Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 4.9e-260 900.6 446 100.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 2.6e-245 851.7 451 93.3
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 2.4e-243 845.1 452 92.5
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 2.7e-242 841.6 451 92.2
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.3e-233 812.8 450 88.7
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 3.3e-232 808.1 450 88.2
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 5.6e-232 807.4 450 88.4
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 9.6e-232 806.6 452 88.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.2e-229 799.7 454 85.9
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.7e-228 795.8 450 87.1
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 7.9e-226 786.9 460 86.1
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 7.4e-224 780.4 460 85.4
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 7.4e-224 780.4 448 84.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.4e-222 775.4 458 85.8
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 4.0e-222 774.6 454 83.7
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 2.6e-221 771.9 453 83.7
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 3.4e-221 771.5 451 83.1
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 5.8e-221 770.8 454 83.5
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 9.9e-221 770.0 461 82.6
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.3e-220 769.6 454 83.3
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.7e-220 769.2 453 81.9
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 4.9e-220 767.7 454 83.3
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 6.4e-220 767.3 461 82.6
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.4e-219 765.4 460 83.3
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 3.2e-219 765.0 452 83.4
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.6e-218 762.7 452 83.2
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.1e-218 762.3 456 83.6
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.1e-218 762.3 456 83.6
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.3e-217 759.6 449 83.3
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 3.0e-217 758.4 454 83.7
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 8.7e-217 756.9 455 82.0
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 4.3e-216 754.6 456 82.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 7.4e-216 753.8 453 81.9
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 7.4e-216 753.8 453 82.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 3.7e-215 751.5 452 81.9
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 4.8e-215 751.1 517 74.5
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.8e-215 751.1 472 80.9
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.4e-214 749.6 454 81.9
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 4.0e-214 748.0 458 79.9
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 6.9e-214 747.3 471 79.2
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.5e-213 746.1 456 80.5
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 4.5e-213 744.6 449 81.1
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 4.5e-213 744.6 451 81.4
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.2e-212 742.3 469 79.7
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.9e-212 741.9 472 79.2
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 4.6e-210 734.6 452 80.5
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 7.9e-210 733.8 456 80.7
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 3.9e-209 731.5 452 80.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 5.1e-209 731.1 456 79.8
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.9e-208 729.2 452 79.9
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.9e-208 729.2 450 80.4
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.5e-208 728.8 459 79.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 5.7e-208 727.6 448 80.8
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.7e-207 724.9 459 78.9
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 6.3e-207 724.2 449 80.8
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.2e-205 719.9 453 80.1
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.5e-205 719.5 452 79.2
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.0e-205 719.2 458 77.9
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.2e-202 709.9 442 80.8
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.2e-202 709.9 448 79.0
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.6e-202 708.4 451 78.7
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 6.1e-202 707.6 456 77.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.8e-201 706.1 449 79.1
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.3e-201 705.7 448 78.6
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.5e-200 702.2 456 77.6
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 3.3e-200 701.8 456 78.1
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 4.3e-200 701.4 448 78.3
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 4.8e-199 698.0 445 78.0
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 8.2e-199 697.2 431 80.7
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-198 696.8 445 78.0
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.4e-198 696.4 456 77.9
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 4.1e-198 694.9 431 80.3
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 6.9e-198 694.1 408 83.6
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 5.9e-197 691.0 456 77.0
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 6.5e-196 687.6 450 77.1
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.4e-195 686.4 450 76.9
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.9e-195 686.0 454 76.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 5.1e-193 677.9 448 74.8
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 5.1e-193 677.9 457 76.1
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 8.8e-193 677.2 460 75.4
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.1e-192 676.8 457 74.2
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 9.7e-192 673.7 455 76.7
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 7.0e-190 667.5 460 74.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 7.0e-190 667.5 358 90.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.3e-188 663.3 452 76.1
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 8.5e-188 660.6 357 90.2
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 8.8e-185 650.6 460 73.7
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.6e-181 639.0 445 72.8
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.9e-179 632.9 390 77.9
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.9e-179 632.9 358 85.2
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 4.5e-173 611.7 332 89.5
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 8.3e-167 590.9 332 86.1
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.3e-164 582.8 414 68.8
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.3e-164 582.8 409 68.0
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.9e-163 579.7 357 81.8
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 9.5e-163 577.4 416 68.3
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.4e-161 573.5 353 81.3
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.4e-158 563.5 456 66.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 7.8e-157 557.8 417 71.0
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 9.8e-152 540.8 308 85.7
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 8.3e-151 537.7 394 66.2
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 2.9e-143 512.7 412 61.9
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 4.9e-143 511.9 306 81.4
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.1e-139 500.7 309 81.2
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 4.3e-139 498.8 279 86.7
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.0e-132 476.1 429 60.8
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.9e-131 473.4 318 73.6
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.9e-127 459.5 413 61.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.2e-125 454.1 236 91.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.2e-125 454.1 236 91.1
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.0e-121 439.1 332 67.8
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.5e-112 409.1 413 49.9
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.8e-90 336.7 242 73.6
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-79 300.4 320 48.8
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 5.7e-67 259.2 337 43.9
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 5.9e-64 249.2 146 84.9
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.8e-58 229.6 401 36.7
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.2e-54 216.5 383 37.1
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-49 201.8 349 36.1
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.6e-48 198.0 344 35.8
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 7.7e-48 195.7 117 82.9
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.2e-45 188.3 149 61.7
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.7e-42 177.9 102 82.4
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 6.3e-42 176.0 368 30.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.7e-39 167.9 100 81.0
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 6.1e-37 159.5 96 83.3
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.7e-21 106.7 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 4.0e-20 103.6 89 60.7
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 9.6e-14 82.4 45 93.3
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 8.4e-10 69.3 150 30.0
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 6.0e-08 63.2 38 81.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.3e-07 62.0 42 73.8


User provided reference genes

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