Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.2e-177 625.5 320 100.0
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.9e-161 572.0 320 90.3
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 5.4e-160 567.8 320 90.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.2e-159 566.6 320 90.0
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.9e-152 542.7 322 85.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 2.3e-147 525.8 320 80.0
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.2e-146 523.5 320 80.0
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.7e-145 519.6 320 78.8
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 6.4e-145 517.7 320 78.8
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 2.4e-144 515.8 320 80.6
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 1.2e-143 513.5 320 77.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.7e-143 512.3 317 78.2
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 4.6e-143 511.5 320 76.6
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.0e-142 510.4 320 77.2
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-142 510.0 320 76.6
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.3e-142 509.2 320 77.5
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 8.6e-142 507.3 318 78.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.1e-141 506.9 320 77.2
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.5e-141 505.8 320 77.2
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 3.3e-141 505.4 321 79.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 1.2e-140 503.4 326 78.8
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.6e-140 503.1 320 75.6
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 8.1e-140 500.7 320 77.8
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.8e-139 499.6 320 75.9
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.1e-139 498.8 320 75.6
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.2e-138 496.9 320 75.3
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-138 495.7 319 76.5
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 3.4e-138 495.4 320 75.6
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.8e-137 491.9 320 75.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 4.9e-137 491.5 320 75.6
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 4.9e-137 491.5 320 75.3
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 6.4e-137 491.1 320 75.3
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 6.4e-137 491.1 320 75.3
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 8.4e-137 490.7 322 75.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.2e-136 488.8 320 74.4
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 4.1e-136 488.4 320 74.7
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 5.4e-136 488.0 328 74.7
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 5.4e-136 488.0 320 74.1
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 7.1e-136 487.6 327 73.4
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 9.2e-136 487.3 320 74.4
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.2e-135 486.9 320 74.4
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.2e-135 486.9 320 74.4
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.2e-135 486.9 320 74.1
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 3.5e-135 485.3 320 73.8
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 4.6e-135 485.0 320 73.8
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 4.6e-135 485.0 320 73.8
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 4.6e-135 485.0 320 73.8
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.0e-134 483.8 320 73.1
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.0e-134 483.8 320 73.4
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.0e-134 483.8 320 73.8
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.0e-134 483.8 320 73.8
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 2.3e-134 482.6 320 72.8
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.3e-134 482.6 327 73.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 3.9e-134 481.9 321 74.5
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 6.6e-134 481.1 322 73.3
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 8.6e-134 480.7 327 72.8
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 8.6e-134 480.7 326 73.6
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.1e-133 480.3 320 74.7
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.1e-133 480.3 321 73.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.5e-133 479.9 322 73.0
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.9e-133 479.6 327 73.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.8e-132 475.7 325 73.5
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.6e-132 475.3 323 74.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 6.2e-132 474.6 324 72.2
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 4.0e-131 471.9 321 72.6
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 5.2e-131 471.5 328 72.3
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.7e-129 466.5 328 71.0
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 4.9e-129 464.9 324 71.9
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 4.9e-129 464.9 323 72.1
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 6.4e-129 464.5 328 70.7
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 6.4e-129 464.5 328 69.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 7.1e-128 461.1 328 69.2
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.1e-127 459.5 317 72.9
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 2.7e-127 459.1 328 69.8
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-127 458.8 318 72.3
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 7.8e-127 457.6 320 69.7
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.3e-125 451.1 318 72.0
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 2.4e-123 446.0 325 69.8
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 2.6e-122 442.6 320 69.1
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-121 439.1 300 73.3
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-119 432.2 300 72.0
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 9.6e-117 424.1 317 65.9
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.1e-115 420.6 305 71.5
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 2.4e-115 419.5 320 64.4
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.1e-115 419.1 301 68.8
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 9.9e-114 414.1 320 63.4
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.3e-113 413.7 320 64.7
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.7e-113 413.3 318 64.8
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.8e-113 412.1 293 68.6
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 9.3e-112 407.5 319 62.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 3.0e-110 402.5 258 78.3
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 7.4e-109 397.9 320 63.8
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 2.6e-106 389.4 258 74.4
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 7.6e-106 387.9 320 62.5
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 2.1e-103 379.8 326 56.1
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.3e-102 377.1 320 61.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.8e-102 376.7 311 62.4
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.1e-102 375.2 319 62.4
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 4.3e-101 372.1 315 57.5
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 3.1e-99 365.9 317 56.5
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.9e-96 356.7 251 72.5
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-95 353.6 257 72.0
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 8.7e-94 347.8 320 55.0
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.3e-93 345.9 316 54.4
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.4e-91 339.7 291 60.5
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 2.6e-90 336.3 327 51.1
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.8e-86 321.2 306 59.2
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 9.7e-85 317.8 321 50.5
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 7.7e-82 308.1 214 72.4
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 6.5e-81 305.1 285 57.2
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 7.4e-77 291.6 283 54.8
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 9.1e-67 258.1 212 61.3
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 1.7e-60 237.3 295 47.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 9.5e-48 194.9 128 77.3
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 4.9e-36 156.0 121 62.8
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 3.6e-31 139.8 269 35.3
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.4e-30 137.9 112 58.9
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.5e-29 132.1 102 62.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.5e-24 117.9 115 53.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 3.3e-24 116.7 116 53.4
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.6e-24 115.9 102 58.8
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 6.2e-23 112.5 354 28.0
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.4e-22 110.5 62 79.0
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 9.9e-21 105.1 71 73.2
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.0e-17 95.1 313 26.5
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.6e-13 80.5 62 59.7


User provided reference genes

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