Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 3.6e-94 348.2 170 100.0
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.8e-50 203.0 110 92.7
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 4.1e-50 201.8 110 93.6
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 3.0e-48 195.7 110 87.3
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.5e-47 193.4 110 86.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.9e-47 193.0 110 86.4
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 3.3e-47 192.2 110 85.5
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 9.5e-47 190.7 110 83.6
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 1.6e-46 189.9 110 85.5
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 6.2e-46 188.0 109 85.3
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.1e-45 185.7 110 80.9
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 6.8e-45 184.5 110 80.9
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.5e-44 183.3 110 78.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 2.6e-44 182.6 109 82.6
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 5.8e-44 181.4 113 77.9
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.8e-44 181.4 109 78.9
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.3e-43 180.3 112 78.6
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.3e-43 180.3 110 80.0
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.7e-43 179.9 110 79.1
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.7e-43 179.9 110 80.0
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 2.2e-43 179.5 112 75.9
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.9e-43 179.1 109 78.9
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.7e-43 178.7 110 78.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.7e-43 178.7 109 78.9
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 4.9e-43 178.3 109 76.1
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 6.4e-43 177.9 112 77.7
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 6.4e-43 177.9 110 78.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.2e-42 175.6 110 79.1
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 3.2e-42 175.6 109 79.8
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 4.1e-42 175.3 110 79.1
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 4.1e-42 175.3 110 76.4
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 5.4e-42 174.9 114 73.7
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 9.2e-42 174.1 110 80.0
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 1.6e-41 173.3 110 74.5
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 1.6e-41 173.3 112 72.3
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 2.0e-41 172.9 110 73.6
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.7e-41 172.6 110 74.5
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 2.7e-41 172.6 109 77.1
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 3.5e-41 172.2 110 74.5
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 6.0e-41 171.4 112 76.8
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 6.0e-41 171.4 110 75.5
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 6.0e-41 171.4 110 73.6
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 7.8e-41 171.0 114 72.8
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.3e-40 170.2 108 74.1
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 1.3e-40 170.2 110 73.6
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 1.3e-40 170.2 110 70.0
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 1.7e-40 169.9 109 76.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.3e-40 169.5 108 74.1
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.3e-40 169.5 109 76.1
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 3.0e-40 169.1 110 73.6
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.0e-40 169.1 109 76.1
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 5.0e-40 168.3 110 70.0
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 6.6e-40 167.9 110 72.7
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 6.6e-40 167.9 109 75.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.1e-39 167.2 107 73.8
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 1.1e-39 167.2 109 70.6
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 2.5e-39 166.0 111 73.9
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 3.3e-39 165.6 120 69.2
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 4.3e-39 165.2 112 69.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 4.3e-39 165.2 110 70.9
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 4.3e-39 165.2 110 74.5
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 7.3e-39 164.5 107 72.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 1.6e-38 163.3 110 69.1
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 1.6e-38 163.3 112 70.5
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 3.6e-38 162.2 106 72.6
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 6.2e-38 161.4 109 70.6
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.1e-37 160.6 109 69.7
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.1e-37 160.6 109 69.7
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-37 160.2 112 67.0
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.4e-37 160.2 122 66.4
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 7.5e-36 154.5 124 62.9
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 2.9e-35 152.5 110 65.5
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.1e-34 150.6 103 69.9
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.4e-34 150.2 118 65.3
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 6.0e-33 144.8 109 68.8
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 6.0e-33 144.8 112 62.5
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 1.0e-32 144.1 115 61.7
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.0e-32 142.5 110 62.7
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 5.1e-32 141.7 136 50.7
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 8.6e-32 141.0 136 52.2
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 8.6e-32 141.0 110 62.7
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.9e-31 139.8 136 51.5
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.9e-31 139.8 151 47.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.9e-31 139.8 112 62.5
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.5e-31 139.4 136 51.5
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 5.6e-31 138.3 112 59.8
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 2.8e-30 136.0 109 59.6
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 4.7e-30 135.2 109 61.5
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 4.7e-30 135.2 109 61.5
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.7e-30 135.2 109 61.5
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 6.2e-30 134.8 135 52.6
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 6.2e-30 134.8 109 59.6
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 6.2e-30 134.8 108 63.0
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.1e-29 134.0 109 60.6
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.1e-29 134.0 109 60.6
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.1e-29 134.0 109 60.6
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.1e-29 134.0 108 62.0
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 2.3e-29 132.9 109 59.6
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 2.3e-29 132.9 110 62.7
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 4.0e-29 132.1 105 60.0
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.2e-28 130.6 109 60.6
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.5e-28 130.2 118 56.8
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.3e-27 127.1 108 52.8
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 2.2e-27 126.3 73 83.6
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 1.1e-26 124.0 138 47.1
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 7.1e-26 121.3 112 54.5
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 3.5e-25 119.0 86 65.1
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 4.6e-25 118.6 105 55.2
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 7.8e-25 117.9 64 87.5
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.0e-24 117.5 98 59.2
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.3e-24 116.3 89 66.3
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.3e-16 89.7 110 48.2
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.9e-15 86.7 75 57.3
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.7e-11 73.6 112 37.5
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.9e-11 72.8 56 66.1
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 4.9e-11 72.0 107 41.1
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.9e-10 70.1 63 50.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 2.8e-06 56.2 34 67.6
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 3.7e-06 55.8 34 79.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 3.7e-06 55.8 34 79.4


User provided reference genes

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