Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.5e-189 666.0 335 100.0
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 3.0e-161 572.0 340 85.3
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 5.6e-160 567.8 337 86.6
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 2.9e-156 555.4 329 83.9
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 9.3e-155 550.4 328 83.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 2.5e-152 542.3 336 80.7
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 7.6e-149 530.8 329 81.2
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 8.4e-148 527.3 328 81.1
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 3.4e-141 505.4 340 77.4
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 2.7e-138 495.7 332 75.3
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.3e-135 486.9 326 75.2
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.4e-131 473.4 330 71.5
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 2.6e-128 462.6 330 71.2
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 1.7e-127 459.9 333 69.1
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 6.3e-127 458.0 333 67.9
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.8e-126 456.4 333 67.9
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 3.1e-126 455.7 333 67.6
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 2.6e-125 452.6 336 67.0
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 8.5e-124 447.6 334 67.4
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.5e-123 446.0 332 67.8
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.2e-122 443.7 331 67.1
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 6.1e-122 441.4 329 67.8
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.0e-121 440.7 332 67.5
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 1.0e-121 440.7 332 65.4
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.8e-121 439.9 331 67.1
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.3e-121 439.5 334 68.0
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 5.2e-121 438.3 340 66.2
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 6.7e-121 438.0 330 64.8
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.0e-120 436.4 343 65.6
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 3.3e-120 435.6 340 66.5
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 3.3e-120 435.6 334 65.0
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 9.7e-120 434.1 328 64.9
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.8e-118 429.9 334 66.2
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.1e-118 429.1 331 67.4
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 4.1e-118 428.7 329 65.3
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 7.0e-118 427.9 332 65.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.5e-117 425.6 332 66.3
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.7e-116 423.3 332 64.2
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 6.5e-116 421.4 328 66.8
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.1e-115 420.6 329 66.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.5e-115 420.2 332 64.2
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 5.5e-115 418.3 339 64.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 2.1e-114 416.4 328 65.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.3e-113 412.9 332 62.3
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 4.0e-113 412.1 330 66.4
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 5.2e-113 411.8 329 65.7
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 8.8e-113 411.0 336 64.6
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 1.2e-112 410.6 330 66.1
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.2e-112 410.6 371 58.5
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.2e-112 410.6 331 65.9
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.5e-112 410.2 336 63.1
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.6e-112 409.5 337 62.6
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.6e-112 409.5 337 62.6
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 5.7e-112 408.3 330 64.8
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 7.5e-112 407.9 330 66.1
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 2.2e-111 406.4 267 75.3
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 4.8e-111 405.2 330 61.2
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 6.3e-111 404.8 345 64.1
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.1e-110 404.1 331 62.2
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.8e-110 403.3 337 62.9
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.4e-110 402.9 333 63.1
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 2.4e-110 402.9 336 61.6
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 2.4e-110 402.9 336 61.6
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 3.1e-110 402.5 334 61.1
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 2.0e-109 399.8 339 60.5
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.0e-108 397.5 324 63.0
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.5e-107 393.7 272 72.1
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 2.5e-107 392.9 331 63.4
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 7.2e-107 391.3 354 57.1
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 9.4e-107 391.0 335 58.8
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 8.0e-106 387.9 341 60.1
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 8.0e-106 387.9 271 68.6
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 1.4e-105 387.1 330 59.4
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 8.8e-105 384.4 344 60.2
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.0e-104 383.3 332 59.6
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 7.5e-104 381.3 357 56.3
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 2.2e-103 379.8 328 60.7
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 4.8e-103 378.6 275 66.5
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 4.8e-103 378.6 338 59.2
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 6.3e-103 378.3 369 54.2
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 2.7e-101 372.9 379 53.6
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 7.7e-101 371.3 273 68.5
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.9e-100 369.4 332 56.9
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 8.6e-100 367.9 291 62.2
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 6.1e-98 361.7 287 66.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 4.4e-96 355.5 273 66.3
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 3.7e-95 352.4 286 61.5
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 3.1e-94 349.4 297 59.9
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 4.1e-94 349.0 272 62.5
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 9.2e-94 347.8 273 66.3
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 5.0e-92 342.0 286 60.8
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 5.0e-92 342.0 277 61.0
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 3.0e-89 332.8 273 63.4
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.5e-88 330.5 289 63.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 3.4e-88 329.3 293 59.4
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 6.6e-84 315.1 247 63.6
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 1.5e-83 313.9 333 52.0
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 7.5e-80 301.6 223 72.2
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 4.9e-79 298.9 223 71.7
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 4.9e-79 298.9 250 57.6
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 1.2e-77 294.3 274 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 3.1e-73 279.6 253 54.2
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 4.0e-73 279.3 197 76.6
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 2.4e-70 270.0 262 56.9
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 2.1e-69 266.9 222 65.3
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 7.6e-64 248.4 216 57.4
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.9e-63 246.5 269 49.4
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 3.2e-62 243.0 257 49.4
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.0e-60 236.5 158 76.6
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.6e-58 230.7 220 57.3
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.6e-45 186.0 237 45.6
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 2.5e-43 180.3 151 61.6
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.4e-41 174.5 199 53.8
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.9e-39 166.8 274 39.4
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 7.9e-37 158.7 259 37.1
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 6.5e-23 112.5 89 66.3
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.0e-15 88.6 60 68.3
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 2.8e-10 70.5 56 67.9
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-09 66.2 152 34.2


User provided reference genes

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