Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04831_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 1.2e-54 216.9 160 100.0
Ca_16016_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 4.6e-35 151.8 149 88.6
TPR.G34770 Trifolium pratense HOM05D000818 ORTHO05D001324 3.0e-34 149.1 154 82.5
Psat2g153320 Pisum sativum HOM05D000818 ORTHO05D001324 7.3e-33 144.4 154 81.8
Medtr5g022530 Medicago truncatula HOM05D000818 ORTHO05D001324 1.4e-31 140.2 151 80.8
Ca_24918_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 9.9e-30 134.0 73 94.5
Lj2g0011602 Lotus japonicus HOM05D000818 ORTHO05D001324 1.1e-25 120.6 141 72.3
Glyma.11G078500 Glycine max HOM05D000818 ORTHO05D001324 9.0e-23 110.9 151 62.9
Phvul.002G106900 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 1.9e-20 103.2 147 48.3
Glyma.01G164500 Glycine max HOM05D000818 ORTHO05D001324 9.3e-20 100.9 118 62.7
VMungo1215G2524 Vigna mungo HOM05D000818 ORTHO05D001324 4.6e-19 98.6 120 60.0
arahy.Tifrunner.gnm1.ann1.BEDW22 Arachis hypogaea HOM05D000818 ORTHO05D001324 3.0e-18 95.9 125 74.4
arahy.Tifrunner.gnm1.ann1.FVJ9QC Arachis hypogaea HOM05D000818 ORTHO05D001324 3.0e-18 95.9 125 74.4
TWI09G1447 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 6.7e-18 94.7 149 47.7
Duzib187G1541 Durio zibethinus HOM05D000818 ORTHO05D001324 1.1e-17 94.0 117 44.4
TAR628G1292 Trochodendron aralioides HOM05D000818 ORTHO05D001324 1.5e-17 93.6 108 50.0
Lalb_Chr16g0377441 Lupinus albus HOM05D000818 ORTHO05D001324 2.5e-17 92.8 119 71.4
Thecc.01G015000 Theobroma cacao HOM05D000818 ORTHO05D001324 4.3e-17 92.0 117 45.3
Gorai.007G049300 Gossypium raimondii HOM05D000818 ORTHO05D001324 5.6e-17 91.7 146 47.9
Cfa006998 Carpinus fangiana HOM05D000818 ORTHO05D001324 9.6e-17 90.9 154 48.1
Gohir.D11G046000 Gossypium hirsutum HOM05D000818 ORTHO05D001324 9.6e-17 90.9 146 47.3
CANSAT25G2656 Cannabis sativa HOM05D000818 ORTHO05D001324 1.3e-16 90.5 146 48.6
Gohir.A11G042500 Gossypium hirsutum HOM05D000818 ORTHO05D001324 2.1e-16 89.7 116 44.0
Duzib264G1309 Durio zibethinus HOM05D000818 ORTHO05D001324 2.8e-16 89.4 117 42.7
Lalb_Chr05g0212281 Lupinus albus HOM05D000818 ORTHO05D001324 2.8e-16 89.4 143 44.8
Haze_03734 Corylus avellana HOM05D000818 ORTHO05D001324 4.8e-16 88.6 154 48.1
Duzib147G1443 Durio zibethinus HOM05D000818 ORTHO05D001324 4.8e-16 88.6 73 60.3
Nn6g32006 Nelumbo nucifera HOM05D000818 ORTHO05D001324 6.2e-16 88.2 73 61.6
Manes.02G105700 Manihot esculenta HOM05D000818 ORTHO05D001324 1.1e-15 87.4 147 44.9
Lalb_Chr09g0321621 Lupinus albus HOM05D000818 ORTHO05D001324 1.4e-15 87.0 121 73.6
GSVIVG01018739001 Vitis vinifera HOM05D000818 ORTHO05D001324 2.4e-15 86.3 63 66.7
Prupe.7G171300 Prunus persica HOM05D000818 ORTHO05D001324 4.0e-15 85.5 123 43.9
FAN28G1188 Fragaria x ananassa HOM05D000818 ORTHO05D001324 6.9e-15 84.7 120 53.3
Manes.01G147200 Manihot esculenta HOM05D000818 ORTHO05D001324 6.9e-15 84.7 77 55.8
Nn5g30763 Nelumbo nucifera HOM05D000818 ORTHO05D001324 6.9e-15 84.7 69 63.8
FvH4_1g11480 Fragaria vesca HOM05D000818 ORTHO05D001324 9.0e-15 84.3 120 54.2
FAN26G3190 Fragaria x ananassa HOM05D000818 ORTHO05D001324 9.0e-15 84.3 120 52.5
COL.COLO4_22458 Corchorus olitorius HOM05D000818 ORTHO05D001324 1.2e-14 84.0 115 44.3
Rhsim08G0032200 Rhododendron simsii HOM05D000818 ORTHO05D001324 1.2e-14 84.0 120 42.5
ClCG01G020450 Citrullus lanatus HOM05D000818 ORTHO05D001324 3.4e-14 82.4 118 43.2
RcHm_v2.0_Chr2g0099091 Rosa chinensis HOM05D000818 ORTHO05D001324 3.4e-14 82.4 68 61.8
FAN19G1188 Fragaria x ananassa HOM05D000818 ORTHO05D001324 4.5e-14 82.0 120 57.5
Sed0002852 Sechium edule HOM05D000818 ORTHO05D001324 5.8e-14 81.6 118 42.4
PSO675G0382 Papaver somniferum HOM05D000818 ORTHO05D001324 7.6e-14 81.3 138 56.5
TAR376G0771 Trochodendron aralioides HOM05D000818 ORTHO05D001324 7.6e-14 81.3 117 41.9
Eucgr.J02464 Eucalyptus grandis HOM05D000818 ORTHO05D001324 1.3e-13 80.5 123 43.1
CiPaw.07G060800 Carya illinoinensis HOM05D000818 ORTHO05D001324 1.7e-13 80.1 152 67.1
Aqoxy6G02199 Aquilegia oxysepala HOM05D000818 ORTHO05D001324 2.9e-13 79.3 105 44.8
MELO3C007924.2 Cucumis melo HOM05D000818 ORTHO05D001324 3.8e-13 79.0 74 59.5
QL06p051059 Quercus lobata HOM05D000818 ORTHO05D001324 3.8e-13 79.0 154 50.6
CsaV3_6G047330 Cucumis sativus L. HOM05D000818 ORTHO05D001324 4.9e-13 78.6 61 67.2
MBI09_g03718_MAGBIO Magnolia biondii HOM05D000818 ORTHO05D001324 4.9e-13 78.6 108 47.2
Dinv40114 Davidia involucrata HOM05D000818 ORTHO05D001324 1.4e-12 77.0 75 53.3
AT3G51290 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 1.9e-12 76.6 126 51.6
THA.LOC109116899 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 4.2e-12 75.5 129 45.7
Carub.0005s1766 Capsella rubella HOM05D000818 ORTHO05D001324 1.2e-11 73.9 128 56.2
vmacro18425 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 1.6e-11 73.6 118 39.0
BolC8t50270H Brassica oleracea HOM05D000818 ORTHO05D001324 2.1e-11 73.2 124 59.7
Potri.007G056700 Populus trichocarpa HOM05D000818 ORTHO05D001324 2.1e-11 73.2 122 60.7
Sabra07G0048600 Salix brachista HOM05D000818 ORTHO05D001324 2.1e-11 73.2 122 45.1
CSS0045830 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 3.5e-11 72.4 119 58.8
CiPaw.08G130300 Carya illinoinensis HOM05D000818 ORTHO05D001324 3.5e-11 72.4 146 52.1
ECA232G2709 Erigeron canadensis HOM05D000818 ORTHO05D001324 3.5e-11 72.4 120 49.2
CARHR160870 Cardamine hirsuta HOM05D000818 ORTHO05D001324 4.6e-11 72.0 126 65.1
Cc07_g11030 Coffea canephora HOM05D000818 ORTHO05D001324 4.6e-11 72.0 112 58.0
THA.LOC104821337 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 6.1e-11 71.6 129 42.6
MD15G1242800 Malus domestica HOM05D000818 ORTHO05D001324 1.0e-10 70.9 60 63.3
Sp5g10930 Schrenkiella parvula HOM05D000818 ORTHO05D001324 1.0e-10 70.9 130 57.7
Lj2C480T4 Lonicera japonica HOM05D000818 ORTHO05D001324 1.3e-10 70.5 63 57.1
A09p44340 Brassica napus HOM05D000818 ORTHO05D001324 1.8e-10 70.1 72 52.8
C08p26570 Brassica napus HOM05D000818 ORTHO05D001324 1.8e-10 70.1 72 52.8
BraA09t39895Z Brassica rapa HOM05D000818 ORTHO05D001324 1.8e-10 70.1 72 52.8
PSO293G0003 Papaver somniferum HOM05D000818 ORTHO05D001324 1.8e-10 70.1 46 73.9
Aa31LG4G19290 Aethionema arabicum HOM05D000818 ORTHO05D001324 3.9e-10 68.9 109 57.8
Thhalv10010132m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 3.9e-10 68.9 129 55.0
Hund16501 Selenicereus undatus HOM05D000818 ORTHO05D001324 3.9e-10 68.9 104 50.0
Lsat_1_v5_gn_4_145681 Lactuca sativa HOM05D000818 ORTHO05D001324 5.1e-10 68.6 122 35.2
Peaxi162Scf00328g00619 Petunia axillaris HOM05D000818 ORTHO05D001324 5.1e-10 68.6 56 60.7
Sabra05G0092200 Salix brachista HOM05D000818 ORTHO05D001324 5.1e-10 68.6 122 56.6
Ciclev10025182m.g Citrus clementina HOM05D000818 ORTHO05D001324 6.7e-10 68.2 138 40.6
Oeu014559.1 Olea europaea HOM05D000818 ORTHO05D001324 6.7e-10 68.2 129 34.9
Potri.005G112300 Populus trichocarpa HOM05D000818 ORTHO05D001324 6.7e-10 68.2 109 62.4
Atru.chr3.851 Acer truncatum HOM05D000818 ORTHO05D001324 8.7e-10 67.8 55 58.2
Actinidia10553 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.1e-09 67.4 105 72.4
Actinidia28715 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.1e-09 67.4 105 72.4
AL5G31710 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 1.1e-09 67.4 126 54.8
HanXRQChr13g0414601 Helianthus annuus HOM05D000818 ORTHO05D001324 1.1e-09 67.4 68 52.9
SalBow3G3960 Salvia bowleyana HOM05D000818 ORTHO05D001324 1.1e-09 67.4 115 36.5
Solyc02g083610.4 Solanum lycopersicum HOM05D000818 ORTHO05D001324 1.9e-09 66.6 117 62.4
Sopen02g028390 Solanum pennellii HOM05D000818 ORTHO05D001324 1.9e-09 66.6 117 62.4
Dinv33652 Davidia involucrata HOM05D000818 ORTHO05D001324 2.5e-09 66.2 96 39.6
ATR0712G148 Amborella trichopoda HOM05D000818 ORTHO05D001324 3.3e-09 65.9 56 55.4
MSTRG.15580 Avicennia marina HOM05D000818 ORTHO05D001324 4.3e-09 65.5 55 60.0
BcaB01g00534 Brassica carinata HOM05D000818 ORTHO05D001324 4.3e-09 65.5 67 53.7
Migut.H02177 Erythranthe guttata HOM05D000818 ORTHO05D001324 5.7e-09 65.1 57 61.4
Gohir.A02G172200 Gossypium hirsutum HOM05D000818 ORTHO05D001324 7.4e-09 64.7 106 40.6
Gohir.D03G007900 Gossypium hirsutum HOM05D000818 ORTHO05D001324 9.7e-09 64.3 101 48.5
DCAR_014036 Daucus carota HOM05D000818 ORTHO05D001324 1.3e-08 63.9 117 35.0
Lsat_1_v5_gn_2_75801 Lactuca sativa HOM05D000818 ORTHO05D001324 1.3e-08 63.9 68 50.0
EL10Ac6g15526 Beta vulgaris HOM05D000818 ORTHO05D001324 2.2e-08 63.2 80 46.2
Gorai.003G008100 Gossypium raimondii HOM05D000818 ORTHO05D001324 2.2e-08 63.2 101 48.5
unitig_699.g19704 Utricularia gibba HOM05D000818 ORTHO05D001324 2.2e-08 63.2 41 78.0
Nitab4.5_0022827g0010 Nicotiana tabacum HOM05D000818 ORTHO05D001324 2.8e-08 62.8 62 53.2
AUR62003341 Chenopodium quinoa HOM05D000818 ORTHO05D001324 4.8e-08 62.0 58 56.9
FAN23G2076 Fragaria x ananassa HOM05D000818 ORTHO05D001324 8.2e-08 61.2 94 40.4
Nitab4.5_0003187g0060 Nicotiana tabacum HOM05D000818 ORTHO05D001324 8.2e-08 61.2 62 53.2
SGA_v2.0_scaffold2G00967 Striga asiatica HOM05D000818 ORTHO05D001324 1.1e-07 60.8 105 59.0
AUR62029496 Chenopodium quinoa HOM05D000818 ORTHO05D001324 1.4e-07 60.5 58 55.2
HPP92_004935 Vanilla planifolia HOM05D000818 ORTHO05D001324 2.4e-07 59.7 138 39.9
Ah.03g149100 Amaranthus hybridus HOM05D000818 ORTHO05D001324 3.1e-07 59.3 43 67.4
ECA238G3985 Erigeron canadensis HOM05D000818 ORTHO05D001324 4.1e-07 58.9 44 61.4
HanXRQChr14g0441791 Helianthus annuus HOM05D000818 ORTHO05D001324 4.1e-07 58.9 42 64.3
MSTRG.23398 Avicennia marina HOM05D000818 ORTHO05D001324 1.2e-06 57.4 123 34.1
CDE05G2244 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 1.5e-06 57.0 51 54.9
Sc16g0001990 Simmondsia chinensis HOM05D000818 ORTHO05D001324 2.0e-06 56.6 56 55.4
Actinidia39599 Actinidia chinensis HOM05D000818 ORTHO05D001324 4.5e-06 55.5 75 37.3
CDE05G1017 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 4.5e-06 55.5 62 45.2
CDE05G2059 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 5.9e-06 55.1 36 72.2


User provided reference genes

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