Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.4e-96 355.5 180 100.0
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 8.4e-78 293.9 179 85.5
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 4.2e-77 291.6 179 84.9
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 9.6e-74 280.4 179 82.1
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.1e-66 256.9 177 75.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 3.7e-65 251.9 187 70.6
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.0e-63 246.1 179 72.6
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.3e-62 243.4 180 71.7
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 8.5e-62 240.7 175 70.9
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 8.5e-62 240.7 175 70.9
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 4.2e-61 238.4 186 69.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.7e-54 216.5 185 62.2
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.5e-53 212.6 164 64.6
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 7.2e-53 211.1 154 69.5
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.2e-52 210.3 186 60.8
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.6e-52 209.9 182 62.1
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 3.6e-52 208.8 166 63.9
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 6.1e-52 208.0 186 59.7
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 1.0e-51 207.2 121 78.5
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.9e-51 205.3 133 75.9
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 5.2e-51 204.9 138 71.7
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.2e-51 204.9 192 59.4
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.1e-50 203.8 186 60.8
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.5e-50 203.4 127 77.2
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 4.4e-50 201.8 175 59.4
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 5.7e-50 201.4 186 58.6
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.7e-49 199.9 181 58.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.8e-49 199.1 132 72.7
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 2.8e-49 199.1 179 60.3
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 4.8e-49 198.4 158 65.2
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 6.3e-49 198.0 136 75.0
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 6.3e-49 198.0 186 59.1
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.4e-48 196.8 143 66.4
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.8e-48 196.4 144 70.8
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.8e-48 196.4 175 61.1
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.8e-48 196.4 138 72.5
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 1.8e-48 196.4 146 67.8
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 3.1e-48 195.7 129 72.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.1e-48 195.3 178 60.7
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 5.3e-48 194.9 163 60.7
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 5.3e-48 194.9 187 57.8
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 7.0e-48 194.5 187 59.4
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.6e-47 193.4 130 73.8
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.0e-47 193.0 148 68.9
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 2.6e-47 192.6 163 62.6
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.5e-47 192.2 146 64.4
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 3.5e-47 192.2 162 59.3
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 4.5e-47 191.8 145 65.5
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.9e-47 191.4 188 55.9
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 7.7e-47 191.0 126 74.6
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 7.7e-47 191.0 157 65.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 7.7e-47 191.0 138 65.9
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.0e-46 190.7 188 55.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.0e-46 190.7 188 55.9
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.0e-46 190.7 183 57.9
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.0e-46 190.7 146 65.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.3e-46 190.3 130 72.3
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.2e-46 189.5 131 72.5
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 5.0e-46 188.3 128 71.1
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 5.0e-46 188.3 142 69.7
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 8.5e-46 187.6 142 65.5
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 8.5e-46 187.6 164 57.3
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.1e-45 187.2 138 64.5
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.5e-45 186.8 167 58.1
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.5e-45 186.0 183 57.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 9.4e-45 184.1 142 66.2
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.4e-45 184.1 136 64.0
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 9.4e-45 184.1 129 65.1
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.2e-44 183.7 136 64.7
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.6e-44 183.3 140 65.7
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.7e-44 182.6 171 57.3
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 3.6e-44 182.2 137 66.4
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.6e-44 182.2 186 53.8
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.6e-44 182.2 106 79.2
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 3.6e-44 182.2 177 55.9
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 4.7e-44 181.8 140 64.3
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 8.0e-44 181.0 164 57.9
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.8e-43 179.9 144 62.5
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.8e-43 179.9 140 65.0
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 1.8e-43 179.9 184 53.8
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 3.0e-43 179.1 179 56.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.6e-42 176.0 167 55.1
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.4e-42 175.3 122 67.2
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 5.7e-42 174.9 129 64.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 9.7e-42 174.1 150 60.7
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-41 173.3 135 63.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-41 173.3 135 63.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.7e-41 173.3 135 63.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.7e-41 173.3 135 63.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.7e-41 173.3 135 63.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.8e-41 172.6 140 62.9
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.7e-41 172.2 171 53.8
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 6.3e-41 171.4 144 59.0
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 8.2e-41 171.0 118 68.6
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 9.1e-40 167.5 119 65.5
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.5e-38 161.4 116 68.1
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.9e-37 159.8 104 71.2
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.1e-36 156.4 141 53.9
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 3.6e-36 155.6 117 65.0
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 9.8e-34 147.5 96 71.9
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.7e-31 139.4 111 64.9
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.7e-31 139.4 111 64.9
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.7e-31 139.4 111 64.9
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 3.7e-25 119.0 137 45.3
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 8.3e-25 117.9 127 56.7
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.1e-24 117.5 120 58.3
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.7e-22 110.2 120 49.2
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.5e-21 107.1 136 41.9
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.6e-20 103.6 81 59.3
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.3e-19 99.8 110 48.2
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.4e-18 95.9 68 69.1
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.8e-16 90.1 114 40.4
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 6.6e-14 81.6 50 70.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.4e-08 63.2 130 36.2
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 5.4e-08 62.0 42 57.1


User provided reference genes

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