Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 2.9e-54 214.9 106 100.0
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 6.1e-52 207.2 106 95.3
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 3.0e-51 204.9 106 94.3
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 8.8e-51 203.4 106 93.4
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 2.0e-47 192.2 106 87.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 5.9e-47 190.7 106 86.8
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.8e-46 188.0 107 88.8
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 5.5e-45 184.1 106 85.8
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 9.5e-45 183.3 112 81.2
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 3.0e-43 178.3 106 81.1
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 3.0e-43 178.3 105 81.0
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 6.8e-43 177.2 106 82.1
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.2e-42 176.4 106 79.2
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 2.0e-42 175.6 106 80.2
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.6e-42 175.3 110 78.2
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.4e-42 174.5 106 79.2
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 2.2e-41 172.2 106 78.3
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.2e-41 172.2 106 79.2
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.8e-41 171.8 106 78.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.7e-41 171.4 106 78.3
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 4.9e-41 171.0 112 75.0
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 8.3e-41 170.2 106 78.3
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.3e-41 170.2 104 77.9
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 1.1e-40 169.9 107 74.8
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.4e-40 169.5 104 77.9
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.4e-40 169.5 104 77.9
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.4e-40 169.5 104 79.8
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 2.4e-40 168.7 105 76.2
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 4.1e-40 167.9 104 78.8
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 4.1e-40 167.9 104 76.9
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 5.4e-40 167.5 106 78.3
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 9.2e-40 166.8 106 75.5
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 9.2e-40 166.8 106 79.2
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.6e-39 166.0 104 78.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.0e-39 165.6 106 76.4
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.5e-39 164.9 104 78.8
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 3.5e-39 164.9 113 72.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 4.5e-39 164.5 106 76.4
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.9e-39 164.1 106 76.4
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 5.9e-39 164.1 106 77.4
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 7.8e-39 163.7 107 75.7
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 7.8e-39 163.7 105 74.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 1.7e-38 162.5 114 69.3
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.7e-38 162.5 114 69.3
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 1.7e-38 162.5 105 73.3
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.7e-38 162.5 106 76.4
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 2.3e-38 162.2 114 69.3
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.9e-38 161.8 106 73.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 2.9e-38 161.8 107 75.7
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 5.0e-38 161.0 114 68.4
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 6.6e-38 160.6 114 68.4
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.1e-37 159.8 114 68.4
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.9e-37 159.1 106 74.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 3.3e-37 158.3 115 69.6
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 4.3e-37 157.9 90 83.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 4.3e-37 157.9 107 73.8
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.8e-36 155.2 108 74.1
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 4.7e-36 154.5 115 67.8
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 4.7e-36 154.5 108 73.1
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 8.0e-36 153.7 107 72.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.0e-35 153.3 108 73.1
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.4e-35 152.9 116 67.2
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.4e-35 152.9 107 70.1
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.8e-35 152.5 116 66.4
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.8e-35 152.5 108 71.3
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 2.3e-35 152.1 115 67.8
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.0e-35 151.8 101 71.3
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 5.2e-35 151.0 116 66.4
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 5.2e-35 151.0 116 66.4
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 5.2e-35 151.0 109 72.5
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 5.2e-35 151.0 108 71.3
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 6.8e-35 150.6 115 67.0
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 6.8e-35 150.6 108 69.4
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 8.9e-35 150.2 108 69.4
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.2e-34 149.8 105 69.5
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.5e-34 149.4 103 71.8
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 1.5e-34 149.4 106 69.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.5e-34 149.4 98 73.5
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 3.4e-34 148.3 115 66.1
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 4.4e-34 147.9 108 67.6
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.4e-34 147.9 104 72.1
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 4.4e-34 147.9 108 69.4
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 4.4e-34 147.9 108 69.4
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 4.4e-34 147.9 107 67.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 5.7e-34 147.5 109 69.7
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.3e-33 146.4 113 66.4
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.7e-33 146.0 112 69.6
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.2e-33 145.6 107 68.2
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.9e-33 145.2 115 63.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.2e-31 139.8 121 60.3
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 1.6e-31 139.4 114 63.2
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 3.5e-31 138.3 106 66.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.6e-31 137.9 66 90.9
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 4.6e-31 137.9 93 68.8
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 7.8e-31 137.1 115 62.6
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.0e-30 136.7 106 65.1
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 2.3e-30 135.6 66 89.4
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.0e-30 135.2 106 65.1
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 6.6e-30 134.0 80 76.2
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 7.3e-29 130.6 62 91.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.2e-28 129.8 76 77.6
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.6e-28 128.3 64 87.5
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.2e-28 127.5 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.4e-27 126.3 74 73.0
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.1e-27 125.2 94 66.0
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.6e-26 122.1 95 68.4
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 4.4e-26 121.3 76 73.7
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 7.5e-26 120.6 73 71.2
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 3.7e-25 118.2 72 69.4
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 3.7e-25 118.2 62 85.5
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 7.0e-24 114.0 73 74.0
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 7.8e-23 110.5 65 80.0
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 5.2e-19 97.8 69 73.9
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.6e-18 95.5 67 77.6
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.7e-17 92.8 77 61.0
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 4.1e-16 88.2 74 62.2
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 2.1e-15 85.9 71 63.4
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.1e-11 73.6 38 84.2
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 2.6e-10 68.9 35 82.9


User provided reference genes

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