Sc16g0008930 Simmondsia chinensis HOM05D002981 ORTHO05D003725 3.5e-19 98.2 78 61.5
ATR0706G068 Amborella trichopoda HOM05D002981 ORTHO05D003725 4.5e-19 97.8 76 61.8
Eucgr.K03531 Eucalyptus grandis HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 64.1
Psat6g163280 Pisum sativum HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 62.8
Solyc01g100320.3 Solanum lycopersicum HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 62.8
Sopen01g043830 Solanum pennellii HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 62.8
PGSC0003DMG400002779 Solanum tuberosum HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 61.5
THA.LOC104802194 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 4.5e-19 97.8 78 61.5
Ca_10298_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 5.9e-19 97.4 78 62.8
TAR365G0113 Trochodendron aralioides HOM05D002981 ORTHO05D003725 5.9e-19 97.4 78 61.5
Atru.chr5.1047 Acer truncatum HOM05D002981 ORTHO05D003725 7.7e-19 97.1 78 61.5
CANSAT54G0071 Cannabis sativa HOM05D002981 ORTHO05D003725 7.7e-19 97.1 78 59.0
Lsat_1_v5_gn_5_102801 Lactuca sativa HOM05D002981 ORTHO05D003725 7.7e-19 97.1 72 59.7
BcaB01g03165 Brassica carinata HOM05D002981 ORTHO05D003725 1.0e-18 96.7 76 59.2
DCAR_005415 Daucus carota HOM05D002981 ORTHO05D003725 1.0e-18 96.7 72 63.9
Phvul.007G215900 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 1.0e-18 96.7 75 62.7
Cc02_g34820 Coffea canephora HOM05D002981 ORTHO05D003725 1.3e-18 96.3 75 61.3
Rhsim11G0094000 Rhododendron simsii HOM05D002981 ORTHO05D003725 1.3e-18 96.3 75 62.7
SalBow7G4351 Salvia bowleyana HOM05D002981 ORTHO05D003725 1.3e-18 96.3 75 58.7
TPR.G19768 Trifolium pratense HOM05D002981 ORTHO05D003725 1.3e-18 96.3 78 62.8
vmacro01554 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 1.3e-18 96.3 75 60.0
ECA234G2827 Erigeron canadensis HOM05D002981 ORTHO05D003725 1.7e-18 95.9 75 58.7
Glyma.02G014000 Glycine max HOM05D002981 ORTHO05D003725 1.7e-18 95.9 78 62.8
MSTRG.5139 Avicennia marina HOM05D002981 ORTHO05D003725 2.2e-18 95.5 77 58.4
A03p25980 Brassica napus HOM05D002981 ORTHO05D003725 2.2e-18 95.5 76 59.2
BraA03t11815Z Brassica rapa HOM05D002981 ORTHO05D003725 2.2e-18 95.5 76 59.2
Glyma.10G014700 Glycine max HOM05D002981 ORTHO05D003725 2.2e-18 95.5 75 62.7
HanXRQChr10g0299231 Helianthus annuus HOM05D002981 ORTHO05D003725 2.2e-18 95.5 72 59.7
FAN02G4218 Fragaria x ananassa HOM05D002981 ORTHO05D003725 2.9e-18 95.1 76 59.2
FAN05G2722 Fragaria x ananassa HOM05D002981 ORTHO05D003725 2.9e-18 95.1 76 59.2
FAN09G2340 Fragaria x ananassa HOM05D002981 ORTHO05D003725 2.9e-18 95.1 76 59.2
Migut.N02114 Erythranthe guttata HOM05D002981 ORTHO05D003725 3.8e-18 94.7 75 57.3
FvH4_6g07230 Fragaria vesca HOM05D002981 ORTHO05D003725 3.8e-18 94.7 76 59.2
FAN14G0083 Fragaria x ananassa HOM05D002981 ORTHO05D003725 3.8e-18 94.7 76 59.2
Gohir.A07G127500 Gossypium hirsutum HOM05D002981 ORTHO05D003725 3.8e-18 94.7 75 58.7
Nitab4.5_0009033g0020 Nicotiana tabacum HOM05D002981 ORTHO05D003725 3.8e-18 94.7 78 61.5
Aa31LG1G28770 Aethionema arabicum HOM05D002981 ORTHO05D003725 5.0e-18 94.4 76 57.9
arahy.Tifrunner.gnm1.ann1.LY6DXQ Arachis hypogaea HOM05D002981 ORTHO05D003725 5.0e-18 94.4 78 59.0
arahy.Tifrunner.gnm1.ann1.PTRY8R Arachis hypogaea HOM05D002981 ORTHO05D003725 5.0e-18 94.4 78 59.0
BcaB02g08769 Brassica carinata HOM05D002981 ORTHO05D003725 5.0e-18 94.4 76 57.9
CARHR142860 Cardamine hirsuta HOM05D002981 ORTHO05D003725 5.0e-18 94.4 76 59.2
Manes.05G002000 Manihot esculenta HOM05D002981 ORTHO05D003725 5.0e-18 94.4 76 59.2
Oeu053701.1 Olea europaea HOM05D002981 ORTHO05D003725 5.0e-18 94.4 78 59.0
BcaC01g05028 Brassica carinata HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
C03p30980 Brassica napus HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
C04p00410 Brassica napus HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
BolC4t21686H Brassica oleracea HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
Thhalv10001515m.g Eutrema salsugineum HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
Sabra14G0091200 Salix brachista HOM05D002981 ORTHO05D003725 6.5e-18 94.0 78 62.8
Hund07135 Selenicereus undatus HOM05D002981 ORTHO05D003725 6.5e-18 94.0 76 57.9
VMungo0720G0399 Vigna mungo HOM05D002981 ORTHO05D003725 6.5e-18 94.0 75 61.3
AL4G47030 Arabidopsis lyrata HOM05D002981 ORTHO05D003725 8.5e-18 93.6 76 59.2
AT2G47470 Arabidopsis thaliana HOM05D002981 ORTHO05D003725 8.5e-18 93.6 76 59.2
ECA236G5052 Erigeron canadensis HOM05D002981 ORTHO05D003725 8.5e-18 93.6 76 57.9
Lj5g0008352 Lotus japonicus HOM05D002981 ORTHO05D003725 8.5e-18 93.6 78 61.5
Nitab4.5_0000368g0270 Nicotiana tabacum HOM05D002981 ORTHO05D003725 8.5e-18 93.6 78 61.5
QL12p028974 Quercus lobata HOM05D002981 ORTHO05D003725 8.5e-18 93.6 78 59.0
Sabra02G0159300 Salix brachista HOM05D002981 ORTHO05D003725 8.5e-18 93.6 78 62.8
unitig_21.g20026 Utricularia gibba HOM05D002981 ORTHO05D003725 8.5e-18 93.6 75 58.7
HPP92_016960 Vanilla planifolia HOM05D002981 ORTHO05D003725 8.5e-18 93.6 78 60.3
A05p00460 Brassica napus HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 56.6
BraA05t19044Z Brassica rapa HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 56.6
CDE09G1190 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 53.9
Os01g0339900 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 56.6
Prupe.6G315000 Prunus persica HOM05D002981 ORTHO05D003725 1.1e-17 93.2 78 57.7
RcHm_v2.0_Chr3g0456861 Rosa chinensis HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 57.9
SEGI_15151 Sequoiadendron giganteum HOM05D002981 ORTHO05D003725 1.1e-17 93.2 76 59.2
Gorai.007G124200 Gossypium raimondii HOM05D002981 ORTHO05D003725 1.5e-17 92.8 78 60.3
Carub.0004s3019 Capsella rubella HOM05D002981 ORTHO05D003725 1.9e-17 92.4 76 57.9
CiPaw.07G115400 Carya illinoinensis HOM05D002981 ORTHO05D003725 1.9e-17 92.4 78 59.0
Zm00001eb282710 Zea mays HOM05D002981 ORTHO05D003725 1.9e-17 92.4 76 56.6
ECA234G0860 Erigeron canadensis HOM05D002981 ORTHO05D003725 3.2e-17 91.7 75 57.3
MD04G1195300 Malus domestica HOM05D002981 ORTHO05D003725 3.2e-17 91.7 78 57.7
PGR044G1530 Punica granatum HOM05D002981 ORTHO05D003725 3.2e-17 91.7 75 57.3
SGA_v2.0_scaffold80G25880 Striga asiatica HOM05D002981 ORTHO05D003725 3.2e-17 91.7 75 58.7
ECA234G4491 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-17 91.3 75 56.0
Lalb_Chr21g0309481 Lupinus albus HOM05D002981 ORTHO05D003725 4.2e-17 91.3 78 61.5
Sed0000157 Sechium edule HOM05D002981 ORTHO05D003725 4.2e-17 91.3 76 53.9
MD12G1207400 Malus domestica HOM05D002981 ORTHO05D003725 5.5e-17 90.9 78 55.1
CsaV3_7G029820 Cucumis sativus L. HOM05D002981 ORTHO05D003725 7.2e-17 90.5 75 54.7
Zm00001eb179930 Zea mays HOM05D013194 ORTHO05D015061 7.2e-17 90.5 76 55.3
CDE02G3360 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 9.5e-17 90.1 76 53.9
Rhsim05G0133600 Rhododendron simsii HOM05D002981 ORTHO05D003725 9.5e-17 90.1 75 56.0
Os05g0156300 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 1.2e-16 89.7 76 55.3
MELO3C015939.2 Cucumis melo HOM05D002981 ORTHO05D003725 1.6e-16 89.4 75 56.0
Sp4g29410 Schrenkiella parvula HOM05D002981 ORTHO05D003725 1.6e-16 89.4 76 55.3
MSTRG.27951 Avicennia marina HOM05D002981 ORTHO05D003725 3.6e-16 88.2 72 56.9
C04p39530 Brassica napus HOM05D002981 ORTHO05D003725 3.6e-16 88.2 76 52.6
BolC4t25518H Brassica oleracea HOM05D002981 ORTHO05D003725 3.6e-16 88.2 76 52.6
ClCG09G005250 Citrullus lanatus HOM05D002981 ORTHO05D003725 4.7e-16 87.8 75 56.0
HPP92_015959 Vanilla planifolia HOM05D002981 ORTHO05D003725 2.3e-15 85.5 76 51.3
Zm00001eb131360 Zea mays HOM05D002981 ORTHO05D003725 5.2e-15 84.3 78 53.8
SHI12762 Sapria himalayana HOM05D002981 ORTHO05D003725 4.4e-14 81.3 69 56.5
Sed0023511 Sechium edule HOM05D002981 ORTHO05D003725 9.8e-14 80.1 75 48.0
SEGI_01194 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 9.8e-14 80.1 54 70.4
DCAR_025272 Daucus carota HOM05D002981 ORTHO05D003725 1.7e-13 79.3 72 51.4
vmacro19723 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 3.7e-13 78.2 78 52.6
Pp3c4_19910 Physcomitrium patens HOM05D002981 ORTHO05D003725 4.9e-13 77.8 76 46.1
Peaxi162Scf00071g00438 Petunia axillaris HOM05D002981 ORTHO05D003725 8.3e-13 77.0 78 52.6
Zm00001eb235580 Zea mays HOM05D002981 ORTHO05D003725 8.3e-13 77.0 52 65.4
Zm00001eb418550 Zea mays HOM05D002981 ORTHO05D003725 1.8e-12 75.9 76 48.7
SMO201G0065 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 3.1e-12 75.1 75 48.0
Gohir.D11G116000 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.3e-10 69.7 49 63.3
CBR_g41286 Chara braunii HOM05D002981 ORTHO05D003725 2.9e-10 68.6 70 47.1
Haze_04080 Corylus avellana HOM05D002981 ORTHO05D003725 5.0e-10 67.8 67 55.2
Sc09g0002680 Simmondsia chinensis HOM05D002981 ORTHO05D003725 5.0e-10 67.8 49 59.2
CBR_g41277 Chara braunii HOM05D002981 ORTHO05D003725 8.6e-10 67.0 70 45.7
Mapoly0016s0144 Marchantia polymorpha HOM05D002981 ORTHO05D003725 4.3e-09 64.7 76 39.5
CBR_g35008 Chara braunii HOM05D002981 ORTHO05D003725 5.6e-09 64.3 72 44.4
SMO270G0056 Selaginella moellendorffii HOM05D002981 ORTHO05D003725 1.2e-08 63.2 75 41.3
Lsat_1_v5_gn_7_73501 Lactuca sativa HOM05D002981 ORTHO05D003725 4.7e-08 61.2 77 41.6
VMungo0251G1886 Vigna mungo HOM05D002981 ORTHO05D003725 5.2e-07 57.8 68 48.5
RcHm_v2.0_Chr6g0255891 Rosa chinensis HOM05D002981 ORTHO05D003725 1.2e-06 56.6 62 48.4
HPP92_015970 Vanilla planifolia HOM05D002981 ORTHO05D003725 1.5e-06 56.2 49 51.0
Lalb_Chr06g0166671 Lupinus albus HOM05D002981 ORTHO05D003725 5.7e-06 54.3 34 70.6


User provided reference genes

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