Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.0e-148 528.5 266 100.0
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 5.2e-132 474.6 266 91.0
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 5.2e-132 474.6 269 91.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.7e-117 425.6 272 80.9
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 5.4e-113 411.4 292 76.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 5.4e-113 411.4 292 76.0
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 3.0e-108 395.6 265 78.5
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.2e-107 393.7 266 78.2
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 2.6e-107 392.5 264 77.7
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 8.3e-106 387.5 264 78.0
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.0e-100 369.0 285 70.9
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.9e-98 362.5 286 68.9
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 6.4e-98 361.3 286 67.8
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 8.3e-98 360.9 291 68.0
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 8.3e-98 360.9 298 67.4
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 8.3e-98 360.9 294 66.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.8e-97 359.8 278 68.3
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 2.4e-97 359.4 277 69.3
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.2e-97 359.0 273 70.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.2e-97 357.5 293 66.6
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 2.0e-96 356.3 276 70.7
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.0e-96 356.3 283 69.6
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.7e-96 355.9 287 65.2
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 3.5e-96 355.5 305 65.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.6e-96 355.1 277 67.5
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.3e-95 353.6 283 66.4
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.9e-95 352.1 279 66.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 5.0e-95 351.7 291 65.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-94 350.5 291 64.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.9e-94 349.7 273 67.8
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 2.5e-94 349.4 292 66.1
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 2.5e-94 349.4 272 72.1
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 3.3e-94 349.0 285 67.4
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.3e-94 349.0 285 67.4
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.6e-94 348.2 285 67.4
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 9.5e-94 347.4 275 66.2
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.6e-93 346.7 288 64.9
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.6e-93 345.5 283 67.8
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 3.6e-93 345.5 274 69.0
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.3e-92 342.8 276 66.7
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.0e-91 339.7 284 64.1
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.6e-91 339.3 270 67.0
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 4.4e-91 338.6 286 65.4
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 1.7e-90 336.7 286 65.4
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.2e-90 336.3 280 63.9
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 3.7e-90 335.5 283 65.0
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 6.4e-90 334.7 283 64.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 8.3e-90 334.3 201 82.1
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 8.3e-90 334.3 263 68.4
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.1e-89 334.0 311 60.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.2e-89 332.4 282 66.3
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.6e-88 330.1 283 65.4
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.7e-88 329.3 294 63.3
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.5e-88 328.9 344 56.1
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 7.8e-88 327.8 272 67.6
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.7e-87 326.6 290 61.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.0e-87 325.9 293 63.5
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 3.9e-87 325.5 285 63.2
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 5.0e-87 325.1 273 65.9
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.1e-86 323.9 302 57.0
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.9e-86 323.2 192 88.0
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.5e-86 322.8 280 63.2
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 9.5e-86 320.9 281 61.9
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.2e-85 320.5 277 64.6
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.2e-85 320.5 267 65.5
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 2.3e-84 316.2 282 61.3
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 3.1e-84 315.8 407 49.4
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 4.0e-84 315.5 361 51.2
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 8.9e-84 314.3 274 60.9
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.6e-83 312.8 287 63.1
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.3e-82 310.5 279 63.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.7e-82 310.1 216 72.7
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.4e-81 306.2 271 62.4
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 3.2e-81 305.8 235 68.1
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.2e-81 305.8 282 59.9
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.6e-80 303.5 284 60.6
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.6e-80 303.5 296 60.5
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 5.1e-79 298.5 281 60.5
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 6.6e-79 298.1 200 73.5
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 8.6e-79 297.7 283 57.6
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 1.5e-78 297.0 288 59.4
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 9.5e-78 294.3 265 60.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 4.7e-77 292.0 197 72.1
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.4e-76 290.4 269 60.6
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 4.0e-76 288.9 321 53.0
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 4.0e-76 288.9 273 60.8
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.5e-75 287.0 305 54.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 4.4e-75 285.4 309 53.7
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.3e-74 283.9 297 55.9
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.8e-74 282.3 261 58.6
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 5.4e-73 278.5 270 57.8
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 3.3e-70 269.2 195 68.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.3e-70 269.2 199 66.8
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.4e-67 259.2 233 62.2
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 7.1e-65 251.5 254 55.5
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.0e-63 247.7 315 48.9
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.6e-63 245.0 153 78.4
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.8e-61 239.6 161 78.9
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.8e-61 238.8 167 73.7
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.8e-53 213.0 268 51.5
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.8e-52 210.3 132 79.5
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.1e-52 209.5 131 77.9
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 3.9e-47 192.6 227 48.5
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 9.6e-46 188.0 211 52.1
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 7.6e-43 178.3 397 36.5
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 7.9e-40 168.3 103 79.6
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 1.0e-39 167.9 186 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 3.9e-31 139.4 149 55.0
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.2e-26 123.6 80 70.0
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.7e-24 116.7 75 73.3
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.1e-23 112.5 96 62.5
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.3e-22 109.8 221 38.0
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.8e-21 106.7 284 33.5
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 2.4e-12 77.0 249 28.9
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.9e-11 72.4 64 57.8
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.0e-10 71.6 38 92.1
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.8e-10 69.7 37 89.2
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 6.5e-10 68.9 46 71.7
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.1e-09 68.2 34 97.1
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.5e-09 67.8 37 89.2
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.0e-07 59.7 61 54.1


User provided reference genes

Program Settings